RNA–Protein interactions for RNA: YJL172W

CPS1, Transcript of Vacuolar carboxypeptidase S, yeast

Gene CPS1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPS1	YJL172W	MRPS9	P38120	278 aa		4.18	□□□□□ -1.74
CPS1	YJL172W	GLE2	P40066	365 aa		4.18	□□□□□ -1.74
CPS1	YJL172W	YIL059C	P40520	121 aa		4.18	□□□□□ -1.74
CPS1	YJL172W	LCB3	P47013	409 aa		4.18	□□□□□ -1.74
CPS1	YJL172W	YGR149W	P48236	432 aa		4.18	□□□□□ -1.74
CPS1	YJL172W	PAU12	P53343	120 aa		4.18	□□□□□ -1.74
CPS1	YJL172W	AIM11	P87275	137 aa		4.18	□□□□□ -1.74
CPS1	YJL172W	ELP6	Q04868	273 aa		4.18	□□□□□ -1.74
CPS1	YJL172W	RDL2	Q08742	149 aa	Known RBP	4.18	□□□□□ -1.74
CPS1	YJL172W	YOR376W	Q08900	122 aa		4.18	□□□□□ -1.74
CPS1	YJL172W	RPL7B	Q12213	244 aa	Known RBP	4.18	□□□□□ -1.74
CPS1	YJL172W	FRE7	Q12333	620 aa		4.18	□□□□□ -1.74
CPS1	YJL172W	PCL9	Q12477	304 aa		4.18	□□□□□ -1.74
CPS1	YJL172W	HFA1	P32874	2273 aa		4.18	□□□□□ -1.74
CPS1	YJL172W	TOR1	P35169	2470 aa		4.17	□□□□□ -1.74
CPS1	YJL172W	COX1	P00401	534 aa		4.17	□□□□□ -1.74
CPS1	YJL172W	YSF3	P0C074	85 aa	Predicted RBP	4.17	□□□□□ -1.74
CPS1	YJL172W	IES6	P32617	166 aa		4.17	□□□□□ -1.74
CPS1	YJL172W	IRC22	P40006	225 aa		4.17	□□□□□ -1.74
CPS1	YJL172W	NSA2	P40078	261 aa	Known RBP	4.17	□□□□□ -1.74
CPS1	YJL172W	XBP1	P40489	647 aa		4.17	□□□□□ -1.74
CPS1	YJL172W	TRS23	Q03784	219 aa		4.17	□□□□□ -1.74
CPS1	YJL172W	STP4	Q07351	490 aa		4.17	□□□□□ -1.74
CPS1	YJL172W	PRM3	Q08931	133 aa		4.17	□□□□□ -1.74
CPS1	YJL172W	TEL1	P38110	2787 aa		4.17	□□□□□ -1.74
CPS1	YJL172W	RPL20A	P0CX23	172 aa	Known RBP	4.16	□□□□□ -1.74
CPS1	YJL172W	RPL20B	P0CX24	172 aa	Predicted RBP	4.16	□□□□□ -1.74
CPS1	YJL172W	COX10	P21592	462 aa		4.16	□□□□□ -1.74
CPS1	YJL172W	YCR007C	P25354	239 aa		4.16	□□□□□ -1.74
CPS1	YJL172W	SPS18	P32572	300 aa		4.16	□□□□□ -1.74
CPS1	YJL172W	ZRT1	P32804	376 aa		4.16	□□□□□ -1.74
CPS1	YJL172W	CUP9	P41817	306 aa		4.16	□□□□□ -1.74
CPS1	YJL172W	PAU5	P43575	122 aa		4.16	□□□□□ -1.74
CPS1	YJL172W	UBX6	P47049	396 aa		4.16	□□□□□ -1.74
CPS1	YJL172W	SBH1	P52870	82 aa		4.16	□□□□□ -1.74
CPS1	YJL172W	BRR6	P53062	197 aa		4.16	□□□□□ -1.74
CPS1	YJL172W	TPC1	P53257	314 aa		4.16	□□□□□ -1.74
CPS1	YJL172W	SMM1	P53720	384 aa	Known RBP	4.16	□□□□□ -1.74
CPS1	YJL172W	HSK3	P69852	69 aa		4.16	□□□□□ -1.74
CPS1	YJL172W	YMR252C	Q04814	134 aa		4.16	□□□□□ -1.74
CPS1	YJL172W	FCF1	Q05498	189 aa	Predicted RBP	4.16	□□□□□ -1.74
CPS1	YJL172W	ADH1	P00330	348 aa	Known RBP	4.15	□□□□□ -1.74
CPS1	YJL172W	CHO1	P08456	276 aa		4.15	□□□□□ -1.74
CPS1	YJL172W	RPL18A	P0CX49	186 aa	Known RBP	4.15	□□□□□ -1.74
CPS1	YJL172W	RPL18B	P0CX50	186 aa	Known RBP	4.15	□□□□□ -1.74
CPS1	YJL172W	YCR100C	P25606	316 aa		4.15	□□□□□ -1.74
CPS1	YJL172W	PAU2	P32612	120 aa		4.15	□□□□□ -1.74
CPS1	YJL172W	NNK1	P36003	928 aa		4.15	□□□□□ -1.74
CPS1	YJL172W	SNO3	P43544	222 aa		4.15	□□□□□ -1.74
CPS1	YJL172W	PRY1	P47032	299 aa		4.15	□□□□□ -1.74
CPS1	YJL172W	YGL262W	P53054	175 aa		4.15	□□□□□ -1.74
CPS1	YJL172W	DUG3	P53871	357 aa		4.15	□□□□□ -1.74
CPS1	YJL172W	COF1	Q03048	143 aa	Known RBP	4.15	□□□□□ -1.74
CPS1	YJL172W	NRG1	Q03125	231 aa		4.15	□□□□□ -1.74
CPS1	YJL172W	SPO24	Q3E752	67 aa		4.15	□□□□□ -1.74
CPS1	YJL172W	TEM1	P38987	245 aa		4.15	□□□□□ -1.75
CPS1	YJL172W	PHS1	P40857	217 aa		4.15	□□□□□ -1.75
CPS1	YJL172W	CTK2	P46962	323 aa		4.15	□□□□□ -1.75
CPS1	YJL172W	VHT1	P53241	593 aa		4.15	□□□□□ -1.75
CPS1	YJL172W	NCE101	Q02820	53 aa		4.15	□□□□□ -1.75
CPS1	YJL172W	YLR042C	Q07990	161 aa		4.15	□□□□□ -1.75
CPS1	YJL172W	SWM1	Q12379	170 aa		4.15	□□□□□ -1.75
CPS1	YJL172W	IRA1	P18963	3092 aa		4.14	□□□□□ -1.75
CPS1	YJL172W	RPL28	P02406	149 aa	Known RBP	4.14	□□□□□ -1.75
CPS1	YJL172W	RAD6	P06104	172 aa		4.14	□□□□□ -1.75
CPS1	YJL172W	CDC43	P18898	376 aa		4.14	□□□□□ -1.75
CPS1	YJL172W	LDB16	P25587	256 aa		4.14	□□□□□ -1.75
CPS1	YJL172W	CNE1	P27825	502 aa		4.14	□□□□□ -1.75
CPS1	YJL172W	PRE2	P30656	287 aa	Known RBP	4.14	□□□□□ -1.75
CPS1	YJL172W	MTC7	P32633	139 aa		4.14	□□□□□ -1.75
CPS1	YJL172W	ALK2	P32789	676 aa	Predicted RBP	4.14	□□□□□ -1.75
CPS1	YJL172W	ANS1	P38832	159 aa		4.14	□□□□□ -1.75
CPS1	YJL172W	DLS1	P40366	167 aa		4.14	□□□□□ -1.75
CPS1	YJL172W	MSL1	P40567	111 aa	Predicted RBP	4.14	□□□□□ -1.75
CPS1	YJL172W	GON7	P46984	123 aa		4.14	□□□□□ -1.75
CPS1	YJL172W	ADD37	Q03233	198 aa		4.14	□□□□□ -1.75
CPS1	YJL172W	INP1	Q03694	420 aa		4.14	□□□□□ -1.75
CPS1	YJL172W	YOR032W-A	Q8TGS1	66 aa		4.14	□□□□□ -1.75
CPS1	YJL172W	ARF1	P11076	181 aa	Known RBP	4.13	□□□□□ -1.75
CPS1	YJL172W	MRPL20	P22354	195 aa	Predicted RBP	4.13	□□□□□ -1.75
CPS1	YJL172W	YKL102C	P34249	101 aa		4.13	□□□□□ -1.75
CPS1	YJL172W	ECM33	P38248	429 aa	Known RBP	4.13	□□□□□ -1.75
CPS1	YJL172W	ECM34	P38728	170 aa		4.13	□□□□□ -1.75
CPS1	YJL172W	YNL198C	P40166	100 aa		4.13	□□□□□ -1.75
CPS1	YJL172W	BAT2	P47176	376 aa	Known RBP	4.13	□□□□□ -1.75
CPS1	YJL172W	YLR152C	P54072	576 aa		4.13	□□□□□ -1.75
CPS1	YJL172W	MRX11	Q03079	207 aa		4.13	□□□□□ -1.75
CPS1	YJL172W	RRT7	Q07829	113 aa		4.13	□□□□□ -1.75
CPS1	YJL172W	YOL024W	Q08172	172 aa		4.13	□□□□□ -1.75
CPS1	YJL172W	YDL211C	Q12121	372 aa		4.13	□□□□□ -1.75
CPS1	YJL172W	IZH2	Q12442	317 aa		4.13	□□□□□ -1.75
CPS1	YJL172W	KTI11	Q3E840	82 aa		4.13	□□□□□ -1.75
CPS1	YJL172W	YPL229W	Q99395	206 aa		4.13	□□□□□ -1.75
CPS1	YJL172W	FAS1	P07149	2051 aa	Known RBP	4.13	□□□□□ -1.75
CPS1	YJL172W	FMP49	A0A023PZB3	126 aa		4.12	□□□□□ -1.75
CPS1	YJL172W	COX9	P07255	59 aa		4.12	□□□□□ -1.75
CPS1	YJL172W	GAS1	P22146	559 aa	Known RBP	4.12	□□□□□ -1.75
CPS1	YJL172W	ERG24	P32462	438 aa	Known RBP	4.12	□□□□□ -1.75
CPS1	YJL172W	YJL193W	P39542	402 aa		4.12	□□□□□ -1.75
CPS1	YJL172W	VHS2	P40463	436 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms