RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSN9, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSN9YDR179C MRPS17Q03246 237 aaPredicted RBP-0.46□□□□□ -2.48
CSN9YDR179C ARO80Q04052 950 aa-0.46□□□□□ -2.48
CSN9YDR179C YOR214CQ12282 236 aa-0.46□□□□□ -2.48
CSN9YDR179C MPD1Q12404 318 aaKnown RBP-0.46□□□□□ -2.48
CSN9YDR179C HYP2P23301 157 aaKnown RBP-0.47□□□□□ -2.48
CSN9YDR179C SPT14P32363 452 aa-0.47□□□□□ -2.48
CSN9YDR179C ECM31P38122 312 aa-0.47□□□□□ -2.48
CSN9YDR179C ATG8P38182 117 aaRIP-Chip data-0.47□□□□□ -2.48not detected
CSN9YDR179C YEL073CP39974 107 aa-0.47□□□□□ -2.48
CSN9YDR179C FMN1Q03778 218 aa-0.47□□□□□ -2.48
CSN9YDR179C YPR127WQ06494 345 aa-0.47□□□□□ -2.48
CSN9YDR179C YOL024WQ08172 172 aa-0.47□□□□□ -2.48
CSN9YDR179C FYV4P38783 130 aaPredicted RBP-0.48□□□□□ -2.49
CSN9YDR179C YJL009WP47078 108 aa-0.48□□□□□ -2.49
CSN9YDR179C TIM13P53299 105 aa-0.48□□□□□ -2.49
CSN9YDR179C RAD6P06104 172 aa-0.49□□□□□ -2.49
CSN9YDR179C MVB12P42939 101 aa-0.49□□□□□ -2.49
CSN9YDR179C FMP32P43557 207 aa-0.49□□□□□ -2.49
CSN9YDR179C AIM34Q03673 198 aa-0.49□□□□□ -2.49
CSN9YDR179C RIB3Q99258 208 aa-0.49□□□□□ -2.49
CSN9YDR179C YLR422WQ06409 1932 aa-0.5□□□□□ -2.49
CSN9YDR179C PHO13P19881 312 aa-0.5□□□□□ -2.49
CSN9YDR179C YEL014CP39999 101 aa-0.5□□□□□ -2.49
CSN9YDR179C YNL200CP40165 246 aaKnown RBP-0.5□□□□□ -2.49
CSN9YDR179C HOP2P53187 214 aa-0.5□□□□□ -2.49
CSN9YDR179C IRC21Q04772 201 aa-0.5□□□□□ -2.49
CSN9YDR179C COA6Q3E846 104 aa-0.5□□□□□ -2.49
CSN9YDR179C GLR1P41921 483 aaKnown RBP-0.51□□□□□ -2.49
CSN9YDR179C PGA2P53903 129 aa-0.51□□□□□ -2.49
CSN9YDR179C SHH4Q06236 168 aa-0.52□□□□□ -2.49
CSN9YDR179C UIP4Q08926 304 aa-0.52□□□□□ -2.49
CSN9YDR179C TRM3Q07527 1436 aa-0.53□□□□□ -2.49
CSN9YDR179C AHC2P25649 128 aa-0.53□□□□□ -2.49
CSN9YDR179C NUF2P33895 451 aa-0.53□□□□□ -2.49
CSN9YDR179C RAD9P14737 1309 aa-0.54□□□□□ -2.5
CSN9YDR179C RPL33AP05744 107 aaKnown RBP-0.54□□□□□ -2.5
CSN9YDR179C INO4P13902 151 aa-0.54□□□□□ -2.5
CSN9YDR179C TRX3P25372 127 aa-0.54□□□□□ -2.5
CSN9YDR179C TAH1P25638 111 aaPredicted RBP-0.54□□□□□ -2.5
CSN9YDR179C CSH1P38287 376 aa-0.54□□□□□ -2.5
CSN9YDR179C LIP1Q03579 150 aa-0.54□□□□□ -2.5
CSN9YDR179C YCL012CQ8J0M4 134 aa-0.54□□□□□ -2.5
CSN9YDR179C CBF1P17106 351 aa-0.55□□□□□ -2.5
CSN9YDR179C YKL102CP34249 101 aa-0.55□□□□□ -2.5
CSN9YDR179C CAF4P36130 643 aa-0.55□□□□□ -2.5
CSN9YDR179C XPT1P47165 209 aa-0.55□□□□□ -2.5
CSN9YDR179C TTI2P47168 421 aa-0.55□□□□□ -2.5
CSN9YDR179C SYM1Q06563 197 aa-0.55□□□□□ -2.5
CSN9YDR179C ATG10Q07879 167 aa-0.55□□□□□ -2.5
CSN9YDR179C BRX1Q08235 291 aaKnown RBP-0.55□□□□□ -2.5
CSN9YDR179C CMC4Q3E7A9 73 aa-0.55□□□□□ -2.5
CSN9YDR179C HUG1Q6Q5K6 68 aa-0.55□□□□□ -2.5
CSN9YDR179C QCR7P00128 127 aa-0.56□□□□□ -2.5
CSN9YDR179C CPR5P35176 225 aa-0.56□□□□□ -2.5
CSN9YDR179C HSP150P32478 413 aa-0.57□□□□□ -2.5
CSN9YDR179C YEL028WP39989 153 aa-0.57□□□□□ -2.5
CSN9YDR179C HPT1Q04178 221 aaKnown RBP-0.57□□□□□ -2.5
CSN9YDR179C NOC4Q06512 552 aaPredicted RBP-0.57□□□□□ -2.5
CSN9YDR179C RIF1P29539 1916 aa-0.58□□□□□ -2.5
CSN9YDR179C MATALPHA2P0CY08 210 aa-0.58□□□□□ -2.5
CSN9YDR179C HMLALPHA2P0CY09 210 aa-0.58□□□□□ -2.5
CSN9YDR179C SRP102P36057 244 aaPredicted RBP-0.58□□□□□ -2.5
CSN9YDR179C YDL241WQ07738 123 aa-0.58□□□□□ -2.5
CSN9YDR179C HSL1P34244 1518 aa-0.59□□□□□ -2.5
CSN9YDR179C SRL3P36167 246 aa-0.59□□□□□ -2.5
CSN9YDR179C YPT31P38555 223 aaKnown RBP-0.59□□□□□ -2.5
CSN9YDR179C NMA1Q06178 401 aaKnown RBP-0.59□□□□□ -2.5
CSN9YDR179C ADE6P38972 1358 aaKnown RBP-0.59□□□□□ -2.5
CSN9YDR179C TAO3P40468 2376 aa-0.6□□□□□ -2.5
CSN9YDR179C ARG80P07249 177 aa-0.6□□□□□ -2.51
CSN9YDR179C GIS3Q12418 502 aa-0.6□□□□□ -2.51
CSN9YDR179C IPI1P38803 334 aaPredicted RBP-0.61□□□□□ -2.51
CSN9YDR179C IPT1P38954 527 aa-0.61□□□□□ -2.51
CSN9YDR179C RNH1Q04740 348 aa-0.61□□□□□ -2.51
CSN9YDR179C YPR114WQ06107 315 aa-0.61□□□□□ -2.51
CSN9YDR179C KTI11Q3E840 82 aa-0.61□□□□□ -2.51
CSN9YDR179C YGL041W-AP0C5N3 154 aa-0.62□□□□□ -2.51
CSN9YDR179C PEX34P25584 144 aa-0.62□□□□□ -2.51
CSN9YDR179C SHG1P38337 142 aa-0.62□□□□□ -2.51
CSN9YDR179C DIE2P50076 525 aa-0.62□□□□□ -2.51
CSN9YDR179C JAC1P53193 184 aa-0.62□□□□□ -2.51
CSN9YDR179C FIT3Q08907 204 aa-0.62□□□□□ -2.51
CSN9YDR179C SNF2P22082 1703 aa-0.62□□□□□ -2.51
CSN9YDR179C RPB4P20433 221 aaPredicted RBP-0.63□□□□□ -2.51
CSN9YDR179C NVJ1P38881 321 aa-0.63□□□□□ -2.51
CSN9YDR179C BLM10P43583 2143 aa-0.63□□□□□ -2.51
CSN9YDR179C EST3Q03096 181 aa-0.63□□□□□ -2.51
CSN9YDR179C GRX8Q05926 109 aa-0.63□□□□□ -2.51
CSN9YDR179C YNR064CP53750 290 aa-0.64□□□□□ -2.51
CSN9YDR179C GPI11Q06636 219 aa-0.64□□□□□ -2.51
CSN9YDR179C PLP1Q04004 230 aa-0.65□□□□□ -2.51
CSN9YDR179C MHF1Q3E835 90 aa-0.65□□□□□ -2.51
CSN9YDR179C YGL014C-AP0C5N1 53 aa-0.66□□□□□ -2.52
CSN9YDR179C MRPL24P36525 258 aaPredicted RBP-0.66□□□□□ -2.52
CSN9YDR179C EMC4P53073 190 aa-0.66□□□□□ -2.52
CSN9YDR179C RCF2P53721 224 aa-0.66□□□□□ -2.52
CSN9YDR179C YDR102CQ03864 110 aa-0.66□□□□□ -2.52
CSN9YDR179C YET3Q07451 203 aa-0.66□□□□□ -2.52
CSN9YDR179C FUN14P18411 198 aa-0.67□□□□□ -2.52
CSN9YDR179C VMA10P48836 114 aaKnown RBP-0.67□□□□□ -2.52
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms