RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W KTI11Q3E840 82 aa1□□□□□ -2.25
MSN5YDR335W YCL021W-AQ96VH3 125 aa1□□□□□ -2.25
MSN5YDR335W AUS1Q08409 1394 aa1□□□□□ -2.25
MSN5YDR335W TIM9O74700 87 aa1□□□□□ -2.25
MSN5YDR335W RAD6P06104 172 aa1□□□□□ -2.25
MSN5YDR335W YER039C-AP0CD97 72 aa1□□□□□ -2.25
MSN5YDR335W SHE2P36068 246 aaKnown RBP RIP-Chip data1□□□□□ -2.25not detected
MSN5YDR335W UTP30P36144 274 aaKnown RBP1□□□□□ -2.25
MSN5YDR335W LSM12P38828 187 aaKnown RBP1□□□□□ -2.25
MSN5YDR335W RBL2P48606 106 aaKnown RBP1□□□□□ -2.25
MSN5YDR335W AIF1P52923 378 aa1□□□□□ -2.25
MSN5YDR335W YGL230CP53074 147 aa1□□□□□ -2.25
MSN5YDR335W YDR366CP87287 132 aa1□□□□□ -2.25
MSN5YDR335W TIM22Q12328 207 aa1□□□□□ -2.25
MSN5YDR335W JID1Q12350 301 aa1□□□□□ -2.25
MSN5YDR335W HUT1Q12520 339 aa1□□□□□ -2.25
MSN5YDR335W YAL067W-AQ8TGK6 75 aa1□□□□□ -2.25
MSN5YDR335W ECM29P38737 1868 aa0.99□□□□□ -2.25
MSN5YDR335W RIF1P29539 1916 aa0.99□□□□□ -2.25
MSN5YDR335W FMP49A0A023PZB3 126 aa0.99□□□□□ -2.25
MSN5YDR335W YFL068WP0CX99 160 aa0.99□□□□□ -2.25
MSN5YDR335W YLL066W-AP0CY00 160 aa0.99□□□□□ -2.25
MSN5YDR335W YLL067W-AP0CY01 160 aa0.99□□□□□ -2.25
MSN5YDR335W UBC5P15732 148 aa0.99□□□□□ -2.25
MSN5YDR335W YKR070WP36151 352 aaKnown RBP0.99□□□□□ -2.25
MSN5YDR335W YBR090CP38253 122 aa0.99□□□□□ -2.25
MSN5YDR335W ECM34P38728 170 aa0.99□□□□□ -2.25
MSN5YDR335W VMA7P39111 118 aa0.99□□□□□ -2.25
MSN5YDR335W HAL1Q01766 294 aa0.99□□□□□ -2.25
MSN5YDR335W VPS71Q03433 280 aa0.99□□□□□ -2.25
MSN5YDR335W TMA23Q03525 211 aa0.99□□□□□ -2.25
MSN5YDR335W YHP1Q04116 353 aa0.99□□□□□ -2.25
MSN5YDR335W GAL83Q04739 417 aa0.99□□□□□ -2.25
MSN5YDR335W YDL180WQ12301 547 aa0.99□□□□□ -2.25
MSN5YDR335W RTR2Q12378 196 aa0.99□□□□□ -2.25
MSN5YDR335W DGK1Q12382 290 aa0.99□□□□□ -2.25
MSN5YDR335W MPD1Q12404 318 aaKnown RBP0.99□□□□□ -2.25
MSN5YDR335W GRX2P17695 143 aaKnown RBP0.99□□□□□ -2.25
MSN5YDR335W YKR032WP36127 104 aa0.99□□□□□ -2.25
MSN5YDR335W ASP1P38986 381 aaPredicted RBP0.99□□□□□ -2.25
MSN5YDR335W PGD1P40356 397 aa0.99□□□□□ -2.25
MSN5YDR335W PFS2P42841 465 aaKnown RBP0.99□□□□□ -2.25
MSN5YDR335W YMR320WQ04897 101 aa0.99□□□□□ -2.25
MSN5YDR335W IES3Q12345 250 aa0.99□□□□□ -2.25
MSN5YDR335W KRE5P22023 1365 aa0.99□□□□□ -2.25
MSN5YDR335W YAR023CD6VPM8 179 aa0.99□□□□□ -2.25
MSN5YDR335W CPA1P07258 411 aaKnown RBP0.99□□□□□ -2.25
MSN5YDR335W ATP5P09457 212 aa0.99□□□□□ -2.25
MSN5YDR335W URA5P13298 226 aaKnown RBP0.99□□□□□ -2.25
MSN5YDR335W ERD2P18414 219 aa0.99□□□□□ -2.25
MSN5YDR335W YPT31P38555 223 aaKnown RBP0.99□□□□□ -2.25
MSN5YDR335W NSG1P38837 291 aa0.99□□□□□ -2.25
MSN5YDR335W PTI1P39927 425 aaPredicted RBP0.99□□□□□ -2.25
MSN5YDR335W SER2P42941 309 aa0.99□□□□□ -2.25
MSN5YDR335W DSK2P48510 373 aa0.99□□□□□ -2.25
MSN5YDR335W SAY1P53324 424 aa0.99□□□□□ -2.25
MSN5YDR335W APS2Q00381 147 aa0.99□□□□□ -2.25
MSN5YDR335W CNL1Q06333 122 aa0.99□□□□□ -2.25
MSN5YDR335W FSF1Q12029 327 aaKnown RBP0.99□□□□□ -2.25
MSN5YDR335W YOR214CQ12282 236 aa0.99□□□□□ -2.25
MSN5YDR335W ECO1P43605 281 aa0.98□□□□□ -2.25
MSN5YDR335W EMC4P53073 190 aa0.98□□□□□ -2.25
MSN5YDR335W YGR039WP53225 103 aa0.98□□□□□ -2.25
MSN5YDR335W YNL010WP53981 241 aaKnown RBP0.98□□□□□ -2.25
MSN5YDR335W SAE3P89114 91 aa0.98□□□□□ -2.25
MSN5YDR335W YMR295CQ03559 197 aa0.98□□□□□ -2.25
MSN5YDR335W YPL229WQ99395 206 aa0.98□□□□□ -2.25
MSN5YDR335W MYO1P08964 1928 aa0.98□□□□□ -2.25
MSN5YDR335W HIS3P06633 220 aa0.98□□□□□ -2.25
MSN5YDR335W SPO13P23624 291 aa0.98□□□□□ -2.25
MSN5YDR335W PAM17P36147 197 aa0.98□□□□□ -2.25
MSN5YDR335W SWD3P38123 315 aa0.98□□□□□ -2.25
MSN5YDR335W SHE1P38200 338 aa0.98□□□□□ -2.25
MSN5YDR335W MOB1P40484 314 aa0.98□□□□□ -2.25
MSN5YDR335W SYS1P41544 203 aa0.98□□□□□ -2.25
MSN5YDR335W CUP9P41817 306 aa0.98□□□□□ -2.25
MSN5YDR335W GON7P46984 123 aa0.98□□□□□ -2.25
MSN5YDR335W RPS12P48589 143 aaKnown RBP0.98□□□□□ -2.25
MSN5YDR335W RSM27P53305 110 aa0.98□□□□□ -2.25
MSN5YDR335W DML1Q03652 475 aa0.98□□□□□ -2.25
MSN5YDR335W TSA2Q04120 196 aa0.98□□□□□ -2.25
MSN5YDR335W RPC19P28000 142 aaKnown RBP0.97□□□□□ -2.25
MSN5YDR335W AHT1P29589 182 aa0.97□□□□□ -2.25
MSN5YDR335W TEM1P38987 245 aa0.97□□□□□ -2.25
MSN5YDR335W ARC15P40518 154 aaRIP-Chip data0.97□□□□□ -2.25not detected
MSN5YDR335W PAC10P48363 199 aa0.97□□□□□ -2.25
MSN5YDR335W YGR017WP53210 297 aa0.97□□□□□ -2.25
MSN5YDR335W PGA1P53896 198 aa0.97□□□□□ -2.25
MSN5YDR335W SMD1Q02260 146 aaPredicted RBP0.97□□□□□ -2.25
MSN5YDR335W MRPS16Q02608 121 aa0.97□□□□□ -2.25
MSN5YDR335W MEU1Q07938 337 aaKnown RBP RIP-Chip data0.97□□□□□ -2.25not detected
MSN5YDR335W WIP1Q2V2P8 89 aa0.97□□□□□ -2.25
MSN5YDR335W ISD11Q6Q560 94 aa0.97□□□□□ -2.25
MSN5YDR335W YLR462WO13556 202 aa0.97□□□□□ -2.25
MSN5YDR335W CNB1P25296 175 aa0.97□□□□□ -2.25
MSN5YDR335W YHR125WP38831 101 aa0.97□□□□□ -2.25
MSN5YDR335W YND1P40009 630 aa0.97□□□□□ -2.25
MSN5YDR335W DLS1P40366 167 aa0.97□□□□□ -2.25
MSN5YDR335W SPG1P50088 95 aa0.97□□□□□ -2.25
MSN5YDR335W YGL260WP53056 76 aa0.97□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms