RNA–Protein interactions for RNA: ENST00000618970.4

PDCD6-213, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-213ENST00000618970 ZNF560Q96MR9 790 aa14.38□□□□□ -0.11
PDCD6-213ENST00000618970 SDCBP2Q9H190 292 aa14.38□□□□□ -0.11
PDCD6-213ENST00000618970 NDST4Q9H3R1 872 aa14.38□□□□□ -0.11
PDCD6-213ENST00000618970 TAB2Q9NYJ8 693 aa14.38□□□□□ -0.11
PDCD6-213ENST00000618970 L1RE1Q9UN81 338 aa14.38□□□□□ -0.11
PDCD6-213ENST00000618970 POLIQ9UNA4 740 aa14.38□□□□□ -0.11
PDCD6-213ENST00000618970 NUB1Q9Y5A7 615 aa14.38□□□□□ -0.11
PDCD6-213ENST00000618970 TIMM13Q9Y5L4 95 aaPredicted RBP14.38□□□□□ -0.11
PDCD6-213ENST00000618970 CFAP54Q96N23 3096 aa14.38□□□□□ -0.11
PDCD6-213ENST00000618970 SF3B1O75533 1304 aaKnown RBP eCLIP14.38□□□□□ -0.112e-6■■■■■ 103.4
PDCD6-213ENST00000618970 PTPRDP23468 1912 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 VPS13AQ96RL7 3174 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 CYB561D2O14569 222 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 TRAPPC3O43617 180 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 PRKCSHP14314 528 aaPredicted RBP14.37□□□□□ -0.11
PDCD6-213ENST00000618970 TYMPP19971 482 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 ITIH3Q06033 890 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 SOWAHAQ2M3V2 549 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 CES5AQ6NT32 575 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 PRSS55Q6UWB4 352 aaPredicted RBP14.37□□□□□ -0.11
PDCD6-213ENST00000618970 RSPO2Q6UXX9 243 aaPredicted RBP14.37□□□□□ -0.11
PDCD6-213ENST00000618970 DSTYKQ6XUX3 929 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 KREMEN2Q8NCW0 462 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 PIK3R5Q8WYR1 880 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 TAF4BQ92750 862 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 RTP3Q9BQQ7 232 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 TTPALQ9BTX7 342 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 VPS16Q9H269 839 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 SMOC2Q9H3U7 446 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 RXFP1Q9HBX9 757 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 MAGEC2Q9UBF1 373 aaPredicted RBP14.37□□□□□ -0.11
PDCD6-213ENST00000618970 NR2E1Q9Y466 385 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 SNX9Q9Y5X1 595 aa14.37□□□□□ -0.11
PDCD6-213ENST00000618970 C2orf16Q68DN1 1984 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 GTPBP10A4D1E9 387 aaKnown RBP14.36□□□□□ -0.11
PDCD6-213ENST00000618970 BECN2A8MW95 431 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 GABRDO14764 452 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 N4BP1O75113 896 aaKnown RBP14.36□□□□□ -0.11
PDCD6-213ENST00000618970 OAZ2O95190 189 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 SLC9A1P19634 815 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 PIK3CAP42336 1068 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 ASPAP45381 313 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 GLUD2P49448 558 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 PTPN5P54829 565 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 MYL7Q01449 175 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 MYO1EQ12965 1108 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 ZNF699Q32M78 642 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 WDR72Q3MJ13 1102 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 VARS2Q5ST30 1063 aaKnown RBP14.36□□□□□ -0.11
PDCD6-213ENST00000618970 WSCD1Q658N2 575 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 DPH6Q7L8W6 267 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 TOP6BLQ8N6T0 577 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 SLC22A17Q8WUG5 538 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 KBTBD7Q8WVZ9 684 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 NAP1L5Q96NT1 182 aaPredicted RBP14.36□□□□□ -0.11
PDCD6-213ENST00000618970 NECTIN4Q96NY8 510 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 MRPL45Q9BRJ2 306 aaKnown RBP14.36□□□□□ -0.11
PDCD6-213ENST00000618970 RBSNQ9H1K0 784 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 SIX2Q9NPC8 291 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.36□□□□□ -0.119e-7■■■■■ 53.5
PDCD6-213ENST00000618970 STK39Q9UEW8 545 aa14.36□□□□□ -0.11
PDCD6-213ENST00000618970 ADAM12O43184 909 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 HCRTO43612 131 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 TACC1O75410 805 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 FAM163BP0C2L3 166 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 CDK11BP21127 795 aaKnown RBP14.35□□□□□ -0.11
PDCD6-213ENST00000618970 MTHFRP42898 656 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 CDH8P55286 799 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 NOP14P78316 857 aaKnown RBP14.35□□□□□ -0.11
PDCD6-213ENST00000618970 APBA1Q02410 837 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 BMS1Q14692 1282 aaKnown RBP14.35□□□□□ -0.11
PDCD6-213ENST00000618970 ZNF667Q5HYK9 610 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 KIAA1841Q6NSI8 718 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 PHLDB3Q6NSJ2 640 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 CEP57Q86XR8 500 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 PDCL2Q8N4E4 241 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 UBR7Q8N806 425 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 RNF214Q8ND24 703 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 RIN2Q8WYP3 895 aaPredicted RBP14.35□□□□□ -0.11
PDCD6-213ENST00000618970 KLHL5Q96PQ7 755 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 CLSTN3Q9BQT9 956 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 BCO2Q9BYV7 579 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 RTN4Q9NQC3 1192 aaKnown RBP14.35□□□□□ -0.11
PDCD6-213ENST00000618970 FAM86C1Q9NVL1 165 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 DZANK1Q9NVP4 752 aa14.35□□□□□ -0.11
PDCD6-213ENST00000618970 A0A1B0GTH6 734 aa14.34□□□□□ -0.11
PDCD6-213ENST00000618970 C2CD2LO14523 706 aa14.34□□□□□ -0.11
PDCD6-213ENST00000618970 TEX33O43247 280 aa14.34□□□□□ -0.11
PDCD6-213ENST00000618970 ASGR2P07307 311 aa14.34□□□□□ -0.11
PDCD6-213ENST00000618970 CNPP09543 421 aaKnown RBP14.34□□□□□ -0.11
PDCD6-213ENST00000618970 ODC1P11926 461 aa14.34□□□□□ -0.11
PDCD6-213ENST00000618970 RPL17P18621 184 aaKnown RBP14.34□□□□□ -0.11
PDCD6-213ENST00000618970 WARSP23381 471 aaKnown RBP14.34□□□□□ -0.11
PDCD6-213ENST00000618970 LMO2P25791 158 aa14.34□□□□□ -0.11
PDCD6-213ENST00000618970 PON1P27169 355 aa14.34□□□□□ -0.11
PDCD6-213ENST00000618970 AVPR2P30518 371 aa14.34□□□□□ -0.11
PDCD6-213ENST00000618970 RAP1GAPP47736 663 aa14.34□□□□□ -0.11
PDCD6-213ENST00000618970 MTMR3Q13615 1198 aa14.34□□□□□ -0.11
PDCD6-213ENST00000618970 NR1I3Q14994 352 aa14.34□□□□□ -0.11
PDCD6-213ENST00000618970 ARHGEF19Q8IW93 802 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms