RNA–Protein interactions for RNA: YHL030W

ECM29, Transcript of Scaffold protein, yeastyeast

Gene ECM29, Length 5,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM29YHL030W PAU23Q07987 124 aa2.39□□□□□ -2.03
ECM29YHL030W PAU17Q12370 124 aa2.39□□□□□ -2.03
ECM29YHL030W VAR1P02381 398 aa2.39□□□□□ -2.03
ECM29YHL030W RPS27AP35997 82 aaKnown RBP2.39□□□□□ -2.03
ECM29YHL030W RPS27BP38711 82 aa2.39□□□□□ -2.03
ECM29YHL030W YFR054CP43622 192 aa2.39□□□□□ -2.03
ECM29YHL030W ATP23P53722 227 aa2.39□□□□□ -2.03
ECM29YHL030W YPL264CQ08980 353 aa2.39□□□□□ -2.03
ECM29YHL030W TPT1Q12272 230 aaKnown RBP2.39□□□□□ -2.03
ECM29YHL030W CYT1P07143 309 aa2.38□□□□□ -2.03
ECM29YHL030W PAU16P35994 123 aa2.38□□□□□ -2.03
ECM29YHL030W SWD2P36104 329 aaPredicted RBP2.38□□□□□ -2.03
ECM29YHL030W PAM17P36147 197 aa2.38□□□□□ -2.03
ECM29YHL030W RPL32P38061 130 aaKnown RBP2.38□□□□□ -2.03
ECM29YHL030W YER134CP40081 178 aa2.38□□□□□ -2.03
ECM29YHL030W VHS2P40463 436 aa2.38□□□□□ -2.03
ECM29YHL030W MPP6P53725 186 aaPredicted RBP2.38□□□□□ -2.03
ECM29YHL030W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
ECM29YHL030W DYN2Q02647 92 aa2.38□□□□□ -2.03
ECM29YHL030W YGL258W-AQ3E740 77 aa2.38□□□□□ -2.03
ECM29YHL030W RPL23AP0CX41 137 aaKnown RBP2.38□□□□□ -2.03
ECM29YHL030W RPL23BP0CX42 137 aaKnown RBP2.38□□□□□ -2.03
ECM29YHL030W MRPL39P36533 70 aa2.38□□□□□ -2.03
ECM29YHL030W SWD3P38123 315 aa2.38□□□□□ -2.03
ECM29YHL030W YNL092WP53934 400 aa2.38□□□□□ -2.03
ECM29YHL030W YPL162CQ12042 273 aa2.38□□□□□ -2.03
ECM29YHL030W GEP5Q12393 293 aa2.38□□□□□ -2.03
ECM29YHL030W POR1P04840 283 aaKnown RBP2.38□□□□□ -2.03
ECM29YHL030W ERG2P32352 222 aa2.38□□□□□ -2.03
ECM29YHL030W EMP70P32802 667 aa2.38□□□□□ -2.03
ECM29YHL030W YBL059WP34224 193 aa2.38□□□□□ -2.03
ECM29YHL030W YKL107WP34251 309 aa2.38□□□□□ -2.03
ECM29YHL030W YBR220CP38318 560 aa2.38□□□□□ -2.03
ECM29YHL030W YHR173CP38864 112 aa2.38□□□□□ -2.03
ECM29YHL030W AGE2P40529 298 aa2.38□□□□□ -2.03
ECM29YHL030W AGE1Q04412 482 aa2.38□□□□□ -2.03
ECM29YHL030W HPA2Q06592 156 aa2.38□□□□□ -2.03
ECM29YHL030W SET6Q12529 373 aa2.38□□□□□ -2.03
ECM29YHL030W YPR108W-AQ3E7B3 70 aa2.38□□□□□ -2.03
ECM29YHL030W YCR023CP25351 611 aa2.38□□□□□ -2.03
ECM29YHL030W YBL071CP38185 102 aa2.38□□□□□ -2.03
ECM29YHL030W YER158CP40095 573 aa2.38□□□□□ -2.03
ECM29YHL030W BNS1P50084 137 aa2.38□□□□□ -2.03
ECM29YHL030W FHN1P53279 174 aa2.38□□□□□ -2.03
ECM29YHL030W YNR040WP53736 256 aa2.38□□□□□ -2.03
ECM29YHL030W HED1Q03937 162 aa2.38□□□□□ -2.03
ECM29YHL030W FSF1Q12029 327 aaKnown RBP2.38□□□□□ -2.03
ECM29YHL030W PRR2Q12310 699 aa2.38□□□□□ -2.03
ECM29YHL030W AGA2P32781 87 aa2.38□□□□□ -2.03
ECM29YHL030W RPB7P34087 171 aa2.38□□□□□ -2.03
ECM29YHL030W CCS1P40202 249 aaKnown RBP2.38□□□□□ -2.03
ECM29YHL030W YPL073CP40323 161 aa2.38□□□□□ -2.03
ECM29YHL030W YPS6P40583 537 aa2.38□□□□□ -2.03
ECM29YHL030W YJR096WP47137 282 aa2.38□□□□□ -2.03
ECM29YHL030W VPS63O13549 108 aa2.37□□□□□ -2.03
ECM29YHL030W XBP1P40489 647 aa2.37□□□□□ -2.03
ECM29YHL030W YGR039WP53225 103 aa2.37□□□□□ -2.03
ECM29YHL030W RPL15BP54780 204 aaPredicted RBP2.37□□□□□ -2.03
ECM29YHL030W YRA1Q12159 226 aaKnown RBP2.37□□□□□ -2.03
ECM29YHL030W WSC3Q12215 556 aa2.37□□□□□ -2.03
ECM29YHL030W REC104P33323 182 aa2.37□□□□□ -2.03
ECM29YHL030W FYV4P38783 130 aaPredicted RBP2.37□□□□□ -2.03
ECM29YHL030W GPP2P40106 250 aaKnown RBP2.37□□□□□ -2.03
ECM29YHL030W YHP1Q04116 353 aa2.37□□□□□ -2.03
ECM29YHL030W YFL068WP0CX99 160 aa2.37□□□□□ -2.03
ECM29YHL030W YLL066W-AP0CY00 160 aa2.37□□□□□ -2.03
ECM29YHL030W YLL067W-AP0CY01 160 aa2.37□□□□□ -2.03
ECM29YHL030W ATP10P18496 279 aa2.37□□□□□ -2.03
ECM29YHL030W RPS26AP39938 119 aaKnown RBP2.37□□□□□ -2.03
ECM29YHL030W RPS26BP39939 119 aaKnown RBP2.37□□□□□ -2.03
ECM29YHL030W EOS1P53938 366 aa2.37□□□□□ -2.03
ECM29YHL030W OCA2P53949 197 aa2.37□□□□□ -2.03
ECM29YHL030W HPF1Q05164 967 aa2.37□□□□□ -2.03
ECM29YHL030W YOR292CQ08743 309 aa2.37□□□□□ -2.03
ECM29YHL030W YPL261CQ08976 102 aa2.37□□□□□ -2.03
ECM29YHL030W MYO1P08964 1928 aa2.37□□□□□ -2.03
ECM29YHL030W YMR316C-AI2HB70 103 aa2.37□□□□□ -2.03
ECM29YHL030W YER190C-BP0CX94 160 aa2.37□□□□□ -2.03
ECM29YHL030W YEL077W-AP0CX95 160 aa2.37□□□□□ -2.03
ECM29YHL030W YGR296C-BP0CX96 160 aa2.37□□□□□ -2.03
ECM29YHL030W YPL283W-BP0CX97 160 aa2.37□□□□□ -2.03
ECM29YHL030W YPR204C-AP0CX98 160 aa2.37□□□□□ -2.03
ECM29YHL030W ECM33P38248 429 aaKnown RBP2.37□□□□□ -2.03
ECM29YHL030W SUN4P53616 420 aa2.37□□□□□ -2.03
ECM29YHL030W POP3P53833 195 aaPredicted RBP2.36□□□□□ -2.03
ECM29YHL030W STP3Q05937 343 aa2.36□□□□□ -2.03
ECM29YHL030W NCE102Q12207 173 aaRIP-Chip data2.36□□□□□ -2.03not detected
ECM29YHL030W YCR024C-BQ3E7Z8 88 aa2.36□□□□□ -2.03
ECM29YHL030W YKR070WP36151 352 aaKnown RBP2.36□□□□□ -2.03
ECM29YHL030W SFT2P38166 215 aa2.36□□□□□ -2.03
ECM29YHL030W YHR140WP38842 239 aa2.36□□□□□ -2.03
ECM29YHL030W POP2P39008 433 aa2.36□□□□□ -2.03
ECM29YHL030W SIP18P50263 79 aa2.36□□□□□ -2.03
ECM29YHL030W COX18P53239 316 aa2.36□□□□□ -2.03
ECM29YHL030W RPL34AP87262 121 aaPredicted RBP2.36□□□□□ -2.03
ECM29YHL030W YMR181CQ03231 154 aa2.36□□□□□ -2.03
ECM29YHL030W POC4Q12245 148 aaPredicted RBP2.36□□□□□ -2.03
ECM29YHL030W ADH2P00331 348 aaKnown RBP2.36□□□□□ -2.03
ECM29YHL030W YLR118CQ12354 227 aa2.36□□□□□ -2.03
ECM29YHL030W YCL021W-AQ96VH3 125 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 71.3 ms