RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C SFT2P38166 215 aa5.62□□□□□ -1.51
SOD2YHR008C YHR022CP38763 256 aa5.62□□□□□ -1.51
SOD2YHR008C ODC1Q03028 310 aa5.62□□□□□ -1.51
SOD2YHR008C DFM1Q12743 341 aaKnown RBP5.62□□□□□ -1.51
SOD2YHR008C YPR145C-AQ2V2P0 78 aa5.62□□□□□ -1.51
SOD2YHR008C YLL066W-BQ8TGJ7 56 aa5.62□□□□□ -1.51
SOD2YHR008C SEC22P22214 214 aa5.61□□□□□ -1.51
SOD2YHR008C YJR096WP47137 282 aa5.61□□□□□ -1.51
SOD2YHR008C YPS5P53057 165 aa5.61□□□□□ -1.51
SOD2YHR008C PBA1Q05778 276 aa5.61□□□□□ -1.51
SOD2YHR008C NGL1Q08213 363 aaKnown RBP5.61□□□□□ -1.51
SOD2YHR008C USV1Q12132 391 aa5.61□□□□□ -1.51
SOD2YHR008C YCR016WP25617 290 aaKnown RBP5.6□□□□□ -1.51
SOD2YHR008C TIR2P33890 251 aa5.6□□□□□ -1.51
SOD2YHR008C MRPL3P36516 390 aa5.6□□□□□ -1.51
SOD2YHR008C AIM45Q12480 344 aaKnown RBP5.6□□□□□ -1.51
SOD2YHR008C HTZ1Q12692 134 aaKnown RBP5.6□□□□□ -1.51
SOD2YHR008C YMR316C-AI2HB70 103 aa5.59□□□□□ -1.51
SOD2YHR008C DFR1P07807 211 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
SOD2YHR008C RPS25BP0C0T4 108 aaKnown RBP5.59□□□□□ -1.51
SOD2YHR008C DDI2P0CH63 225 aa5.59□□□□□ -1.51
SOD2YHR008C DDI3P0CH64 225 aa5.59□□□□□ -1.51
SOD2YHR008C EMP24P32803 203 aaKnown RBP5.59□□□□□ -1.51
SOD2YHR008C ATG27P46989 271 aa5.59□□□□□ -1.51
SOD2YHR008C YDL183CP48569 320 aa5.59□□□□□ -1.51
SOD2YHR008C PKP2P53170 491 aa5.59□□□□□ -1.51
SOD2YHR008C PDR17P53844 350 aa5.59□□□□□ -1.51
SOD2YHR008C MGR3Q04472 501 aa5.59□□□□□ -1.51
SOD2YHR008C RPS25AQ3E792 108 aaPredicted RBP5.59□□□□□ -1.51
SOD2YHR008C RTC6O14464 93 aa5.58□□□□□ -1.52
SOD2YHR008C SHB17P36136 271 aaKnown RBP5.58□□□□□ -1.52
SOD2YHR008C ASP1P38986 381 aaPredicted RBP5.58□□□□□ -1.52
SOD2YHR008C JLP2P40206 208 aa5.58□□□□□ -1.52
SOD2YHR008C NUP42P49686 430 aaKnown RBP5.58□□□□□ -1.52
SOD2YHR008C YIF1P53845 314 aaKnown RBP5.58□□□□□ -1.52
SOD2YHR008C POM34Q12445 299 aa5.58□□□□□ -1.52
SOD2YHR008C RPL13BP40212 199 aaKnown RBP5.57□□□□□ -1.52
SOD2YHR008C YJL028WP47062 111 aa5.57□□□□□ -1.52
SOD2YHR008C MIC27P50945 234 aa5.57□□□□□ -1.52
SOD2YHR008C ATP23P53722 227 aa5.57□□□□□ -1.52
SOD2YHR008C BOR1P53838 576 aa5.57□□□□□ -1.52
SOD2YHR008C YMR090WQ04304 227 aaKnown RBP5.57□□□□□ -1.52
SOD2YHR008C RPL13AQ12690 199 aaPredicted RBP5.57□□□□□ -1.52
SOD2YHR008C NPL6P32832 435 aa5.56□□□□□ -1.52
SOD2YHR008C LSM2P38203 95 aaKnown RBP5.56□□□□□ -1.52
SOD2YHR008C SAS2P40963 338 aa5.56□□□□□ -1.52
SOD2YHR008C YNR071CP53757 342 aa5.56□□□□□ -1.52
SOD2YHR008C TMA20P89886 181 aaPredicted RBP5.56□□□□□ -1.52
SOD2YHR008C TMA23Q03525 211 aa5.56□□□□□ -1.52
SOD2YHR008C PHO92Q06390 306 aa5.56□□□□□ -1.52
SOD2YHR008C COA2Q3E823 68 aa5.56□□□□□ -1.52
SOD2YHR008C CYC1P00044 109 aaPredicted RBP5.55□□□□□ -1.52
SOD2YHR008C RNA15P25299 296 aaPredicted RBP5.55□□□□□ -1.52
SOD2YHR008C SUA5P32579 426 aa5.55□□□□□ -1.52
SOD2YHR008C YMR253CQ04835 414 aa5.55□□□□□ -1.52
SOD2YHR008C MRP10O75012 95 aa5.54□□□□□ -1.52
SOD2YHR008C TPI1P00942 248 aaKnown RBP5.54□□□□□ -1.52
SOD2YHR008C VAR1P02381 398 aa5.54□□□□□ -1.52
SOD2YHR008C PET100P38958 111 aa5.54□□□□□ -1.52
SOD2YHR008C SWM2P40342 146 aa5.54□□□□□ -1.52
SOD2YHR008C YCH1P42937 148 aa5.54□□□□□ -1.52
SOD2YHR008C DSK2P48510 373 aa5.54□□□□□ -1.52
SOD2YHR008C TRM13Q12383 476 aa5.54□□□□□ -1.52
SOD2YHR008C YOL085CQ99345 113 aa5.54□□□□□ -1.52
SOD2YHR008C YLR302CO13544 120 aa5.53□□□□□ -1.52
SOD2YHR008C YDR034C-AP0C289 58 aa5.53□□□□□ -1.52
SOD2YHR008C PPQ1P32945 549 aa5.53□□□□□ -1.52
SOD2YHR008C SHH3Q04487 196 aa5.53□□□□□ -1.52
SOD2YHR008C RDI1Q12434 202 aa5.53□□□□□ -1.52
SOD2YHR008C NKP1Q12493 238 aa5.53□□□□□ -1.52
SOD2YHR008C COQ3P27680 312 aa5.52□□□□□ -1.53
SOD2YHR008C SLM6P38343 150 aa5.52□□□□□ -1.53
SOD2YHR008C MBB1P39534 108 aa5.52□□□□□ -1.53
SOD2YHR008C SER2P42941 309 aa5.52□□□□□ -1.53
SOD2YHR008C ARG80P07249 177 aa5.51□□□□□ -1.53
SOD2YHR008C PUT1P09368 476 aa5.51□□□□□ -1.53
SOD2YHR008C YPC1P38298 316 aa5.51□□□□□ -1.53
SOD2YHR008C IES5P40060 125 aa5.51□□□□□ -1.53
SOD2YHR008C SPI1P40092 148 aa5.51□□□□□ -1.53
SOD2YHR008C YGR269WP40326 108 aa5.51□□□□□ -1.53
SOD2YHR008C RPB3P16370 318 aaKnown RBP5.5□□□□□ -1.53
SOD2YHR008C CWC23P52868 283 aaPredicted RBP5.5□□□□□ -1.53
SOD2YHR008C LSM7P53905 115 aaKnown RBP5.5□□□□□ -1.53
SOD2YHR008C ERP1Q05359 219 aaKnown RBP5.5□□□□□ -1.53
SOD2YHR008C TFB5Q3E7C1 72 aaPredicted RBP5.5□□□□□ -1.53
SOD2YHR008C Q0255P03881 472 aa5.49□□□□□ -1.53
SOD2YHR008C AGA1P32323 725 aa5.49□□□□□ -1.53
SOD2YHR008C KRE9P39005 276 aa5.49□□□□□ -1.53
SOD2YHR008C PEX7P39108 375 aa5.49□□□□□ -1.53
SOD2YHR008C RRT13P40042 185 aa5.49□□□□□ -1.53
SOD2YHR008C TPN1P53099 579 aa5.49□□□□□ -1.53
SOD2YHR008C GPG1P53130 126 aa5.49□□□□□ -1.53
SOD2YHR008C GPI15P53961 229 aa5.49□□□□□ -1.53
SOD2YHR008C YHR213W-AQ8TGT4 77 aa5.49□□□□□ -1.53
SOD2YHR008C CPT1P17898 393 aa5.48□□□□□ -1.53
SOD2YHR008C YGR017WP53210 297 aa5.48□□□□□ -1.53
SOD2YHR008C YDR366CP87287 132 aa5.48□□□□□ -1.53
SOD2YHR008C YLR042CQ07990 161 aa5.48□□□□□ -1.53
SOD2YHR008C NHP6BP11633 99 aaKnown RBP5.47□□□□□ -1.53
SOD2YHR008C TIM44Q01852 431 aa5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms