RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeastyeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPE1YKL184W ODC2Q99297 307 aa1.15□□□□□ -2.23
SPE1YKL184W FMP27Q06179 2628 aa1.14□□□□□ -2.23
SPE1YKL184W SEN1Q00416 2231 aaKnown RBP1.14□□□□□ -2.23
SPE1YKL184W GCY1P14065 312 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23not detected
SPE1YKL184W UBC6P33296 250 aaPredicted RBP1.14□□□□□ -2.23
SPE1YKL184W YER134CP40081 178 aa1.14□□□□□ -2.23
SPE1YKL184W UBC12P52491 188 aa1.14□□□□□ -2.23
SPE1YKL184W MPC3P53311 146 aa1.14□□□□□ -2.23
SPE1YKL184W NRK1P53915 240 aa1.14□□□□□ -2.23
SPE1YKL184W MZM1Q03429 123 aaPredicted RBP1.14□□□□□ -2.23
SPE1YKL184W YLR162WQ06235 118 aa1.14□□□□□ -2.23
SPE1YKL184W ANT1Q06497 328 aa1.14□□□□□ -2.23
SPE1YKL184W YET3Q07451 203 aa1.14□□□□□ -2.23
SPE1YKL184W YDR524C-BQ3E6R4 66 aa1.14□□□□□ -2.23
SPE1YKL184W TOR1P35169 2470 aa1.13□□□□□ -2.23
SPE1YKL184W YAR023CD6VPM8 179 aa1.13□□□□□ -2.23
SPE1YKL184W SPO13P23624 291 aa1.13□□□□□ -2.23
SPE1YKL184W SEC14P24280 304 aaKnown RBP1.13□□□□□ -2.23
SPE1YKL184W TMA19P35691 167 aaKnown RBP1.13□□□□□ -2.23
SPE1YKL184W SHE2P36068 246 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23not detected
SPE1YKL184W ETR1P38071 380 aa1.13□□□□□ -2.23
SPE1YKL184W AIM18P38884 321 aa1.13□□□□□ -2.23
SPE1YKL184W MTW1P39731 289 aa1.13□□□□□ -2.23
SPE1YKL184W SKI6P46948 246 aaPredicted RBP1.13□□□□□ -2.23
SPE1YKL184W TMA22P47089 198 aaPredicted RBP1.13□□□□□ -2.23
SPE1YKL184W TIM13P53299 105 aa1.13□□□□□ -2.23
SPE1YKL184W RPL22BP56628 122 aaKnown RBP1.13□□□□□ -2.23
SPE1YKL184W SWC7Q06707 132 aa1.13□□□□□ -2.23
SPE1YKL184W YLR053CQ12026 108 aa1.13□□□□□ -2.23
SPE1YKL184W OCA6Q12454 224 aa1.13□□□□□ -2.23
SPE1YKL184W YMR030W-AQ3E760 96 aa1.13□□□□□ -2.23
SPE1YKL184W YPR014CQ6B0W2 109 aa1.13□□□□□ -2.23
SPE1YKL184W YLR422WQ06409 1932 aa1.12□□□□□ -2.23
SPE1YKL184W SRP14P38985 146 aa1.12□□□□□ -2.23
SPE1YKL184W EDC3P39998 551 aaKnown RBP1.12□□□□□ -2.23
SPE1YKL184W YPL073CP40323 161 aa1.12□□□□□ -2.23
SPE1YKL184W POP3P53833 195 aaPredicted RBP1.12□□□□□ -2.23
SPE1YKL184W DYN3Q04949 312 aa1.12□□□□□ -2.23
SPE1YKL184W YPR174CQ06616 221 aaPredicted RBP1.12□□□□□ -2.23
SPE1YKL184W YOR342CQ12182 319 aa1.12□□□□□ -2.23
SPE1YKL184W YDL085C-AQ3E7B7 68 aaKnown RBP1.12□□□□□ -2.23
SPE1YKL184W RIF1P29539 1916 aa1.11□□□□□ -2.23
SPE1YKL184W QCR6P00127 147 aa1.11□□□□□ -2.23
SPE1YKL184W HAP2P06774 265 aa1.11□□□□□ -2.23
SPE1YKL184W SEC11P15367 167 aa1.11□□□□□ -2.23
SPE1YKL184W YGL010WP25338 174 aa1.11□□□□□ -2.23
SPE1YKL184W PTC1P35182 281 aa1.11□□□□□ -2.23
SPE1YKL184W PAM17P36147 197 aa1.11□□□□□ -2.23
SPE1YKL184W YEL028WP39989 153 aa1.11□□□□□ -2.23
SPE1YKL184W YER076CP40049 302 aa1.11□□□□□ -2.23
SPE1YKL184W RPL13BP40212 199 aaKnown RBP1.11□□□□□ -2.23
SPE1YKL184W SBH1P52870 82 aa1.11□□□□□ -2.23
SPE1YKL184W YNL247WP53852 767 aaKnown RBP1.11□□□□□ -2.23
SPE1YKL184W DIG2Q03373 323 aaKnown RBP1.11□□□□□ -2.23
SPE1YKL184W FMN1Q03778 218 aa1.11□□□□□ -2.23
SPE1YKL184W CSN9Q03981 162 aa1.11□□□□□ -2.23
SPE1YKL184W SHH4Q06236 168 aa1.11□□□□□ -2.23
SPE1YKL184W IRC23Q08416 157 aa1.11□□□□□ -2.23
SPE1YKL184W YDL180WQ12301 547 aa1.11□□□□□ -2.23
SPE1YKL184W RPL13AQ12690 199 aaPredicted RBP1.11□□□□□ -2.23
SPE1YKL184W EFG1Q3E705 233 aaKnown RBP1.11□□□□□ -2.23
SPE1YKL184W GPA2P10823 449 aa1.1□□□□□ -2.23
SPE1YKL184W FPR1P20081 114 aaKnown RBP1.1□□□□□ -2.23
SPE1YKL184W YCR099CP25657 155 aa1.1□□□□□ -2.23
SPE1YKL184W RPC19P28000 142 aaKnown RBP1.1□□□□□ -2.23
SPE1YKL184W TRR1P29509 319 aaKnown RBP1.1□□□□□ -2.23
SPE1YKL184W ECM4P36156 370 aa1.1□□□□□ -2.23
SPE1YKL184W PDX3P38075 228 aaKnown RBP1.1□□□□□ -2.23
SPE1YKL184W VMA22P38784 181 aa1.1□□□□□ -2.23
SPE1YKL184W YER135CP40082 130 aa1.1□□□□□ -2.23
SPE1YKL184W POG1P40473 351 aa1.1□□□□□ -2.23
SPE1YKL184W HPM1P40481 377 aa1.1□□□□□ -2.23
SPE1YKL184W CUP9P41817 306 aa1.1□□□□□ -2.23
SPE1YKL184W GPI14P47088 403 aaKnown RBP1.1□□□□□ -2.23
SPE1YKL184W PIR1Q03178 341 aa1.1□□□□□ -2.23
SPE1YKL184W VPS71Q03433 280 aa1.1□□□□□ -2.23
SPE1YKL184W SPC24Q04477 213 aa1.1□□□□□ -2.23
SPE1YKL184W SHH3Q04487 196 aa1.1□□□□□ -2.23
SPE1YKL184W YMR253CQ04835 414 aa1.1□□□□□ -2.23
SPE1YKL184W YPR202WQ08993 238 aa1.1□□□□□ -2.23
SPE1YKL184W PEX11Q12462 236 aa1.1□□□□□ -2.23
SPE1YKL184W YKL018C-AQ3E7A7 99 aa1.1□□□□□ -2.23
SPE1YKL184W LAA1P39526 2014 aa1.1□□□□□ -2.23
SPE1YKL184W RPL2AP0CX45 254 aaKnown RBP1.09□□□□□ -2.23
SPE1YKL184W RPL2BP0CX46 254 aaKnown RBP1.09□□□□□ -2.23
SPE1YKL184W AHC2P25649 128 aa1.09□□□□□ -2.23
SPE1YKL184W YKR041WP36134 250 aa1.09□□□□□ -2.23
SPE1YKL184W YBR220CP38318 560 aa1.09□□□□□ -2.23
SPE1YKL184W YFL019CP43576 117 aa1.09□□□□□ -2.23
SPE1YKL184W EMC4P53073 190 aa1.09□□□□□ -2.23
SPE1YKL184W YIP3P53633 176 aa1.09□□□□□ -2.23
SPE1YKL184W RCF2P53721 224 aa1.09□□□□□ -2.23
SPE1YKL184W TLG1Q03322 224 aa1.09□□□□□ -2.23
SPE1YKL184W YDR476CQ03362 224 aa1.09□□□□□ -2.23
SPE1YKL184W YHR007C-AQ07074 71 aa1.09□□□□□ -2.23
SPE1YKL184W FYV12Q08559 129 aa1.09□□□□□ -2.23
SPE1YKL184W YLR046CQ12253 270 aa1.09□□□□□ -2.23
SPE1YKL184W TEL1P38110 2787 aa1.09□□□□□ -2.24
SPE1YKL184W MSB2P32334 1306 aa1.08□□□□□ -2.24
SPE1YKL184W NUM1Q00402 2748 aa1.08□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 102.4 ms