RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W RDI1Q12434 202 aa3.38□□□□□ -1.87
RER1YCL001W YGL258W-AQ3E740 77 aa3.38□□□□□ -1.87
RER1YCL001W RPL12AP0CX53 165 aaKnown RBP3.37□□□□□ -1.87
RER1YCL001W RPL12BP0CX54 165 aa3.37□□□□□ -1.87
RER1YCL001W STF2P16965 84 aa3.37□□□□□ -1.87
RER1YCL001W MRP17P28778 131 aa3.37□□□□□ -1.87
RER1YCL001W SUA5P32579 426 aa3.37□□□□□ -1.87
RER1YCL001W UTR5P32630 166 aa3.37□□□□□ -1.87
RER1YCL001W ERV15P38312 142 aa3.37□□□□□ -1.87
RER1YCL001W COS8P38723 381 aa3.37□□□□□ -1.87
RER1YCL001W BFR1P38934 470 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87 RIP-Chip
RER1YCL001W COX15P40086 486 aa3.37□□□□□ -1.87
RER1YCL001W YNL194CP40169 301 aa3.37□□□□□ -1.87
RER1YCL001W RPL13BP40212 199 aaKnown RBP3.37□□□□□ -1.87
RER1YCL001W LST8P41318 303 aa3.37□□□□□ -1.87
RER1YCL001W YHP1Q04116 353 aa3.37□□□□□ -1.87
RER1YCL001W FSH2Q05015 223 aa3.37□□□□□ -1.87
RER1YCL001W PRM3Q08931 133 aa3.37□□□□□ -1.87
RER1YCL001W YPS3Q12303 508 aa3.37□□□□□ -1.87
RER1YCL001W RPL13AQ12690 199 aaPredicted RBP3.37□□□□□ -1.87
RER1YCL001W YHR212W-AP0CX91 67 aa3.36□□□□□ -1.87
RER1YCL001W MIC12P38341 106 aa3.36□□□□□ -1.87
RER1YCL001W LSM12P38828 187 aaKnown RBP3.36□□□□□ -1.87
RER1YCL001W YJR012CP47087 207 aa3.36□□□□□ -1.87
RER1YCL001W YJR085CP47131 105 aaKnown RBP3.36□□□□□ -1.87
RER1YCL001W EST3Q03096 181 aa3.36□□□□□ -1.87
RER1YCL001W PBP4Q07362 185 aaKnown RBP3.36□□□□□ -1.87
RER1YCL001W TPI1P00942 248 aaKnown RBP3.35□□□□□ -1.87
RER1YCL001W MIG1P27705 504 aa3.35□□□□□ -1.87
RER1YCL001W FPR2P32472 135 aa3.35□□□□□ -1.87
RER1YCL001W RTC3P38804 111 aaPredicted RBP3.35□□□□□ -1.87
RER1YCL001W WSS1P38838 269 aa3.35□□□□□ -1.87
RER1YCL001W DFG10P40526 253 aa3.35□□□□□ -1.87
RER1YCL001W TOS8P53147 276 aa3.35□□□□□ -1.87
RER1YCL001W YGR050CP53231 118 aa3.35□□□□□ -1.87
RER1YCL001W CRH1P53301 507 aa3.35□□□□□ -1.87
RER1YCL001W VPS28Q02767 242 aa3.35□□□□□ -1.87
RER1YCL001W ATG5Q12380 294 aa3.35□□□□□ -1.87
RER1YCL001W PRM4Q12498 284 aa3.35□□□□□ -1.87
RER1YCL001W TDH1P00360 332 aaKnown RBP3.34□□□□□ -1.87
RER1YCL001W MRPL38P35996 138 aaPredicted RBP3.34□□□□□ -1.87
RER1YCL001W YKL162CP36052 402 aa3.34□□□□□ -1.87
RER1YCL001W YPT31P38555 223 aaKnown RBP3.34□□□□□ -1.87
RER1YCL001W LCB3P47013 409 aa3.34□□□□□ -1.87
RER1YCL001W CAB4P53332 305 aa3.34□□□□□ -1.87
RER1YCL001W YPL264CQ08980 353 aa3.34□□□□□ -1.87
RER1YCL001W YOP1Q12402 180 aa3.34□□□□□ -1.87
RER1YCL001W TFB5Q3E7C1 72 aaPredicted RBP3.34□□□□□ -1.87
RER1YCL001W DOG2P38773 246 aa3.33□□□□□ -1.88
RER1YCL001W DOG1P38774 246 aa3.33□□□□□ -1.88
RER1YCL001W AIM24P47127 394 aa3.33□□□□□ -1.88
RER1YCL001W HCH1P53834 153 aa3.33□□□□□ -1.88
RER1YCL001W EOS1P53938 366 aa3.33□□□□□ -1.88
RER1YCL001W FRQ1Q06389 190 aa3.33□□□□□ -1.88
RER1YCL001W FEX2Q08991 375 aa3.33□□□□□ -1.88
RER1YCL001W COX2P00410 251 aa3.32□□□□□ -1.88
RER1YCL001W PIS1P06197 220 aaKnown RBP3.32□□□□□ -1.88
RER1YCL001W YPS1P32329 569 aa3.32□□□□□ -1.88
RER1YCL001W PDC2P32896 925 aa3.32□□□□□ -1.88
RER1YCL001W MID2P36027 376 aa3.32□□□□□ -1.88
RER1YCL001W SDH4P37298 181 aa3.32□□□□□ -1.88
RER1YCL001W YBL071CP38185 102 aa3.32□□□□□ -1.88
RER1YCL001W SLM6P38343 150 aa3.32□□□□□ -1.88
RER1YCL001W NSA2P40078 261 aaKnown RBP3.32□□□□□ -1.88
RER1YCL001W YIR035CP40579 254 aa3.32□□□□□ -1.88
RER1YCL001W HAC1P41546 238 aa3.32□□□□□ -1.88
RER1YCL001W SWT21P53873 357 aaPredicted RBP3.32□□□□□ -1.88
RER1YCL001W DYN2Q02647 92 aa3.32□□□□□ -1.88
RER1YCL001W LDS2Q08218 356 aa3.32□□□□□ -1.88
RER1YCL001W IRC23Q08416 157 aa3.32□□□□□ -1.88
RER1YCL001W FEX1Q08913 375 aa3.32□□□□□ -1.88
RER1YCL001W AIM45Q12480 344 aaKnown RBP3.32□□□□□ -1.88
RER1YCL001W YCR024C-BQ3E7Z8 88 aa3.32□□□□□ -1.88
RER1YCL001W COA2Q3E823 68 aa3.32□□□□□ -1.88
RER1YCL001W YDR157WA0A023PZE8 133 aa3.31□□□□□ -1.88
RER1YCL001W PET494P07390 489 aaPredicted RBP3.31□□□□□ -1.88
RER1YCL001W GRX2P17695 143 aaKnown RBP3.31□□□□□ -1.88
RER1YCL001W CKS1P20486 150 aaKnown RBP3.31□□□□□ -1.88
RER1YCL001W MRS4P23500 304 aa3.31□□□□□ -1.88
RER1YCL001W ALK2P32789 676 aaPredicted RBP3.31□□□□□ -1.88
RER1YCL001W PPQ1P32945 549 aa3.31□□□□□ -1.88
RER1YCL001W DAD2P36162 133 aa3.31□□□□□ -1.88
RER1YCL001W CSH1P38287 376 aa3.31□□□□□ -1.88
RER1YCL001W RRF1P38771 230 aa3.31□□□□□ -1.88
RER1YCL001W MPC2P38857 129 aa3.31□□□□□ -1.88
RER1YCL001W YAR068WP39564 161 aa3.31□□□□□ -1.88
RER1YCL001W BDH1P39714 382 aa3.31□□□□□ -1.88
RER1YCL001W MST27P53176 234 aa3.31□□□□□ -1.88
RER1YCL001W YGR018CP53211 109 aa3.31□□□□□ -1.88
RER1YCL001W ORM1P53224 222 aa3.31□□□□□ -1.88
RER1YCL001W CPD1P53314 239 aa3.31□□□□□ -1.88
RER1YCL001W PDR17P53844 350 aa3.31□□□□□ -1.88
RER1YCL001W YMR090WQ04304 227 aaKnown RBP3.31□□□□□ -1.88
RER1YCL001W URA5P13298 226 aaKnown RBP3.3□□□□□ -1.88
RER1YCL001W SEC22P22214 214 aa3.3□□□□□ -1.88
RER1YCL001W TOA2P32774 122 aa3.3□□□□□ -1.88
RER1YCL001W RRT1P38192 103 aa3.3□□□□□ -1.88
RER1YCL001W YEA6P39953 335 aa3.3□□□□□ -1.88
RER1YCL001W POR2P40478 281 aa3.3□□□□□ -1.88
RER1YCL001W YFR057WP43625 151 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 51 ms