RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN4YKL062W TIM9O74700 87 aa3.11□□□□□ -1.91
MSN4YKL062W UBC5P15732 148 aa3.11□□□□□ -1.91
MSN4YKL062W DDR48P18899 430 aaKnown RBP3.11□□□□□ -1.91
MSN4YKL062W SDH4P37298 181 aa3.11□□□□□ -1.91
MSN4YKL062W RFS1P38234 210 aaKnown RBP3.11□□□□□ -1.91
MSN4YKL062W PTH1P38876 190 aaKnown RBP3.11□□□□□ -1.91
MSN4YKL062W YMR252CQ04814 134 aa3.11□□□□□ -1.91
MSN4YKL062W IRC25Q07951 179 aa3.11□□□□□ -1.91
MSN4YKL062W YCR075W-AQ3E830 75 aa3.11□□□□□ -1.91
MSN4YKL062W REV3P14284 1504 aa3.1□□□□□ -1.91
MSN4YKL062W SFT2P38166 215 aa3.1□□□□□ -1.91
MSN4YKL062W YAR029WP39549 74 aa3.1□□□□□ -1.91
MSN4YKL062W IGD1P43598 195 aa3.1□□□□□ -1.91
MSN4YKL062W EAF6P47128 113 aa3.1□□□□□ -1.91
MSN4YKL062W BAT2P47176 376 aaKnown RBP3.1□□□□□ -1.91
MSN4YKL062W YGL194C-AQ2V2P6 80 aa3.1□□□□□ -1.91
MSN4YKL062W YAL067W-AQ8TGK6 75 aa3.1□□□□□ -1.91
MSN4YKL062W KRE5P22023 1365 aa3.1□□□□□ -1.91
MSN4YKL062W YEL009C-AA0A023PZF2 135 aa3.09□□□□□ -1.91
MSN4YKL062W NOP1P15646 327 aaKnown RBP3.09□□□□□ -1.91
MSN4YKL062W GPI18P38211 433 aa3.09□□□□□ -1.91
MSN4YKL062W YER135CP40082 130 aa3.09□□□□□ -1.91
MSN4YKL062W YIL054WP40524 105 aa3.09□□□□□ -1.91
MSN4YKL062W GON7P46984 123 aa3.09□□□□□ -1.91
MSN4YKL062W SYM1Q06563 197 aa3.09□□□□□ -1.91
MSN4YKL062W ATP20Q12233 115 aa3.09□□□□□ -1.91
MSN4YKL062W ISD11Q6Q560 94 aa3.09□□□□□ -1.91
MSN4YKL062W HYP2P23301 157 aaKnown RBP3.09□□□□□ -1.92
MSN4YKL062W SRL3P36167 246 aa3.09□□□□□ -1.92
MSN4YKL062W RRT13P40042 185 aa3.09□□□□□ -1.92
MSN4YKL062W CAX4P53223 239 aa3.09□□□□□ -1.92
MSN4YKL062W SMD1Q02260 146 aaPredicted RBP3.09□□□□□ -1.92
MSN4YKL062W ODC2Q99297 307 aa3.09□□□□□ -1.92
MSN4YKL062W SAS5Q99314 248 aa3.09□□□□□ -1.92
MSN4YKL062W DDP1Q99321 188 aaKnown RBP3.09□□□□□ -1.92
MSN4YKL062W CPA1P07258 411 aaKnown RBP3.08□□□□□ -1.92
MSN4YKL062W COX10P21592 462 aa3.08□□□□□ -1.92
MSN4YKL062W PRE1P22141 198 aaKnown RBP3.08□□□□□ -1.92
MSN4YKL062W YCR050CP25630 102 aa3.08□□□□□ -1.92
MSN4YKL062W ERV15P38312 142 aa3.08□□□□□ -1.92
MSN4YKL062W CTR2P38865 189 aa3.08□□□□□ -1.92
MSN4YKL062W ARC15P40518 154 aaRIP-Chip data3.08□□□□□ -1.92not detected
MSN4YKL062W REE1P40893 198 aa3.08□□□□□ -1.92
MSN4YKL062W YOR097CQ12274 175 aaPredicted RBP3.08□□□□□ -1.92
MSN4YKL062W YOR376W-AQ3E805 51 aa3.08□□□□□ -1.92
MSN4YKL062W DUR1,2P32528 1835 aaKnown RBP3.07□□□□□ -1.92
MSN4YKL062W POR1P04840 283 aaKnown RBP3.07□□□□□ -1.92
MSN4YKL062W PEX4P29340 183 aa3.07□□□□□ -1.92
MSN4YKL062W SWD3P38123 315 aa3.07□□□□□ -1.92
MSN4YKL062W YHR125WP38831 101 aa3.07□□□□□ -1.92
MSN4YKL062W NSA2P40078 261 aaKnown RBP3.07□□□□□ -1.92
MSN4YKL062W CUP9P41817 306 aa3.07□□□□□ -1.92
MSN4YKL062W FCF1Q05498 189 aaPredicted RBP3.07□□□□□ -1.92
MSN4YKL062W UPS1Q05776 175 aa3.07□□□□□ -1.92
MSN4YKL062W RAD6P06104 172 aa3.07□□□□□ -1.92
MSN4YKL062W ARO2P28777 376 aaKnown RBP3.07□□□□□ -1.92
MSN4YKL062W PAM16P42949 149 aa3.07□□□□□ -1.92
MSN4YKL062W GNA1P43577 159 aaPredicted RBP3.07□□□□□ -1.92
MSN4YKL062W LSM8P47093 109 aaKnown RBP3.07□□□□□ -1.92
MSN4YKL062W RCE1Q03530 315 aa3.07□□□□□ -1.92
MSN4YKL062W GTT2Q12390 233 aa3.07□□□□□ -1.92
MSN4YKL062W YOL085CQ99345 113 aa3.07□□□□□ -1.92
MSN4YKL062W FLO11P08640 1367 aa3.06□□□□□ -1.92
MSN4YKL062W TRM3Q07527 1436 aa3.06□□□□□ -1.92
MSN4YKL062W UMP1P38293 148 aa3.06□□□□□ -1.92
MSN4YKL062W SPC25P40014 221 aa3.06□□□□□ -1.92
MSN4YKL062W NSE4P43124 402 aa3.06□□□□□ -1.92
MSN4YKL062W DSK2P48510 373 aa3.06□□□□□ -1.92
MSN4YKL062W YMR103CQ04436 120 aa3.06□□□□□ -1.92
MSN4YKL062W RSM27P53305 110 aa3.05□□□□□ -1.92
MSN4YKL062W MPC3P53311 146 aa3.05□□□□□ -1.92
MSN4YKL062W HAP3P13434 144 aa3.05□□□□□ -1.92
MSN4YKL062W YEL045CP32616 141 aa3.05□□□□□ -1.92
MSN4YKL062W RRT1P38192 103 aa3.05□□□□□ -1.92
MSN4YKL062W YAL064WP39711 94 aa3.05□□□□□ -1.92
MSN4YKL062W YNR064CP53750 290 aa3.05□□□□□ -1.92
MSN4YKL062W MRPS8Q03799 155 aa3.05□□□□□ -1.92
MSN4YKL062W PIN3Q06449 215 aa3.05□□□□□ -1.92
MSN4YKL062W RAD10P06838 210 aa3.04□□□□□ -1.92
MSN4YKL062W MDH2P22133 377 aa3.04□□□□□ -1.92
MSN4YKL062W SNU13P39990 126 aaKnown RBP3.04□□□□□ -1.92
MSN4YKL062W SMD3P43321 101 aaKnown RBP3.04□□□□□ -1.92
MSN4YKL062W ECO1P43605 281 aa3.04□□□□□ -1.92
MSN4YKL062W SAY1P53324 424 aa3.04□□□□□ -1.92
MSN4YKL062W RIM9Q04734 239 aa3.04□□□□□ -1.92
MSN4YKL062W CSI2Q08054 341 aa3.04□□□□□ -1.92
MSN4YKL062W YPR063CQ12160 140 aa3.04□□□□□ -1.92
MSN4YKL062W MSW1P04803 379 aa3.03□□□□□ -1.92
MSN4YKL062W GAA1P39012 614 aa3.03□□□□□ -1.92
MSN4YKL062W KEI1Q06346 221 aa3.03□□□□□ -1.92
MSN4YKL062W RRT7Q07829 113 aa3.03□□□□□ -1.92
MSN4YKL062W RPL13AQ12690 199 aaPredicted RBP3.03□□□□□ -1.92
MSN4YKL062W YHR032W-AP0C5N6 59 aa3.03□□□□□ -1.93
MSN4YKL062W YET1P35723 206 aa3.03□□□□□ -1.93
MSN4YKL062W YHR130CP38834 111 aa3.03□□□□□ -1.93
MSN4YKL062W CCS1P40202 249 aaKnown RBP3.03□□□□□ -1.93
MSN4YKL062W YGR164WP53291 111 aa3.03□□□□□ -1.93
MSN4YKL062W FEX1Q08913 375 aa3.03□□□□□ -1.93
MSN4YKL062W FEX2Q08991 375 aa3.03□□□□□ -1.93
MSN4YKL062W MED11Q99278 115 aa3.03□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms