RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	RRP17	Q04031	235 aa	Predicted RBP	3.36	□□□□□ -1.87
SIR2	YDL042C	GIM5	Q04493	163 aa		3.36	□□□□□ -1.87
SIR2	YDL042C	RNH202	Q05635	350 aa		3.36	□□□□□ -1.87
SIR2	YDL042C	NEJ1	Q06148	342 aa		3.36	□□□□□ -1.87
SIR2	YDL042C	YRA1	Q12159	226 aa	Known RBP	3.36	□□□□□ -1.87
SIR2	YDL042C	YOR214C	Q12282	236 aa		3.36	□□□□□ -1.87
SIR2	YDL042C	APA2	P22108	325 aa		3.36	□□□□□ -1.87
SIR2	YDL042C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.36	□□□□□ -1.87	not detected
SIR2	YDL042C	DAD3	P69850	94 aa		3.36	□□□□□ -1.87
SIR2	YDL042C	MRPS8	Q03799	155 aa		3.36	□□□□□ -1.87
SIR2	YDL042C	SPC2	Q04969	178 aa		3.36	□□□□□ -1.87
SIR2	YDL042C	BRX1	Q08235	291 aa	Known RBP	3.36	□□□□□ -1.87
SIR2	YDL042C	MCP1	Q12106	302 aa		3.36	□□□□□ -1.87
SIR2	YDL042C	YHR214C-D	P0CX93	97 aa		3.35	□□□□□ -1.87
SIR2	YDL042C	YGL235W	P53071	178 aa		3.35	□□□□□ -1.87
SIR2	YDL042C	PDR17	P53844	350 aa		3.35	□□□□□ -1.87
SIR2	YDL042C	YDR249C	Q03787	373 aa		3.35	□□□□□ -1.87
SIR2	YDL042C	YPL225W	Q08971	146 aa	Known RBP	3.35	□□□□□ -1.87
SIR2	YDL042C	ATG22	P25568	528 aa		3.34	□□□□□ -1.87
SIR2	YDL042C	PEX4	P29340	183 aa		3.34	□□□□□ -1.87
SIR2	YDL042C	FCY21	P40039	528 aa		3.34	□□□□□ -1.87
SIR2	YDL042C	YHR086W-A	Q3E746	53 aa		3.34	□□□□□ -1.87
SIR2	YDL042C	Q0144	Q9ZZW2	109 aa		3.34	□□□□□ -1.87
SIR2	YDL042C	YFR010W-A	P0C5N0	62 aa		3.33	□□□□□ -1.88
SIR2	YDL042C	GCN3	P14741	305 aa		3.33	□□□□□ -1.88
SIR2	YDL042C	MIX14	Q04341	121 aa		3.33	□□□□□ -1.88
SIR2	YDL042C	TDA8	Q6B2U8	126 aa		3.33	□□□□□ -1.88
SIR2	YDL042C	TIM9	O74700	87 aa		3.33	□□□□□ -1.88
SIR2	YDL042C	PET9	P18239	318 aa	Known RBP	3.33	□□□□□ -1.88
SIR2	YDL042C	TIM12	P32830	109 aa		3.33	□□□□□ -1.88
SIR2	YDL042C	YHR180W	P38868	163 aa		3.33	□□□□□ -1.88
SIR2	YDL042C	IKI1	P38874	309 aa		3.33	□□□□□ -1.88
SIR2	YDL042C	EGD2	P38879	174 aa	Known RBP	3.33	□□□□□ -1.88
SIR2	YDL042C	YPR127W	Q06494	345 aa		3.33	□□□□□ -1.88
SIR2	YDL042C	REP2	P03872	296 aa		3.32	□□□□□ -1.88
SIR2	YDL042C	YOL162W	P0CF19	215 aa		3.32	□□□□□ -1.88
SIR2	YDL042C	FBA1	P14540	359 aa	Known RBP	3.32	□□□□□ -1.88
SIR2	YDL042C	MDH2	P22133	377 aa		3.32	□□□□□ -1.88
SIR2	YDL042C	RFC4	P40339	323 aa	Known RBP	3.32	□□□□□ -1.88
SIR2	YDL042C	YMR226C	Q05016	267 aa	Known RBP	3.32	□□□□□ -1.88
SIR2	YDL042C	YOR343C	Q12484	108 aa		3.32	□□□□□ -1.88
SIR2	YDL042C	SNF4	P12904	322 aa		3.31	□□□□□ -1.88
SIR2	YDL042C	HSP30	P25619	332 aa		3.31	□□□□□ -1.88
SIR2	YDL042C	ERV15	P38312	142 aa		3.31	□□□□□ -1.88
SIR2	YDL042C	YHL037C	P38733	133 aa		3.31	□□□□□ -1.88
SIR2	YDL042C	BAT2	P47176	376 aa	Known RBP	3.31	□□□□□ -1.88
SIR2	YDL042C	YLR156W	P0CE96	114 aa		3.3	□□□□□ -1.88
SIR2	YDL042C	YLR159W	P0CE97	114 aa		3.3	□□□□□ -1.88
SIR2	YDL042C	YLR161W	P0CE98	114 aa		3.3	□□□□□ -1.88
SIR2	YDL042C	NUF2	P33895	451 aa		3.3	□□□□□ -1.88
SIR2	YDL042C	YNR062C	P53748	327 aa		3.3	□□□□□ -1.88
SIR2	YDL042C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.3	□□□□□ -1.88	not detected
SIR2	YDL042C	RIB3	Q99258	208 aa		3.3	□□□□□ -1.88
SIR2	YDL042C	RPL27A	P0C2H6	136 aa	Known RBP	3.3	□□□□□ -1.88
SIR2	YDL042C	RPL27B	P0C2H7	136 aa	Known RBP	3.3	□□□□□ -1.88
SIR2	YDL042C	RFA3	P26755	122 aa	Known RBP	3.3	□□□□□ -1.88
SIR2	YDL042C	TCA17	P32613	152 aa		3.3	□□□□□ -1.88
SIR2	YDL042C	IRC19	Q07843	230 aa		3.3	□□□□□ -1.88
SIR2	YDL042C	SPC3	Q12133	184 aa		3.3	□□□□□ -1.88
SIR2	YDL042C	HTB1	P02293	131 aa	Known RBP	3.29	□□□□□ -1.88
SIR2	YDL042C	HTB2	P02294	131 aa		3.29	□□□□□ -1.88
SIR2	YDL042C	MRPL28	P36527	147 aa		3.29	□□□□□ -1.88
SIR2	YDL042C	SEC72	P39742	193 aa	Known RBP	3.29	□□□□□ -1.88
SIR2	YDL042C	YKE4	P40544	346 aa		3.29	□□□□□ -1.88
SIR2	YDL042C	CDC39	P25655	2108 aa	Known RBP	3.28	□□□□□ -1.88
SIR2	YDL042C	UBC8	P28263	218 aa		3.28	□□□□□ -1.88
SIR2	YDL042C	YGL101W	P53144	215 aa		3.28	□□□□□ -1.88
SIR2	YDL042C	YMR099C	Q03161	297 aa	Known RBP	3.28	□□□□□ -1.88
SIR2	YDL042C	ELP6	Q04868	273 aa		3.28	□□□□□ -1.88
SIR2	YDL042C	YOR289W	Q12012	251 aa	Predicted RBP	3.28	□□□□□ -1.88
SIR2	YDL042C	UTP20	P35194	2493 aa	Known RBP	3.27	□□□□□ -1.89
SIR2	YDL042C	SEC4	P07560	215 aa	Known RBP	3.27	□□□□□ -1.89
SIR2	YDL042C	SPS18	P32572	300 aa		3.27	□□□□□ -1.89
SIR2	YDL042C	RMD6	P39975	231 aa		3.27	□□□□□ -1.89
SIR2	YDL042C	YFL051C	P43552	160 aa		3.27	□□□□□ -1.89
SIR2	YDL042C	COG5	P53951	403 aa		3.27	□□□□□ -1.89
SIR2	YDL042C	DML1	Q03652	475 aa		3.27	□□□□□ -1.89
SIR2	YDL042C	RAF1	Q06891	181 aa		3.27	□□□□□ -1.89
SIR2	YDL042C	USB1	Q12208	290 aa	Known RBP	3.27	□□□□□ -1.89
SIR2	YDL042C	YDL180W	Q12301	547 aa		3.27	□□□□□ -1.89
SIR2	YDL042C	YHR214C-E	Q8TGK0	99 aa		3.27	□□□□□ -1.89
SIR2	YDL042C	SEC16	P48415	2195 aa	Known RBP	3.27	□□□□□ -1.89
SIR2	YDL042C	RPL35A	P0CX84	120 aa	Known RBP	3.27	□□□□□ -1.89
SIR2	YDL042C	RPL35B	P0CX85	120 aa	Known RBP	3.27	□□□□□ -1.89
SIR2	YDL042C	PGD1	P40356	397 aa		3.27	□□□□□ -1.89
SIR2	YDL042C	UIP4	Q08926	304 aa		3.27	□□□□□ -1.89
SIR2	YDL042C	CDC7	P06243	507 aa		3.26	□□□□□ -1.89
SIR2	YDL042C	POP7	P38291	140 aa		3.26	□□□□□ -1.89
SIR2	YDL042C	YBR285W	P38354	144 aa		3.26	□□□□□ -1.89
SIR2	YDL042C	BMT5	P40493	336 aa		3.26	□□□□□ -1.89
SIR2	YDL042C	ERG25	P53045	309 aa		3.26	□□□□□ -1.89
SIR2	YDL042C	PET191	Q02772	108 aa		3.26	□□□□□ -1.89
SIR2	YDL042C	BOL1	Q3E793	110 aa		3.26	□□□□□ -1.89
SIR2	YDL042C	YHR022C	P38763	256 aa		3.25	□□□□□ -1.89
SIR2	YDL042C	YGR050C	P53231	118 aa		3.25	□□□□□ -1.89
SIR2	YDL042C	YDR102C	Q03864	110 aa		3.25	□□□□□ -1.89
SIR2	YDL042C	MHF1	Q3E835	90 aa		3.25	□□□□□ -1.89
SIR2	YDL042C	RPL33B	P41056	107 aa	Known RBP	3.24	□□□□□ -1.89
SIR2	YDL042C	BLM10	P43583	2143 aa		3.24	□□□□□ -1.89
SIR2	YDL042C	PGA1	P53896	198 aa		3.24	□□□□□ -1.89

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms