RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C YOL118CQ08259 102 aa2.67□□□□□ -1.98
SDS3YIL084C IRC23Q08416 157 aa2.67□□□□□ -1.98
SDS3YIL084C TIM22Q12328 207 aa2.67□□□□□ -1.98
SDS3YIL084C UTR5P32630 166 aa2.66□□□□□ -1.98
SDS3YIL084C SUR2P38992 349 aa2.66□□□□□ -1.98
SDS3YIL084C FMP41P53889 259 aaKnown RBP2.66□□□□□ -1.98
SDS3YIL084C SRL4Q03085 281 aa2.66□□□□□ -1.98
SDS3YIL084C FIT1Q04433 528 aa2.66□□□□□ -1.98
SDS3YIL084C YMR252CQ04814 134 aa2.66□□□□□ -1.98
SDS3YIL084C PRS2P38620 318 aaKnown RBP2.65□□□□□ -1.99
SDS3YIL084C YER137CP40083 148 aaKnown RBP2.65□□□□□ -1.99
SDS3YIL084C FMC1P40491 155 aa2.65□□□□□ -1.99
SDS3YIL084C GAT4P40569 121 aa2.65□□□□□ -1.99
SDS3YIL084C GRX5Q02784 150 aa2.65□□□□□ -1.99
SDS3YIL084C YMD8Q03697 442 aa2.65□□□□□ -1.99
SDS3YIL084C FEX1Q08913 375 aa2.65□□□□□ -1.99
SDS3YIL084C FEX2Q08991 375 aa2.65□□□□□ -1.99
SDS3YIL084C ISD11Q6Q560 94 aa2.65□□□□□ -1.99
SDS3YIL084C MRP1P10662 321 aaKnown RBP2.64□□□□□ -1.99
SDS3YIL084C GRX2P17695 143 aaKnown RBP2.64□□□□□ -1.99
SDS3YIL084C BUD23P25627 275 aaPredicted RBP2.64□□□□□ -1.99
SDS3YIL084C VMA6P32366 345 aaKnown RBP2.64□□□□□ -1.99
SDS3YIL084C MRPL38P35996 138 aaPredicted RBP2.64□□□□□ -1.99
SDS3YIL084C YKR032WP36127 104 aa2.64□□□□□ -1.99
SDS3YIL084C BMT5P40493 336 aa2.64□□□□□ -1.99
SDS3YIL084C COG5P53951 403 aa2.64□□□□□ -1.99
SDS3YIL084C RRP17Q04031 235 aaPredicted RBP2.64□□□□□ -1.99
SDS3YIL084C LOA1Q06508 300 aa2.64□□□□□ -1.99
SDS3YIL084C SME1Q12330 94 aaPredicted RBP2.64□□□□□ -1.99
SDS3YIL084C TAR1Q8TGM6 124 aa2.64□□□□□ -1.99
SDS3YIL084C COX2P00410 251 aa2.63□□□□□ -1.99
SDS3YIL084C KRE1P17260 313 aa2.63□□□□□ -1.99
SDS3YIL084C CDC10P25342 322 aaKnown RBP2.63□□□□□ -1.99
SDS3YIL084C CPR5P35176 225 aa2.63□□□□□ -1.99
SDS3YIL084C RCN1P36054 211 aa2.63□□□□□ -1.99
SDS3YIL084C YKR045CP36138 183 aa2.63□□□□□ -1.99
SDS3YIL084C UMP1P38293 148 aa2.63□□□□□ -1.99
SDS3YIL084C MPC2P38857 129 aa2.63□□□□□ -1.99
SDS3YIL084C COX15P40086 486 aa2.63□□□□□ -1.99
SDS3YIL084C TMA22P47089 198 aaPredicted RBP2.63□□□□□ -1.99
SDS3YIL084C OST3P48439 350 aa2.63□□□□□ -1.99
SDS3YIL084C SOL1P50278 321 aa2.63□□□□□ -1.99
SDS3YIL084C SLX9P53251 210 aaPredicted RBP2.63□□□□□ -1.99
SDS3YIL084C NEJ1Q06148 342 aa2.63□□□□□ -1.99
SDS3YIL084C NOC4Q06512 552 aaPredicted RBP2.63□□□□□ -1.99
SDS3YIL084C YPD1Q07688 167 aa2.63□□□□□ -1.99
SDS3YIL084C HIS3P06633 220 aa2.62□□□□□ -1.99
SDS3YIL084C HYM1P32464 399 aa2.62□□□□□ -1.99
SDS3YIL084C SNC2P33328 115 aa2.62□□□□□ -1.99
SDS3YIL084C YBR285WP38354 144 aa2.62□□□□□ -1.99
SDS3YIL084C GNA1P43577 159 aaPredicted RBP2.62□□□□□ -1.99
SDS3YIL084C YJR012CP47087 207 aa2.62□□□□□ -1.99
SDS3YIL084C YMR099CQ03161 297 aaKnown RBP2.62□□□□□ -1.99
SDS3YIL084C LPP1Q04396 274 aa2.62□□□□□ -1.99
SDS3YIL084C ATG17Q06410 417 aa2.62□□□□□ -1.99
SDS3YIL084C YGL041W-AP0C5N3 154 aa2.61□□□□□ -1.99
SDS3YIL084C PEX4P29340 183 aa2.61□□□□□ -1.99
SDS3YIL084C THO1P40040 218 aaKnown RBP2.61□□□□□ -1.99
SDS3YIL084C CCS1P40202 249 aaKnown RBP2.61□□□□□ -1.99
SDS3YIL084C ATC1Q04005 294 aa2.61□□□□□ -1.99
SDS3YIL084C PEX10Q05568 337 aa2.61□□□□□ -1.99
SDS3YIL084C YPR013CQ12145 317 aa2.61□□□□□ -1.99
SDS3YIL084C HTB1P02293 131 aaKnown RBP2.6□□□□□ -1.99
SDS3YIL084C YRB2P40517 327 aa2.6□□□□□ -1.99
SDS3YIL084C YJL118WP47022 219 aa2.6□□□□□ -1.99
SDS3YIL084C NIF3P53081 288 aa2.6□□□□□ -1.99
SDS3YIL084C SMT3Q12306 101 aaKnown RBP2.6□□□□□ -1.99
SDS3YIL084C YCR101CP25607 182 aa2.59□□□□□ -1.99
SDS3YIL084C OCH1P31755 480 aa2.59□□□□□ -1.99
SDS3YIL084C UTP30P36144 274 aaKnown RBP2.59□□□□□ -1.99
SDS3YIL084C SNU13P39990 126 aaKnown RBP2.59□□□□□ -1.99
SDS3YIL084C YFR035CP43608 114 aa2.59□□□□□ -1.99
SDS3YIL084C YAR1P46683 200 aa2.59□□□□□ -1.99
SDS3YIL084C YGL204CP53089 101 aa2.59□□□□□ -1.99
SDS3YIL084C PAU12P53343 120 aa2.59□□□□□ -1.99
SDS3YIL084C DGK1Q12382 290 aa2.59□□□□□ -1.99
SDS3YIL084C YLR099W-AQ3E798 87 aa2.59□□□□□ -1.99
SDS3YIL084C YBL112CQ3E7Y4 105 aa2.59□□□□□ -1.99
SDS3YIL084C RPL9AP05738 191 aaKnown RBP2.58□□□□□ -2
SDS3YIL084C MATALPHA1P0CY06 175 aa2.58□□□□□ -2
SDS3YIL084C HMLALPHA1P0CY07 175 aa2.58□□□□□ -2
SDS3YIL084C IDP1P21954 428 aaKnown RBP2.58□□□□□ -2
SDS3YIL084C ARO7P32178 256 aa2.58□□□□□ -2
SDS3YIL084C ERG24P32462 438 aaKnown RBP2.58□□□□□ -2
SDS3YIL084C PAU24P38155 120 aa2.58□□□□□ -2
SDS3YIL084C YPT31P38555 223 aaKnown RBP2.58□□□□□ -2
SDS3YIL084C IKI1P38874 309 aa2.58□□□□□ -2
SDS3YIL084C TEM1P38987 245 aa2.58□□□□□ -2
SDS3YIL084C AGX1P43567 385 aa2.58□□□□□ -2
SDS3YIL084C COX12Q01519 83 aa2.58□□□□□ -2
SDS3YIL084C FCF1Q05498 189 aaPredicted RBP2.58□□□□□ -2
SDS3YIL084C AGC1Q12482 902 aa2.58□□□□□ -2
SDS3YIL084C ROX3P25046 220 aa2.57□□□□□ -2
SDS3YIL084C RPB7P34087 171 aa2.57□□□□□ -2
SDS3YIL084C YUH1P35127 236 aa2.57□□□□□ -2
SDS3YIL084C GPI14P47088 403 aaKnown RBP2.57□□□□□ -2
SDS3YIL084C BXI1P48558 297 aa2.57□□□□□ -2
SDS3YIL084C ALG13P53178 202 aa2.57□□□□□ -2
SDS3YIL084C CTF19Q02732 369 aa2.57□□□□□ -2
SDS3YIL084C SPC24Q04477 213 aa2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms