RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C YMR030W-AQ3E760 96 aa1.28□□□□□ -2.2
VPS25YJR102C PAC10P48363 199 aa1.27□□□□□ -2.21
VPS25YJR102C TMA20P89886 181 aaPredicted RBP1.27□□□□□ -2.21
VPS25YJR102C RIM9Q04734 239 aa1.27□□□□□ -2.21
VPS25YJR102C YER121WP40076 114 aa1.26□□□□□ -2.21
VPS25YJR102C YLR053CQ12026 108 aa1.26□□□□□ -2.21
VPS25YJR102C TRM3Q07527 1436 aa1.25□□□□□ -2.21
VPS25YJR102C RAD6P06104 172 aa1.25□□□□□ -2.21
VPS25YJR102C UBC8P28263 218 aa1.25□□□□□ -2.21
VPS25YJR102C ETR1P38071 380 aa1.25□□□□□ -2.21
VPS25YJR102C YBR242WP38331 238 aa1.25□□□□□ -2.21
VPS25YJR102C YEL073CP39974 107 aa1.25□□□□□ -2.21
VPS25YJR102C CCS1P40202 249 aaKnown RBP1.25□□□□□ -2.21
VPS25YJR102C YFL051CP43552 160 aa1.25□□□□□ -2.21
VPS25YJR102C NQM1P53228 333 aaPredicted RBP1.25□□□□□ -2.21
VPS25YJR102C THI74Q04083 370 aa1.25□□□□□ -2.21
VPS25YJR102C FIT1Q04433 528 aa1.25□□□□□ -2.21
VPS25YJR102C HRD1Q08109 551 aa1.25□□□□□ -2.21
VPS25YJR102C RDI1Q12434 202 aa1.25□□□□□ -2.21
VPS25YJR102C MOB1P40484 314 aa1.24□□□□□ -2.21
VPS25YJR102C CSH1P38287 376 aa1.23□□□□□ -2.21
VPS25YJR102C YHL037CP38733 133 aa1.23□□□□□ -2.21
VPS25YJR102C YGL101WP53144 215 aa1.23□□□□□ -2.21
VPS25YJR102C SYM1Q06563 197 aa1.23□□□□□ -2.21
VPS25YJR102C YPR203WQ08994 102 aa1.23□□□□□ -2.21
VPS25YJR102C QCR2P07257 368 aa1.22□□□□□ -2.21
VPS25YJR102C MAK3Q03503 176 aa1.22□□□□□ -2.21
VPS25YJR102C YML079WQ03629 201 aa1.22□□□□□ -2.21
VPS25YJR102C NSL1Q12143 216 aa1.22□□□□□ -2.21
VPS25YJR102C SRP102P36057 244 aaPredicted RBP1.21□□□□□ -2.22
VPS25YJR102C AME1P38313 324 aa1.21□□□□□ -2.22
VPS25YJR102C YEL028WP39989 153 aa1.21□□□□□ -2.22
VPS25YJR102C AIM36Q03798 255 aa1.21□□□□□ -2.22
VPS25YJR102C ATG10Q07879 167 aa1.21□□□□□ -2.22
VPS25YJR102C SPS2P08459 502 aa1.2□□□□□ -2.22
VPS25YJR102C YER188C-AP0C0V2 99 aa1.2□□□□□ -2.22
VPS25YJR102C UBC6P33296 250 aaPredicted RBP1.2□□□□□ -2.22
VPS25YJR102C LSM3P57743 89 aaKnown RBP1.2□□□□□ -2.22
VPS25YJR102C LIP1Q03579 150 aa1.2□□□□□ -2.22
VPS25YJR102C YDR102CQ03864 110 aa1.2□□□□□ -2.22
VPS25YJR102C YDL157CQ12082 118 aa1.2□□□□□ -2.22
VPS25YJR102C ATP5P09457 212 aa1.19□□□□□ -2.22
VPS25YJR102C UBI4P0CG63 381 aaKnown RBP1.19□□□□□ -2.22
VPS25YJR102C YGR269WP40326 108 aa1.19□□□□□ -2.22
VPS25YJR102C DLS1P40366 167 aa1.19□□□□□ -2.22
VPS25YJR102C YDR476CQ03362 224 aa1.19□□□□□ -2.22
VPS25YJR102C AVO2Q04749 426 aa1.19□□□□□ -2.22
VPS25YJR102C LCL2Q08045 131 aa1.19□□□□□ -2.22
VPS25YJR102C EFG1Q3E705 233 aaKnown RBP1.19□□□□□ -2.22
VPS25YJR102C INO4P13902 151 aa1.18□□□□□ -2.22
VPS25YJR102C PTC1P35182 281 aa1.18□□□□□ -2.22
VPS25YJR102C YPT31P38555 223 aaKnown RBP1.18□□□□□ -2.22
VPS25YJR102C YAR064WP39563 99 aa1.18□□□□□ -2.22
VPS25YJR102C ORM1P53224 222 aa1.18□□□□□ -2.22
VPS25YJR102C YPR114WQ06107 315 aa1.18□□□□□ -2.22
VPS25YJR102C RPS25BP0C0T4 108 aaKnown RBP1.17□□□□□ -2.22
VPS25YJR102C DER1P38307 211 aa1.17□□□□□ -2.22
VPS25YJR102C APQ12P40532 138 aa1.17□□□□□ -2.22
VPS25YJR102C YGL230CP53074 147 aa1.17□□□□□ -2.22
VPS25YJR102C YNR064CP53750 290 aa1.17□□□□□ -2.22
VPS25YJR102C YPD1Q07688 167 aa1.17□□□□□ -2.22
VPS25YJR102C UIP4Q08926 304 aa1.17□□□□□ -2.22
VPS25YJR102C YLR046CQ12253 270 aa1.17□□□□□ -2.22
VPS25YJR102C RPS25AQ3E792 108 aaPredicted RBP1.17□□□□□ -2.22
VPS25YJR102C RIF1P29539 1916 aa1.17□□□□□ -2.22
VPS25YJR102C QCR6P00127 147 aa1.16□□□□□ -2.22
VPS25YJR102C PBI2P0CT04 75 aaKnown RBP1.16□□□□□ -2.22
VPS25YJR102C RPL30P14120 105 aaKnown RBP1.16□□□□□ -2.22
VPS25YJR102C RME1P32338 300 aaKnown RBP1.16□□□□□ -2.22
VPS25YJR102C SLM6P38343 150 aa1.16□□□□□ -2.22
VPS25YJR102C HTD2P38790 280 aaKnown RBP1.16□□□□□ -2.22
VPS25YJR102C YIL102CP40488 101 aa1.16□□□□□ -2.22
VPS25YJR102C GLC8P41818 229 aa1.16□□□□□ -2.22
VPS25YJR102C DCV1P43595 202 aa1.16□□□□□ -2.22
VPS25YJR102C RPS28BP0C0X0 67 aaKnown RBP1.15□□□□□ -2.23
VPS25YJR102C PRE1P22141 198 aaKnown RBP1.15□□□□□ -2.23
VPS25YJR102C ARC19P33204 171 aaKnown RBP1.15□□□□□ -2.23
VPS25YJR102C SHB17P36136 271 aaKnown RBP1.15□□□□□ -2.23
VPS25YJR102C CCC1P47818 322 aa1.15□□□□□ -2.23
VPS25YJR102C SMD2Q06217 110 aaKnown RBP1.15□□□□□ -2.23
VPS25YJR102C RPS28AQ3E7X9 67 aaPredicted RBP1.15□□□□□ -2.23
VPS25YJR102C BUB2P26448 306 aaPredicted RBP1.14□□□□□ -2.23
VPS25YJR102C YKR070WP36151 352 aaKnown RBP1.14□□□□□ -2.23
VPS25YJR102C FIG1P38224 298 aa1.14□□□□□ -2.23
VPS25YJR102C YER181CP40097 107 aa1.14□□□□□ -2.23
VPS25YJR102C FIP1P45976 327 aa1.14□□□□□ -2.23
VPS25YJR102C YDL241WQ07738 123 aa1.14□□□□□ -2.23
VPS25YJR102C YPR202WQ08993 238 aa1.14□□□□□ -2.23
VPS25YJR102C CDC39P25655 2108 aaKnown RBP1.13□□□□□ -2.23
VPS25YJR102C SPT14P32363 452 aa1.13□□□□□ -2.23
VPS25YJR102C CIN5P40917 295 aa1.13□□□□□ -2.23
VPS25YJR102C APS3P47064 194 aa1.13□□□□□ -2.23
VPS25YJR102C CCW12Q12127 133 aa1.13□□□□□ -2.23
VPS25YJR102C FCY1Q12178 158 aa1.13□□□□□ -2.23
VPS25YJR102C KIN28P06242 306 aa1.12□□□□□ -2.23
VPS25YJR102C MRS4P23500 304 aa1.12□□□□□ -2.23
VPS25YJR102C PEX34P25584 144 aa1.12□□□□□ -2.23
VPS25YJR102C UGX2P32772 223 aa1.12□□□□□ -2.23
VPS25YJR102C YJR015WP47090 510 aa1.12□□□□□ -2.23
VPS25YJR102C GEP7P53171 287 aa1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms