RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W HSK3P69852 69 aa5.06□□□□□ -1.6
SKN1YGR143W COF1Q03048 143 aaKnown RBP5.06□□□□□ -1.6
SKN1YGR143W RPC11Q04307 110 aaPredicted RBP5.06□□□□□ -1.6
SKN1YGR143W YPL247CQ12523 523 aa5.06□□□□□ -1.6
SKN1YGR143W Q0182Q9ZZW1 134 aa5.06□□□□□ -1.6
SKN1YGR143W CNE1P27825 502 aa5.06□□□□□ -1.6
SKN1YGR143W PRO1P32264 428 aa5.06□□□□□ -1.6
SKN1YGR143W ERG24P32462 438 aaKnown RBP5.06□□□□□ -1.6
SKN1YGR143W YKR070WP36151 352 aaKnown RBP5.06□□□□□ -1.6
SKN1YGR143W NAT3Q06504 195 aa5.06□□□□□ -1.6
SKN1YGR143W FIT3Q08907 204 aa5.06□□□□□ -1.6
SKN1YGR143W ATG40Q99325 256 aa5.06□□□□□ -1.6
SKN1YGR143W TEL1P38110 2787 aa5.05□□□□□ -1.6
SKN1YGR143W MRS1P07266 363 aa5.05□□□□□ -1.6
SKN1YGR143W PRE2P30656 287 aaKnown RBP5.05□□□□□ -1.6
SKN1YGR143W ARP3P47117 449 aaKnown RBP5.05□□□□□ -1.6
SKN1YGR143W MTR3P48240 250 aaPredicted RBP5.05□□□□□ -1.6
SKN1YGR143W PGA1P53896 198 aa5.05□□□□□ -1.6
SKN1YGR143W UPS1Q05776 175 aa5.05□□□□□ -1.6
SKN1YGR143W TOR1P35169 2470 aa5.05□□□□□ -1.6
SKN1YGR143W ACC1Q00955 2233 aaKnown RBP5.05□□□□□ -1.6
SKN1YGR143W SEC11P15367 167 aa5.05□□□□□ -1.6
SKN1YGR143W YPS1P32329 569 aa5.05□□□□□ -1.6
SKN1YGR143W SPS18P32572 300 aa5.05□□□□□ -1.6
SKN1YGR143W YLR152CP54072 576 aa5.05□□□□□ -1.6
SKN1YGR143W EMI1Q04406 187 aa5.05□□□□□ -1.6
SKN1YGR143W YOR015WQ12169 119 aa5.05□□□□□ -1.6
SKN1YGR143W ECM12O13529 151 aa5.04□□□□□ -1.6
SKN1YGR143W URA5P13298 226 aaKnown RBP5.04□□□□□ -1.6
SKN1YGR143W RPB11P38902 120 aa5.04□□□□□ -1.6
SKN1YGR143W YMR310CQ04867 317 aaPredicted RBP5.04□□□□□ -1.6
SKN1YGR143W YDL218WQ07629 317 aa5.04□□□□□ -1.6
SKN1YGR143W ATO3Q12359 275 aa5.04□□□□□ -1.6
SKN1YGR143W SEN1Q00416 2231 aaKnown RBP5.04□□□□□ -1.6
SKN1YGR143W RPS13P05756 151 aaKnown RBP5.03□□□□□ -1.6
SKN1YGR143W RPB8P20436 146 aa5.03□□□□□ -1.6
SKN1YGR143W RIM1P32445 135 aaKnown RBP5.03□□□□□ -1.6
SKN1YGR143W MRPS5P33759 307 aa5.03□□□□□ -1.6
SKN1YGR143W SHE1P38200 338 aa5.03□□□□□ -1.6
SKN1YGR143W PTH1P38876 190 aaKnown RBP5.03□□□□□ -1.6
SKN1YGR143W KNH1P50112 268 aa5.03□□□□□ -1.6
SKN1YGR143W YGR219WP53307 113 aa5.03□□□□□ -1.6
SKN1YGR143W YPR098CQ06089 161 aa5.03□□□□□ -1.6
SKN1YGR143W SNT309Q06091 175 aaPredicted RBP5.03□□□□□ -1.6
SKN1YGR143W KTI11Q3E840 82 aa5.03□□□□□ -1.6
SKN1YGR143W STT4P37297 1900 aa5.03□□□□□ -1.6
SKN1YGR143W FMP49A0A023PZB3 126 aa5.03□□□□□ -1.6
SKN1YGR143W SRX1P36077 127 aa5.03□□□□□ -1.6
SKN1YGR143W LYS1P38998 373 aaRIP-Chip data5.03□□□□□ -1.6 RIP-Chip
SKN1YGR143W CYB5P40312 120 aa5.03□□□□□ -1.6
SKN1YGR143W MID1P41821 548 aa5.03□□□□□ -1.6
SKN1YGR143W TES1P41903 349 aaKnown RBP5.03□□□□□ -1.6
SKN1YGR143W SFT1P43682 97 aa5.03□□□□□ -1.6
SKN1YGR143W YMR103CQ04436 120 aa5.03□□□□□ -1.6
SKN1YGR143W YLR146W-AQ2V2P1 62 aa5.03□□□□□ -1.6
SKN1YGR143W NAG1Q8TGN9 163 aa5.03□□□□□ -1.6
SKN1YGR143W SOD2P00447 233 aa5.02□□□□□ -1.61
SKN1YGR143W TFS1P14306 219 aa5.02□□□□□ -1.61
SKN1YGR143W RPL14AP36105 138 aaKnown RBP5.02□□□□□ -1.61
SKN1YGR143W IST3P40565 148 aaPredicted RBP5.02□□□□□ -1.61
SKN1YGR143W GEP7P53171 287 aa5.02□□□□□ -1.61
SKN1YGR143W SDC1Q03323 175 aa5.02□□□□□ -1.61
SKN1YGR143W YLR149CQ99296 730 aa5.02□□□□□ -1.61
SKN1YGR143W TAD3Q9URQ3 322 aa5.02□□□□□ -1.61
SKN1YGR143W YCR090CP25654 182 aaKnown RBP5.02□□□□□ -1.61
SKN1YGR143W EGT2P42835 1041 aa5.02□□□□□ -1.61
SKN1YGR143W YOR338WQ99326 363 aa5.02□□□□□ -1.61
SKN1YGR143W CHO1P08456 276 aa5.01□□□□□ -1.61
SKN1YGR143W RPS21AP0C0V8 87 aaKnown RBP5.01□□□□□ -1.61
SKN1YGR143W YCR085WP25650 117 aa5.01□□□□□ -1.61
SKN1YGR143W VRP1P37370 817 aa5.01□□□□□ -1.61
SKN1YGR143W YJL193WP39542 402 aa5.01□□□□□ -1.61
SKN1YGR143W YER079WP40052 210 aaKnown RBP5.01□□□□□ -1.61
SKN1YGR143W SUN4P53616 420 aa5.01□□□□□ -1.61
SKN1YGR143W YMR090WQ04304 227 aaKnown RBP5.01□□□□□ -1.61
SKN1YGR143W ENV10Q99382 181 aa5.01□□□□□ -1.61
SKN1YGR143W KRE1P17260 313 aa5.01□□□□□ -1.61
SKN1YGR143W VMA3P25515 160 aa5.01□□□□□ -1.61
SKN1YGR143W ECM14P38836 430 aa5.01□□□□□ -1.61
SKN1YGR143W FLO5P38894 1075 aa5.01□□□□□ -1.61
SKN1YGR143W BAT2P47176 376 aaKnown RBP5.01□□□□□ -1.61
SKN1YGR143W BRR6P53062 197 aa5.01□□□□□ -1.61
SKN1YGR143W YPL039WQ03080 316 aa5.01□□□□□ -1.61
SKN1YGR143W YMR252CQ04814 134 aa5.01□□□□□ -1.61
SKN1YGR143W TOM40P23644 387 aaKnown RBP5□□□□□ -1.61
SKN1YGR143W IES6P32617 166 aa5□□□□□ -1.61
SKN1YGR143W TIM17P39515 158 aa5□□□□□ -1.61
SKN1YGR143W ALG9P53868 555 aaKnown RBP5□□□□□ -1.61
SKN1YGR143W MRX11Q03079 207 aa5□□□□□ -1.61
SKN1YGR143W ASM4Q05166 528 aa5□□□□□ -1.61
SKN1YGR143W ARC18Q05933 178 aaKnown RBP5□□□□□ -1.61
SKN1YGR143W STP4Q07351 490 aa5□□□□□ -1.61
SKN1YGR143W YPL264CQ08980 353 aa5□□□□□ -1.61
SKN1YGR143W YCR024C-BQ3E7Z8 88 aa5□□□□□ -1.61
SKN1YGR143W CSF1Q12150 2958 aa5□□□□□ -1.61
SKN1YGR143W TRX3P25372 127 aa5□□□□□ -1.61
SKN1YGR143W MID2P36027 376 aa5□□□□□ -1.61
SKN1YGR143W UTH1P36135 365 aa5□□□□□ -1.61
SKN1YGR143W FMP46P36141 133 aaKnown RBP5□□□□□ -1.61
SKN1YGR143W MST28P39552 234 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms