RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C PAL1Q05518 499 aaKnown RBP2.64□□□□□ -1.99
XRN1YGL173C CDD1Q06549 142 aa2.64□□□□□ -1.99
XRN1YGL173C YDL211CQ12121 372 aa2.64□□□□□ -1.99
XRN1YGL173C RTR2Q12378 196 aa2.64□□□□□ -1.99
XRN1YGL173C PEX11Q12462 236 aa2.64□□□□□ -1.99
XRN1YGL173C YBL010CP32788 280 aa2.64□□□□□ -1.99
XRN1YGL173C NSA2P40078 261 aaKnown RBP2.64□□□□□ -1.99
XRN1YGL173C GON7P46984 123 aa2.64□□□□□ -1.99
XRN1YGL173C CGI121Q03705 181 aaKnown RBP2.64□□□□□ -1.99
XRN1YGL173C RPB11P38902 120 aa2.64□□□□□ -1.99
XRN1YGL173C YNL033WP53964 284 aa2.64□□□□□ -1.99
XRN1YGL173C YNL019CP53975 284 aa2.64□□□□□ -1.99
XRN1YGL173C ELC1Q03071 99 aa2.64□□□□□ -1.99
XRN1YGL173C YHR139C-AO13536 103 aa2.63□□□□□ -1.99
XRN1YGL173C HIS3P06633 220 aa2.63□□□□□ -1.99
XRN1YGL173C GPA2P10823 449 aa2.63□□□□□ -1.99
XRN1YGL173C SCM4P32564 187 aa2.63□□□□□ -1.99
XRN1YGL173C ARC15P40518 154 aaRIP-Chip data2.63□□□□□ -1.99not detected
XRN1YGL173C FMP48P53233 369 aa2.63□□□□□ -1.99
XRN1YGL173C NDD1Q08887 554 aa2.63□□□□□ -1.99
XRN1YGL173C YLR099W-AQ3E798 87 aa2.63□□□□□ -1.99
XRN1YGL173C IGO2Q9P305 131 aa2.63□□□□□ -1.99
XRN1YGL173C PHO2P07269 559 aa2.63□□□□□ -1.99
XRN1YGL173C RPL14AP36105 138 aaKnown RBP2.63□□□□□ -1.99
XRN1YGL173C SCO2P38072 301 aa2.63□□□□□ -1.99
XRN1YGL173C RPL14BP38754 138 aaKnown RBP2.63□□□□□ -1.99
XRN1YGL173C YJL028WP47062 111 aa2.63□□□□□ -1.99
XRN1YGL173C YOR381W-AQ3E804 55 aa2.63□□□□□ -1.99
XRN1YGL173C YAR023CD6VPM8 179 aa2.63□□□□□ -1.99
XRN1YGL173C ATP5P09457 212 aa2.63□□□□□ -1.99
XRN1YGL173C HSP12P22943 109 aaKnown RBP2.63□□□□□ -1.99
XRN1YGL173C RPE1P46969 238 aa2.63□□□□□ -1.99
XRN1YGL173C MSA1Q08471 629 aa2.63□□□□□ -1.99
XRN1YGL173C RPL42AP0CX27 106 aaKnown RBP2.63□□□□□ -1.99
XRN1YGL173C RPL42BP0CX28 106 aaKnown RBP2.63□□□□□ -1.99
XRN1YGL173C ATG22P25568 528 aa2.63□□□□□ -1.99
XRN1YGL173C ECM34P38728 170 aa2.63□□□□□ -1.99
XRN1YGL173C AIM2P39721 246 aa2.63□□□□□ -1.99
XRN1YGL173C YFL067WP43537 175 aa2.63□□□□□ -1.99
XRN1YGL173C GEP7P53171 287 aa2.63□□□□□ -1.99
XRN1YGL173C ATG39Q06159 398 aa2.63□□□□□ -1.99
XRN1YGL173C YOL019WQ08157 551 aa2.63□□□□□ -1.99
XRN1YGL173C STT4P37297 1900 aa2.62□□□□□ -1.99
XRN1YGL173C YEL009C-AA0A023PZF2 135 aa2.62□□□□□ -1.99
XRN1YGL173C MSW1P04803 379 aa2.62□□□□□ -1.99
XRN1YGL173C RPL26AP05743 127 aaKnown RBP2.62□□□□□ -1.99
XRN1YGL173C DSF1P0CX08 502 aa2.62□□□□□ -1.99
XRN1YGL173C YNR073CP0CX09 502 aa2.62□□□□□ -1.99
XRN1YGL173C SMP1P38128 452 aa2.62□□□□□ -1.99
XRN1YGL173C YGL235WP53071 178 aa2.62□□□□□ -1.99
XRN1YGL173C RPL26BP53221 127 aaKnown RBP2.62□□□□□ -1.99
XRN1YGL173C MRPS8Q03799 155 aa2.62□□□□□ -1.99
XRN1YGL173C YPR202WQ08993 238 aa2.62□□□□□ -1.99
XRN1YGL173C ATP15P21306 62 aa2.62□□□□□ -1.99
XRN1YGL173C RPB9P27999 122 aa2.62□□□□□ -1.99
XRN1YGL173C IMP1P28627 190 aa2.62□□□□□ -1.99
XRN1YGL173C YPT31P38555 223 aaKnown RBP2.62□□□□□ -1.99
XRN1YGL173C TIM17P39515 158 aa2.62□□□□□ -1.99
XRN1YGL173C VPS71Q03433 280 aa2.62□□□□□ -1.99
XRN1YGL173C YOR268CQ08734 132 aa2.62□□□□□ -1.99
XRN1YGL173C COX4P04037 155 aa2.62□□□□□ -1.99
XRN1YGL173C RPS28BP0C0X0 67 aaKnown RBP2.62□□□□□ -1.99
XRN1YGL173C HSP26P15992 214 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
XRN1YGL173C CTR2P38865 189 aa2.62□□□□□ -1.99
XRN1YGL173C HPM1P40481 377 aa2.62□□□□□ -1.99
XRN1YGL173C ORM1P53224 222 aa2.62□□□□□ -1.99
XRN1YGL173C DAD4P69851 72 aa2.62□□□□□ -1.99
XRN1YGL173C RPS28AQ3E7X9 67 aaPredicted RBP2.62□□□□□ -1.99
XRN1YGL173C DDR48P18899 430 aaKnown RBP2.61□□□□□ -1.99
XRN1YGL173C FPR1P20081 114 aaKnown RBP2.61□□□□□ -1.99
XRN1YGL173C XBP1P40489 647 aa2.61□□□□□ -1.99
XRN1YGL173C EMI1Q04406 187 aa2.61□□□□□ -1.99
XRN1YGL173C GRE1Q08969 168 aa2.61□□□□□ -1.99
XRN1YGL173C YCL001W-BQ96VH2 84 aa2.61□□□□□ -1.99
XRN1YGL173C SCO1P23833 295 aa2.61□□□□□ -1.99
XRN1YGL173C TIM13P53299 105 aa2.61□□□□□ -1.99
XRN1YGL173C YNR062CP53748 327 aa2.61□□□□□ -1.99
XRN1YGL173C YDR415CQ04033 374 aaPredicted RBP2.61□□□□□ -1.99
XRN1YGL173C YPR114WQ06107 315 aa2.61□□□□□ -1.99
XRN1YGL173C SPC3Q12133 184 aa2.61□□□□□ -1.99
XRN1YGL173C FMP27Q06179 2628 aa2.61□□□□□ -1.99
XRN1YGL173C YCR025CP25352 136 aa2.61□□□□□ -1.99
XRN1YGL173C IGD1P43598 195 aa2.61□□□□□ -1.99
XRN1YGL173C DSK2P48510 373 aa2.61□□□□□ -1.99
XRN1YGL173C SWT21P53873 357 aaPredicted RBP2.61□□□□□ -1.99
XRN1YGL173C FMP49A0A023PZB3 126 aa2.6□□□□□ -1.99
XRN1YGL173C ZRT3P34240 503 aa2.6□□□□□ -1.99
XRN1YGL173C STB1P42845 420 aa2.6□□□□□ -1.99
XRN1YGL173C LSM8P47093 109 aaKnown RBP2.6□□□□□ -1.99
XRN1YGL173C THG1P53215 237 aaKnown RBP2.6□□□□□ -1.99
XRN1YGL173C RPL30P14120 105 aaKnown RBP2.6□□□□□ -1.99
XRN1YGL173C MRPL17P36528 281 aa2.6□□□□□ -1.99
XRN1YGL173C SMD3P43321 101 aaKnown RBP2.6□□□□□ -1.99
XRN1YGL173C YFL019CP43576 117 aa2.6□□□□□ -1.99
XRN1YGL173C CCH1P50077 2039 aa2.6□□□□□ -1.99
XRN1YGL173C PRP8P33334 2413 aaKnown RBP2.6□□□□□ -1.99
XRN1YGL173C PRE7P23724 241 aaKnown RBP2.6□□□□□ -1.99
XRN1YGL173C SRP21P32342 167 aa2.6□□□□□ -1.99
XRN1YGL173C MIG3P39943 394 aa2.6□□□□□ -1.99
XRN1YGL173C ATS1P31386 333 aa2.59□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms