RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W YRF1-6P53819 1859 aa2.81□□□□□ -1.96
USE1YGL098W ECM29P38737 1868 aa2.8□□□□□ -1.96
USE1YGL098W SOD1P00445 154 aaKnown RBP2.8□□□□□ -1.96
USE1YGL098W HMRA1P0CY11 126 aa2.8□□□□□ -1.96
USE1YGL098W CPT1P17898 393 aa2.8□□□□□ -1.96
USE1YGL098W CDC43P18898 376 aa2.8□□□□□ -1.96
USE1YGL098W ERG8P24521 451 aa2.8□□□□□ -1.96
USE1YGL098W ERG4P25340 473 aa2.8□□□□□ -1.96
USE1YGL098W PRE2P30656 287 aaKnown RBP2.8□□□□□ -1.96
USE1YGL098W PRS4P38063 326 aaPredicted RBP2.8□□□□□ -1.96
USE1YGL098W TRM7P38238 310 aaKnown RBP2.8□□□□□ -1.96
USE1YGL098W UBS1P38290 277 aa2.8□□□□□ -1.96
USE1YGL098W MIC12P38341 106 aa2.8□□□□□ -1.96
USE1YGL098W YER076CP40049 302 aa2.8□□□□□ -1.96
USE1YGL098W YIR016WP40572 265 aa2.8□□□□□ -1.96
USE1YGL098W YFR045WP43617 309 aa2.8□□□□□ -1.96
USE1YGL098W MRPL19P53875 158 aa2.8□□□□□ -1.96
USE1YGL098W CRZ1P53968 678 aa2.8□□□□□ -1.96
USE1YGL098W YPL039WQ03080 316 aa2.8□□□□□ -1.96
USE1YGL098W YMR178WQ03219 274 aaKnown RBP2.8□□□□□ -1.96
USE1YGL098W VPS71Q03433 280 aa2.8□□□□□ -1.96
USE1YGL098W AIM34Q03673 198 aa2.8□□□□□ -1.96
USE1YGL098W RAV2Q03956 351 aa2.8□□□□□ -1.96
USE1YGL098W LPP1Q04396 274 aa2.8□□□□□ -1.96
USE1YGL098W MRPL51Q06090 140 aaPredicted RBP2.8□□□□□ -1.96
USE1YGL098W YLR012CQ07927 99 aa2.8□□□□□ -1.96
USE1YGL098W GEP3Q08622 556 aa2.8□□□□□ -1.96
USE1YGL098W DGA1Q08650 418 aa2.8□□□□□ -1.96
USE1YGL098W YOR376WQ08900 122 aa2.8□□□□□ -1.96
USE1YGL098W YRA1Q12159 226 aaKnown RBP2.8□□□□□ -1.96
USE1YGL098W UTP23Q12339 254 aaKnown RBP2.8□□□□□ -1.96
USE1YGL098W COA2Q3E823 68 aa2.8□□□□□ -1.96
USE1YGL098W MSB2P32334 1306 aa2.79□□□□□ -1.96
USE1YGL098W RPS21AP0C0V8 87 aaKnown RBP2.79□□□□□ -1.96
USE1YGL098W KRE1P17260 313 aa2.79□□□□□ -1.96
USE1YGL098W YCR025CP25352 136 aa2.79□□□□□ -1.96
USE1YGL098W ERV1P27882 189 aa2.79□□□□□ -1.96
USE1YGL098W MTC7P32633 139 aa2.79□□□□□ -1.96
USE1YGL098W YKL044WP36092 106 aa2.79□□□□□ -1.96
USE1YGL098W PAM17P36147 197 aa2.79□□□□□ -1.96
USE1YGL098W YAR068WP39564 161 aa2.79□□□□□ -1.96
USE1YGL098W CCS1P40202 249 aaKnown RBP2.79□□□□□ -1.96
USE1YGL098W DFG10P40526 253 aa2.79□□□□□ -1.96
USE1YGL098W APQ12P40532 138 aa2.79□□□□□ -1.96
USE1YGL098W TDA4P47153 279 aa2.79□□□□□ -1.96
USE1YGL098W YGR039WP53225 103 aa2.79□□□□□ -1.96
USE1YGL098W YNR048WP53740 393 aa2.79□□□□□ -1.96
USE1YGL098W CSL4P53859 292 aaPredicted RBP2.79□□□□□ -1.96
USE1YGL098W ABF2Q02486 183 aa2.79□□□□□ -1.96
USE1YGL098W ARC18Q05933 178 aaKnown RBP2.79□□□□□ -1.96
USE1YGL098W HPA2Q06592 156 aa2.79□□□□□ -1.96
USE1YGL098W YFH1Q07540 174 aa2.79□□□□□ -1.96
USE1YGL098W GRE1Q08969 168 aa2.79□□□□□ -1.96
USE1YGL098W YPQ1Q12010 308 aa2.79□□□□□ -1.96
USE1YGL098W YDL211CQ12121 372 aa2.79□□□□□ -1.96
USE1YGL098W YDL180WQ12301 547 aa2.79□□□□□ -1.96
USE1YGL098W JID1Q12350 301 aa2.79□□□□□ -1.96
USE1YGL098W RPS21BQ3E754 87 aaKnown RBP2.79□□□□□ -1.96
USE1YGL098W ECM12O13529 151 aa2.78□□□□□ -1.96
USE1YGL098W YLR415CO13578 112 aa2.78□□□□□ -1.96
USE1YGL098W YER039C-AP0CD97 72 aa2.78□□□□□ -1.96
USE1YGL098W CTA1P15202 515 aa2.78□□□□□ -1.96
USE1YGL098W DSS4P32601 143 aa2.78□□□□□ -1.96
USE1YGL098W VMA11P32842 164 aa2.78□□□□□ -1.96
USE1YGL098W RPB7P34087 171 aa2.78□□□□□ -1.96
USE1YGL098W YPT10P38146 199 aa2.78□□□□□ -1.96
USE1YGL098W ECM34P38728 170 aa2.78□□□□□ -1.96
USE1YGL098W PCL5P38794 229 aa2.78□□□□□ -1.96
USE1YGL098W ELO1P39540 310 aa2.78□□□□□ -1.96
USE1YGL098W ERG28P40030 148 aa2.78□□□□□ -1.96
USE1YGL098W YER181CP40097 107 aa2.78□□□□□ -1.96
USE1YGL098W BUD8P41698 603 aa2.78□□□□□ -1.96
USE1YGL098W OYE3P41816 400 aaPredicted RBP2.78□□□□□ -1.96
USE1YGL098W CWP2P43497 92 aa2.78□□□□□ -1.96
USE1YGL098W GON7P46984 123 aa2.78□□□□□ -1.96
USE1YGL098W YJL118WP47022 219 aa2.78□□□□□ -1.96
USE1YGL098W YIP5P53108 310 aa2.78□□□□□ -1.96
USE1YGL098W CAX4P53223 239 aa2.78□□□□□ -1.96
USE1YGL098W TPC1P53257 314 aa2.78□□□□□ -1.96
USE1YGL098W CRH1P53301 507 aa2.78□□□□□ -1.96
USE1YGL098W TRM112P53738 135 aaPredicted RBP2.78□□□□□ -1.96
USE1YGL098W POP3P53833 195 aaPredicted RBP2.78□□□□□ -1.96
USE1YGL098W AIM11P87275 137 aa2.78□□□□□ -1.96
USE1YGL098W MRPL1Q04599 285 aa2.78□□□□□ -1.96
USE1YGL098W DIC1Q06143 298 aa2.78□□□□□ -1.96
USE1YGL098W OPI10Q08202 246 aa2.78□□□□□ -1.96
USE1YGL098W MSI1P13712 422 aa2.77□□□□□ -1.97
USE1YGL098W CUP2P15315 225 aa2.77□□□□□ -1.97
USE1YGL098W STE18P18852 110 aa2.77□□□□□ -1.97
USE1YGL098W PDE1P22434 369 aa2.77□□□□□ -1.97
USE1YGL098W YCR085WP25650 117 aa2.77□□□□□ -1.97
USE1YGL098W QRI5P32344 111 aa2.77□□□□□ -1.97
USE1YGL098W ERG2P32352 222 aa2.77□□□□□ -1.97
USE1YGL098W TIM12P32830 109 aa2.77□□□□□ -1.97
USE1YGL098W YBL059WP34224 193 aa2.77□□□□□ -1.97
USE1YGL098W APS1P35181 156 aa2.77□□□□□ -1.97
USE1YGL098W GCS1P35197 352 aa2.77□□□□□ -1.97
USE1YGL098W MOH1P38191 138 aa2.77□□□□□ -1.97
USE1YGL098W IML3P38265 245 aa2.77□□□□□ -1.97
USE1YGL098W GGC1P38988 300 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms