RNA–Protein interactions for RNA: YHR031C

RRM3, Transcript of DNA helicase involved in rDNA replication and Ty1 transposition, yeast

Gene RRM3, Length 2,172 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRM3	YHR031C	FMP49	A0A023PZB3	126 aa		2.61	□□□□□ -1.99
RRM3	YHR031C	RPL28	P02406	149 aa	Known RBP	2.61	□□□□□ -1.99
RRM3	YHR031C	YIH1	P25637	258 aa		2.61	□□□□□ -1.99
RRM3	YHR031C	MKK1	P32490	508 aa		2.61	□□□□□ -1.99
RRM3	YHR031C	LYS1	P38998	373 aa	RIP-Chip data	2.61	□□□□□ -1.99	RIP-Chip
RRM3	YHR031C	YIR016W	P40572	265 aa		2.61	□□□□□ -1.99
RRM3	YHR031C	EMC4	P53073	190 aa		2.61	□□□□□ -1.99
RRM3	YHR031C	MRX11	Q03079	207 aa		2.61	□□□□□ -1.99
RRM3	YHR031C	YMR310C	Q04867	317 aa	Predicted RBP	2.61	□□□□□ -1.99
RRM3	YHR031C	YDL057W	Q07379	328 aa		2.61	□□□□□ -1.99
RRM3	YHR031C	PEX11	Q12462	236 aa		2.61	□□□□□ -1.99
RRM3	YHR031C	YPL229W	Q99395	206 aa		2.61	□□□□□ -1.99
RRM3	YHR031C	HEM4	P06174	275 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	YCR085W	P25650	117 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	YCR090C	P25654	182 aa	Known RBP	2.6	□□□□□ -1.99
RRM3	YHR031C	YMC2	P38087	329 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	SHE1	P38200	338 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	CYB5	P40312	120 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	CUP9	P41817	306 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	UBX6	P47049	396 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	YJL028W	P47062	111 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	TOS2	P50078	622 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	YMR103C	Q04436	120 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	SNT309	Q06091	175 aa	Predicted RBP	2.6	□□□□□ -1.99
RRM3	YHR031C	HRT1	Q08273	121 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	YOR385W	Q08909	290 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	YNL277W-A	Q3E7Z0	62 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	YLL053C	P0CD98	152 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	URA5	P13298	226 aa	Known RBP	2.6	□□□□□ -1.99
RRM3	YHR031C	SEC11	P15367	167 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	CNE1	P27825	502 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	IES6	P32617	166 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	YER134C	P40081	178 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	CCS1	P40202	249 aa	Known RBP	2.6	□□□□□ -1.99
RRM3	YHR031C	CAX4	P53223	239 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	TEX1	P53851	422 aa	Known RBP	2.6	□□□□□ -1.99
RRM3	YHR031C	ALG9	P53868	555 aa	Known RBP	2.6	□□□□□ -1.99
RRM3	YHR031C	IRC15	Q02733	499 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	POC4	Q12245	148 aa	Predicted RBP	2.6	□□□□□ -1.99
RRM3	YHR031C	ATO3	Q12359	275 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	YLR146W-A	Q2V2P1	62 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	ENV10	Q99382	181 aa		2.6	□□□□□ -1.99
RRM3	YHR031C	SLH1	P53327	1967 aa	Known RBP	2.59	□□□□□ -1.99
RRM3	YHR031C	CHO1	P08456	276 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	YRF1-3	P0CX14	1859 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	YRF1-7	P0CX15	1859 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	SPS18	P32572	300 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	RPB7	P34087	171 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	MID2	P36027	376 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	YJL193W	P39542	402 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	YEA4	P40004	342 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	VHS2	P40463	436 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	SFT1	P43682	97 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	RPS10B	P46784	105 aa	Known RBP	2.59	□□□□□ -1.99
RRM3	YHR031C	YRF1-6	P53819	1859 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	YLR152C	P54072	576 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	HSK3	P69852	69 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	INP1	Q03694	420 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	YDL218W	Q07629	317 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	RRT7	Q07829	113 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	ENB1	Q08299	606 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	YOR097C	Q12274	175 aa	Predicted RBP	2.59	□□□□□ -1.99
RRM3	YHR031C	UTP23	Q12339	254 aa	Known RBP	2.59	□□□□□ -1.99
RRM3	YHR031C	ZPS1	Q12512	249 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	YPL247C	Q12523	523 aa		2.59	□□□□□ -1.99
RRM3	YHR031C	ILV1	P00927	576 aa	Known RBP	2.59	□□□□□ -2
RRM3	YHR031C	RPL18A	P0CX49	186 aa	Known RBP	2.59	□□□□□ -2
RRM3	YHR031C	RPL18B	P0CX50	186 aa	Known RBP	2.59	□□□□□ -2
RRM3	YHR031C	RFA2	P26754	273 aa	Known RBP	2.59	□□□□□ -2
RRM3	YHR031C	RPA12	P32529	125 aa	Known RBP	2.59	□□□□□ -2
RRM3	YHR031C	FMP46	P36141	133 aa	Known RBP	2.59	□□□□□ -2
RRM3	YHR031C	ECM14	P38836	430 aa		2.59	□□□□□ -2
RRM3	YHR031C	PTH1	P38876	190 aa	Known RBP	2.59	□□□□□ -2
RRM3	YHR031C	ELO1	P39540	310 aa		2.59	□□□□□ -2
RRM3	YHR031C	EGT2	P42835	1041 aa		2.59	□□□□□ -2
RRM3	YHR031C	BAT2	P47176	376 aa	Known RBP	2.59	□□□□□ -2
RRM3	YHR031C	YGR164W	P53291	111 aa		2.59	□□□□□ -2
RRM3	YHR031C	YGR219W	P53307	113 aa		2.59	□□□□□ -2
RRM3	YHR031C	YPL039W	Q03080	316 aa		2.59	□□□□□ -2
RRM3	YHR031C	EMI1	Q04406	187 aa		2.59	□□□□□ -2
RRM3	YHR031C	YOR015W	Q12169	119 aa		2.59	□□□□□ -2
RRM3	YHR031C	YDL007C-A	Q2V2Q0	85 aa		2.59	□□□□□ -2
RRM3	YHR031C	YCR024C-B	Q3E7Z8	88 aa		2.59	□□□□□ -2
RRM3	YHR031C	FKS3	Q04952	1785 aa		2.58	□□□□□ -2
RRM3	YHR031C	COX5A	P00424	153 aa		2.58	□□□□□ -2
RRM3	YHR031C	NHP2	P32495	156 aa	Predicted RBP	2.58	□□□□□ -2
RRM3	YHR031C	YBR292C	P38357	123 aa		2.58	□□□□□ -2
RRM3	YHR031C	URM1	P40554	99 aa	Predicted RBP	2.58	□□□□□ -2
RRM3	YHR031C	MIC27	P50945	234 aa		2.58	□□□□□ -2
RRM3	YHR031C	SUN4	P53616	420 aa		2.58	□□□□□ -2
RRM3	YHR031C	IGO1	P53897	168 aa		2.58	□□□□□ -2
RRM3	YHR031C	BUD25	P85052	153 aa		2.58	□□□□□ -2
RRM3	YHR031C	NRG1	Q03125	231 aa		2.58	□□□□□ -2
RRM3	YHR031C	RAF1	Q06891	181 aa		2.58	□□□□□ -2
RRM3	YHR031C	DFM1	Q12743	341 aa	Known RBP	2.58	□□□□□ -2
RRM3	YHR031C	YOR338W	Q99326	363 aa		2.58	□□□□□ -2
RRM3	YHR031C	MYO1	P08964	1928 aa		2.57	□□□□□ -2
RRM3	YHR031C	RPL2A	P0CX45	254 aa	Known RBP	2.57	□□□□□ -2
RRM3	YHR031C	RPL2B	P0CX46	254 aa	Known RBP	2.57	□□□□□ -2
RRM3	YHR031C	PAU24	P38155	120 aa		2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 47.3 ms