RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 VEPH1Q14D04 833 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 ZNF772Q68DY9 489 aaPredicted RBP13.65□□□□□ -0.22
UBE3A-228ENST00000638155 ENTPD7Q9NQZ7 604 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 MCM8Q9UJA3 840 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 PDS5AQ29RF7 1337 aaKnown RBP13.65□□□□□ -0.22
UBE3A-228ENST00000638155 CCT8L1PA6NM43 557 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 H3BMM5 538 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 ZNF682O95780 498 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 ARF3P61204 181 aaPredicted RBP13.65□□□□□ -0.22
UBE3A-228ENST00000638155 ST8SIA6P61647 398 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 ARF1P84077 181 aaKnown RBP13.65□□□□□ -0.22
UBE3A-228ENST00000638155 SCARA3Q6AZY7 606 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 ZNF438Q7Z4V0 828 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 CROCCP3Q8IVE0 287 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 SYTL1Q8IYJ3 562 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 WDR60Q8WVS4 1066 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 VPS33AQ96AX1 596 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 FAR2Q96K12 515 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 C11orf70Q9BRQ4 267 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 CCDC59Q9P031 241 aaKnown RBP13.65□□□□□ -0.22
UBE3A-228ENST00000638155 ATPIF1Q9UII2 106 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 POLR1DQ9Y2S0 133 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 A0A0D9SFI3 127 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 FAM92AA1XBS5 289 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 SPAG6O75602 509 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 SMNDC1O75940 238 aaKnown RBP eCLIP13.65□□□□□ -0.22
UBE3A-228ENST00000638155 TARSP26639 723 aaKnown RBP13.65□□□□□ -0.22
UBE3A-228ENST00000638155 HAVCR1Q96D42 359 aa13.65□□□□□ -0.22
UBE3A-228ENST00000638155 FAM49AQ9H0Q0 323 aaPredicted RBP13.65□□□□□ -0.22
UBE3A-228ENST00000638155 HEATR9A2RTY3 570 aa13.65□□□□□ -0.23
UBE3A-228ENST00000638155 LGALS16A8MUM7 142 aa13.65□□□□□ -0.23
UBE3A-228ENST00000638155 ZBTB7BO15156 539 aaPredicted RBP13.65□□□□□ -0.23
UBE3A-228ENST00000638155 TRAF3Q13114 568 aa13.65□□□□□ -0.23
UBE3A-228ENST00000638155 EFR3AQ14156 821 aa13.65□□□□□ -0.23
UBE3A-228ENST00000638155 SNX13Q9Y5W8 968 aa13.65□□□□□ -0.23
UBE3A-228ENST00000638155 PTK6Q13882 451 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 BTBD8Q5XKL5 378 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 TMC4Q7Z404 712 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 TRIM48Q8IWZ4 208 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 TMEM79Q9BSE2 394 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 AREL1O15033 823 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 RAD51BO15315 384 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 ERN1O75460 977 aaKnown RBP13.64□□□□□ -0.23
UBE3A-228ENST00000638155 HSD3B2P26439 372 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 CASP12Q6UXS9 341 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 TSPYL6Q8N831 410 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 TNIP3Q96KP6 325 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 ABATP80404 500 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 TWF1Q12792 350 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 ZCCHC8Q6NZY4 707 aaKnown RBP13.64□□□□□ -0.23
UBE3A-228ENST00000638155 SAMD3Q8N6K7 520 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 ATL2Q8NHH9 583 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 TMEM138Q9NPI0 162 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 FAM20BO75063 409 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 ZCCHC18P0CG32 403 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 PSMB9P28065 219 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 KCNJ6P48051 423 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 LPIN1Q14693 890 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 SMCO1Q147U7 214 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 CCSAPQ6IQ19 270 aaPredicted RBP13.64□□□□□ -0.23
UBE3A-228ENST00000638155 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.64□□□□□ -0.23
UBE3A-228ENST00000638155 DSN1Q9H410 356 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 LIMA1Q9UHB6 759 aaKnown RBP13.64□□□□□ -0.23
UBE3A-228ENST00000638155 MYH11P35749 1972 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 KCNT1Q5JUK3 1230 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 PROSER1Q86XN7 944 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 NOD2Q9HC29 1040 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 BLMP54132 1417 aaPredicted RBP13.64□□□□□ -0.23
UBE3A-228ENST00000638155 P4HA2O15460 535 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 POLBP06746 335 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 ADORA2BP29275 332 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 SPRP35270 261 aaPredicted RBP13.64□□□□□ -0.23
UBE3A-228ENST00000638155 SLC1A1P43005 524 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 SRP54P61011 504 aaKnown RBP13.64□□□□□ -0.23
UBE3A-228ENST00000638155 RALGDSQ12967 914 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 NLRP10Q86W26 655 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 C1orf50Q9BV19 199 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 MUC3BQ9H195 1237 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 MAP3K20Q9NYL2 800 aaKnown RBP13.64□□□□□ -0.23
UBE3A-228ENST00000638155 PARD3Q8TEW0 1356 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 ANKRD12Q6UB98 2062 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 IDH3BO43837 385 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 KPNA6O60684 536 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 CBFA2T3O75081 653 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 MOCS2O96007 188 aaPredicted RBP13.64□□□□□ -0.23
UBE3A-228ENST00000638155 PEX3P56589 373 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 RESTQ13127 1097 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 PID1Q7Z2X4 250 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 FAM9CQ8IZT9 166 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 FAM167AQ96KS9 214 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 B3GALT6Q96L58 329 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 ACAD9Q9H845 621 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 ING4Q9UNL4 249 aa13.64□□□□□ -0.23
UBE3A-228ENST00000638155 POLR3AO14802 1390 aaPredicted RBP13.64□□□□□ -0.23
UBE3A-228ENST00000638155 PHF20L1A8MW92 1017 aa13.63□□□□□ -0.23
UBE3A-228ENST00000638155 MYL12BO14950 172 aa13.63□□□□□ -0.23
UBE3A-228ENST00000638155 RUNDC3AQ59EK9 446 aa13.63□□□□□ -0.23
UBE3A-228ENST00000638155 GPD1LQ8N335 351 aa13.63□□□□□ -0.23
UBE3A-228ENST00000638155 ATG16L2Q8NAA4 619 aa13.63□□□□□ -0.23
UBE3A-228ENST00000638155 ZNF671Q8TAW3 534 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms