RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 LINC00301Q8NCQ3 95 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 PAGE5Q96GU1 130 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 CACNA2D2Q9NY47 1150 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 APPL1Q9UKG1 709 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 DYRK1BQ9Y463 629 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 ARHGEF40Q8TER5 1519 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 SNAP23O00161 211 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 IGSF6O95976 241 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 VIL1P09327 827 aaKnown RBP11.6□□□□□ -0.55
VPS8-227ENST00000625842 IL1R1P14778 569 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 YWHAQP27348 245 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 GTF2E2P29084 291 aaKnown RBP11.6□□□□□ -0.55
VPS8-227ENST00000625842 NDUFA8P51970 172 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 MAPRE2Q15555 327 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 TCEA2Q15560 299 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 PCNX4Q63HM2 1172 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 PASD1Q8IV76 773 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 CAMKK1Q8N5S9 505 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 CHAMP1Q96JM3 812 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 MAF1Q9H063 256 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 TNNI3P19429 210 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 PPP3CCP48454 512 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 GEMP55040 296 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 MORF4L2Q15014 288 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 SUZ12Q15022 739 aaKnown RBP11.6□□□□□ -0.55
VPS8-227ENST00000625842 RBBP7Q16576 425 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 INTS5Q6P9B9 1019 aaKnown RBP11.6□□□□□ -0.55
VPS8-227ENST00000625842 MTSS1LQ765P7 747 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 BSNDQ8WZ55 320 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 L3MBTL3Q96JM7 780 aaPredicted RBP11.6□□□□□ -0.55
VPS8-227ENST00000625842 TSPAN18Q96SJ8 248 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 MKNK1Q9BUB5 465 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 POLR3CQ9BUI4 534 aaPredicted RBP11.6□□□□□ -0.55
VPS8-227ENST00000625842 OSGEPL1Q9H4B0 414 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 KRCC1Q9NPI7 259 aaPredicted RBP11.6□□□□□ -0.55
VPS8-227ENST00000625842 TXNDC9O14530 226 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 BCAT1P54687 386 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 BOLA3Q53S33 107 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 TMCO4Q5TGY1 634 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 TMEM164Q5U3C3 297 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 SNX30Q5VWJ9 437 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 ZNF544Q6NX49 715 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 TCF25Q9BQ70 676 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 EPC1Q9H2F5 836 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 C11orf49Q9H6J7 331 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 YY1AP1Q9H869 796 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.6□□□□□ -0.55
VPS8-227ENST00000625842 ABI3Q9P2A4 366 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 GGT7Q9UJ14 662 aa11.6□□□□□ -0.55
VPS8-227ENST00000625842 FAM32AQ9Y421 112 aaKnown RBP11.6□□□□□ -0.55
VPS8-227ENST00000625842 LRRC53A6NM62 1247 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 INPP4BO15327 924 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 VGLL4Q14135 290 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 ELF2Q15723 593 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 REPS2Q8NFH8 660 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 MAGEC3Q8TD91 643 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 CNPPD1Q9BV87 410 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 SETD4Q9NVD3 440 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 PACSIN2Q9UNF0 486 aaPredicted RBP11.59□□□□□ -0.55
VPS8-227ENST00000625842 ZNF711Q9Y462 761 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 PITPNM2Q9BZ72 1349 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 RBAK-RBAKDNI3L0D1 243 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 COPEO14579 308 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 CFLARO15519 480 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 ATG13O75143 517 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 GCATO75600 419 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 APODP05090 189 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 FGFR2P21802 821 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 MAP3K10Q02779 954 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 FPGSQ05932 587 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 SNRNP35Q16560 246 aaKnown RBP11.59□□□□□ -0.55
VPS8-227ENST00000625842 TCP11X2Q5H9J9 407 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 ZC3H12BQ5HYM0 836 aaKnown RBP11.59□□□□□ -0.55
VPS8-227ENST00000625842 NAA35Q5VZE5 725 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 MRNIPQ6NTE8 343 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 MIB1Q86YT6 1006 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 TMCO5AQ8N6Q1 288 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 CFAP61Q8NHU2 1237 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 KCNB2Q92953 911 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 PHF21AQ96BD5 680 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 TMA16Q96EY4 203 aaKnown RBP11.59□□□□□ -0.55
VPS8-227ENST00000625842 RSRC1Q96IZ7 334 aaKnown RBP11.59□□□□□ -0.55
VPS8-227ENST00000625842 MAGEB10Q96LZ2 347 aaPredicted RBP11.59□□□□□ -0.55
VPS8-227ENST00000625842 ADAM2Q99965 735 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 POLMQ9NP87 494 aaPredicted RBP11.59□□□□□ -0.55
VPS8-227ENST00000625842 AHSPQ9NZD4 102 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 CCDC78A2IDD5 438 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 SYNDIG1LA6NDD5 238 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 TDP2O95551 362 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 ADCYAP1R1P41586 468 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 ACOT2P49753 483 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 PSEN1P49768 467 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 DIP2AQ14689 1571 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 CCDC144BQ3MJ40 725 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 CRLF3Q8IUI8 442 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 TBC1D10CQ8IV04 446 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 RNF10Q8N5U6 811 aaKnown RBP11.59□□□□□ -0.55
VPS8-227ENST00000625842 ZNF564Q8TBZ8 553 aaPredicted RBP11.59□□□□□ -0.55
VPS8-227ENST00000625842 MGARPQ8TDB4 240 aa11.59□□□□□ -0.55
VPS8-227ENST00000625842 MYCBPQ99417 103 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms