RNA–Protein interactions for RNA: YGR178C

PBP1, Transcript of Component of glucose deprivation induced stress granules, yeastyeast

Gene PBP1, Length 2,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP1YGR178C YGL118CP53132 145 aa8.45□□□□□ -1.06
PBP1YGR178C GRE1Q08969 168 aa8.45□□□□□ -1.06
PBP1YGR178C BRR2P32639 2163 aaKnown RBP8.44□□□□□ -1.06
PBP1YGR178C COX1P00401 534 aa8.44□□□□□ -1.06
PBP1YGR178C NNK1P36003 928 aa8.44□□□□□ -1.06
PBP1YGR178C FYV4P38783 130 aaPredicted RBP8.44□□□□□ -1.06
PBP1YGR178C YJR015WP47090 510 aa8.44□□□□□ -1.06
PBP1YGR178C YJR115WP47152 169 aa8.44□□□□□ -1.06
PBP1YGR178C DIA1P54005 336 aa8.44□□□□□ -1.06
PBP1YGR178C RIM9Q04734 239 aa8.44□□□□□ -1.06
PBP1YGR178C YOR292CQ08743 309 aa8.44□□□□□ -1.06
PBP1YGR178C YDL180WQ12301 547 aa8.44□□□□□ -1.06
PBP1YGR178C PRP46Q12417 451 aaPredicted RBP8.44□□□□□ -1.06
PBP1YGR178C RAD23P32628 398 aaKnown RBP8.44□□□□□ -1.06
PBP1YGR178C SEC72P39742 193 aaKnown RBP8.44□□□□□ -1.06
PBP1YGR178C ARP3P47117 449 aaKnown RBP8.44□□□□□ -1.06
PBP1YGR178C SCW10Q04951 389 aa8.44□□□□□ -1.06
PBP1YGR178C RDL2Q08742 149 aaKnown RBP8.44□□□□□ -1.06
PBP1YGR178C ADH1P00330 348 aaKnown RBP8.43□□□□□ -1.06
PBP1YGR178C SAG1P20840 650 aa8.43□□□□□ -1.06
PBP1YGR178C PRM5P40476 318 aa8.43□□□□□ -1.06
PBP1YGR178C SDS23P53172 527 aa8.43□□□□□ -1.06
PBP1YGR178C RPL7BQ12213 244 aaKnown RBP8.43□□□□□ -1.06
PBP1YGR178C SEC16P48415 2195 aaKnown RBP8.43□□□□□ -1.06
PBP1YGR178C HMRA1P0CY11 126 aa8.42□□□□□ -1.06
PBP1YGR178C UBS1P38290 277 aa8.42□□□□□ -1.06
PBP1YGR178C SAS2P40963 338 aa8.42□□□□□ -1.06
PBP1YGR178C YNR064CP53750 290 aa8.42□□□□□ -1.06
PBP1YGR178C YNL184CP53876 108 aa8.42□□□□□ -1.06
PBP1YGR178C TDA7P53882 636 aaPredicted RBP8.42□□□□□ -1.06
PBP1YGR178C ECM18Q04623 453 aa8.42□□□□□ -1.06
PBP1YGR178C MCH2P36032 473 aa8.42□□□□□ -1.06
PBP1YGR178C ECM33P38248 429 aaKnown RBP8.42□□□□□ -1.06
PBP1YGR178C SHO1P40073 367 aa8.42□□□□□ -1.06
PBP1YGR178C CCS1P40202 249 aaKnown RBP8.42□□□□□ -1.06
PBP1YGR178C YPS6P40583 537 aa8.42□□□□□ -1.06
PBP1YGR178C SWT21P53873 357 aaPredicted RBP8.42□□□□□ -1.06
PBP1YGR178C YAR1P46683 200 aa8.41□□□□□ -1.06
PBP1YGR178C WIP1Q2V2P8 89 aa8.41□□□□□ -1.06
PBP1YGR178C YMR316C-AI2HB70 103 aa8.41□□□□□ -1.06
PBP1YGR178C TIR1P10863 254 aa8.41□□□□□ -1.06
PBP1YGR178C DAL82P21705 255 aa8.41□□□□□ -1.06
PBP1YGR178C HYP2P23301 157 aaKnown RBP8.41□□□□□ -1.06
PBP1YGR178C POP3P53833 195 aaPredicted RBP8.41□□□□□ -1.06
PBP1YGR178C DYN2Q02647 92 aa8.41□□□□□ -1.06
PBP1YGR178C NUD1P32336 851 aa8.4□□□□□ -1.06
PBP1YGR178C YER079WP40052 210 aaKnown RBP8.4□□□□□ -1.06
PBP1YGR178C COX18P53239 316 aa8.4□□□□□ -1.06
PBP1YGR178C BOR1P53838 576 aa8.4□□□□□ -1.06
PBP1YGR178C UTP23Q12339 254 aaKnown RBP8.4□□□□□ -1.06
PBP1YGR178C CDC43P18898 376 aa8.39□□□□□ -1.07
PBP1YGR178C RML2P32611 393 aa8.39□□□□□ -1.07
PBP1YGR178C SNU13P39990 126 aaKnown RBP8.39□□□□□ -1.07
PBP1YGR178C OYE3P41816 400 aaPredicted RBP8.39□□□□□ -1.07
PBP1YGR178C ATG4P53867 494 aa8.39□□□□□ -1.07
PBP1YGR178C VPS71Q03433 280 aa8.39□□□□□ -1.07
PBP1YGR178C DPP1Q05521 289 aa8.39□□□□□ -1.07
PBP1YGR178C USB1Q12208 290 aaKnown RBP8.39□□□□□ -1.07
PBP1YGR178C MRS3P10566 314 aa8.39□□□□□ -1.07
PBP1YGR178C SRX1P36077 127 aa8.39□□□□□ -1.07
PBP1YGR178C NTC20P38302 140 aaPredicted RBP8.39□□□□□ -1.07
PBP1YGR178C HUA1P40325 198 aa8.39□□□□□ -1.07
PBP1YGR178C NUP42P49686 430 aaKnown RBP8.39□□□□□ -1.07
PBP1YGR178C MIC27P50945 234 aa8.39□□□□□ -1.07
PBP1YGR178C BRP1P53194 125 aa8.39□□□□□ -1.07
PBP1YGR178C YML079WQ03629 201 aa8.39□□□□□ -1.07
PBP1YGR178C YDL129WQ07555 291 aa8.39□□□□□ -1.07
PBP1YGR178C ACC1Q00955 2233 aaKnown RBP8.39□□□□□ -1.07
PBP1YGR178C MRS1P07266 363 aa8.38□□□□□ -1.07
PBP1YGR178C YFL068WP0CX99 160 aa8.38□□□□□ -1.07
PBP1YGR178C YLL066W-AP0CY00 160 aa8.38□□□□□ -1.07
PBP1YGR178C YLL067W-AP0CY01 160 aa8.38□□□□□ -1.07
PBP1YGR178C YIL102C-AQ2V2P5 75 aa8.38□□□□□ -1.07
PBP1YGR178C YOS1Q3E834 85 aa8.38□□□□□ -1.07
PBP1YGR178C RPL23AP0CX41 137 aaKnown RBP8.38□□□□□ -1.07
PBP1YGR178C RPL23BP0CX42 137 aaKnown RBP8.38□□□□□ -1.07
PBP1YGR178C DAL80P26343 269 aa8.38□□□□□ -1.07
PBP1YGR178C SOR1P35497 357 aaKnown RBP8.38□□□□□ -1.07
PBP1YGR178C YFL054CP43549 646 aa8.38□□□□□ -1.07
PBP1YGR178C SOR2Q07786 357 aa8.38□□□□□ -1.07
PBP1YGR178C MPD1Q12404 318 aaKnown RBP8.38□□□□□ -1.07
PBP1YGR178C CRZ1P53968 678 aa8.37□□□□□ -1.07
PBP1YGR178C YDR391CQ04170 232 aa8.37□□□□□ -1.07
PBP1YGR178C THI72Q08579 599 aa8.37□□□□□ -1.07
PBP1YGR178C NIP7Q08962 181 aaKnown RBP8.37□□□□□ -1.07
PBP1YGR178C NCE102Q12207 173 aaRIP-Chip data8.37□□□□□ -1.07not detected
PBP1YGR178C MOB1P40484 314 aa8.37□□□□□ -1.07
PBP1YGR178C BET5Q03630 159 aa8.37□□□□□ -1.07
PBP1YGR178C API2Q04413 109 aa8.37□□□□□ -1.07
PBP1YGR178C POL2P21951 2222 aaKnown RBP8.36□□□□□ -1.07
PBP1YGR178C YAR068WP39564 161 aa8.36□□□□□ -1.07
PBP1YGR178C YJL163CP46996 555 aa8.36□□□□□ -1.07
PBP1YGR178C TRS23Q03784 219 aa8.36□□□□□ -1.07
PBP1YGR178C BEM2P39960 2167 aaKnown RBP8.35□□□□□ -1.07
PBP1YGR178C IMP1P28627 190 aa8.35□□□□□ -1.07
PBP1YGR178C YKL069WP36088 180 aa8.35□□□□□ -1.07
PBP1YGR178C YHR138CP38841 114 aaPredicted RBP8.35□□□□□ -1.07
PBP1YGR178C YIL012WP40551 113 aa8.35□□□□□ -1.07
PBP1YGR178C YHP1Q04116 353 aa8.35□□□□□ -1.07
PBP1YGR178C YMR254CQ04838 102 aa8.35□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 89 ms