RNA–Protein interactions for RNA: ENST00000563875.1

SNUPN-203, Transcript of snurportin 1, humanhuman

TSL 3

Gene SNUPN, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-203ENST00000563875 STAU1O95793 577 aaKnown RBP12.12□□□□□ -0.47
SNUPN-203ENST00000563875 PDGFBP01127 241 aaPredicted RBP12.12□□□□□ -0.47
SNUPN-203ENST00000563875 ATF6P18850 670 aa12.12□□□□□ -0.47
SNUPN-203ENST00000563875 NR2F2P24468 414 aa12.12□□□□□ -0.47
SNUPN-203ENST00000563875 ACAT1P24752 427 aaKnown RBP12.12□□□□□ -0.47
SNUPN-203ENST00000563875 DLG4P78352 724 aa12.12□□□□□ -0.47
SNUPN-203ENST00000563875 SMARCB1Q12824 385 aa12.12□□□□□ -0.47
SNUPN-203ENST00000563875 PLD1Q13393 1074 aa12.12□□□□□ -0.47
SNUPN-203ENST00000563875 COBLL1Q53SF7 1204 aa12.12□□□□□ -0.47
SNUPN-203ENST00000563875 INTS6LQ5JSJ4 861 aaKnown RBP12.12□□□□□ -0.47
SNUPN-203ENST00000563875 DPH6Q7L8W6 267 aa12.12□□□□□ -0.47
SNUPN-203ENST00000563875 ELMOD1Q8N336 334 aa12.12□□□□□ -0.47
SNUPN-203ENST00000563875 SLC44A3Q8N4M1 653 aa12.12□□□□□ -0.47
SNUPN-203ENST00000563875 SPPL2BQ8TCT7 592 aa12.12□□□□□ -0.47
SNUPN-203ENST00000563875 C2orf15Q8WU43 125 aaKnown RBP12.12□□□□□ -0.47
SNUPN-203ENST00000563875 PSMG2Q969U7 264 aa12.12□□□□□ -0.47
SNUPN-203ENST00000563875 PBXIP1Q96AQ6 731 aa12.12□□□□□ -0.47
SNUPN-203ENST00000563875 CCDC34Q96HJ3 373 aa12.12□□□□□ -0.47
SNUPN-203ENST00000563875 ZNF512Q96ME7 567 aaPredicted RBP12.12□□□□□ -0.47
SNUPN-203ENST00000563875 GSDMAQ96QA5 445 aa12.12□□□□□ -0.47
SNUPN-203ENST00000563875 ACBD6Q9BR61 282 aa12.12□□□□□ -0.47
SNUPN-203ENST00000563875 RPP25Q9BUL9 199 aaKnown RBP12.12□□□□□ -0.47
SNUPN-203ENST00000563875 DDX43Q9NXZ2 648 aaKnown RBP12.12□□□□□ -0.47
SNUPN-203ENST00000563875 GDE1Q9NZC3 331 aa12.12□□□□□ -0.47
SNUPN-203ENST00000563875 PCDHA5Q9Y5H7 936 aa12.12□□□□□ -0.47
SNUPN-203ENST00000563875 NUP210Q8TEM1 1887 aaPredicted RBP12.12□□□□□ -0.47
SNUPN-203ENST00000563875 COL4A2P08572 1712 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 MUC6Q6W4X9 2439 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 ZNF197O14709 1029 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 MAPK13O15264 365 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 AKAP3O75969 853 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 VNN1O95497 513 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 C4BPAP04003 597 aaKnown RBP12.11□□□□□ -0.47
SNUPN-203ENST00000563875 SRFP11831 508 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 WARSP23381 471 aaKnown RBP12.11□□□□□ -0.47
SNUPN-203ENST00000563875 FCARP24071 287 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 PRCPP42785 496 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 ALDH1A3P47895 512 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 LHX1P48742 406 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 EPHB3P54753 998 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 MCCD1P59942 119 aaPredicted RBP12.11□□□□□ -0.47
SNUPN-203ENST00000563875 MYL6P60660 151 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 MYL7Q01449 175 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 TSPY1Q01534 308 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 MAPK8IP2Q13387 824 aaPredicted RBP12.11□□□□□ -0.47
SNUPN-203ENST00000563875 ZACNQ401N2 412 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 ZNF658Q5TYW1 1059 aaPredicted RBP12.11□□□□□ -0.47
SNUPN-203ENST00000563875 CEP135Q66GS9 1140 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 IQCEQ6IPM2 695 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 MTSS1LQ765P7 747 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 PDZD4Q76G19 769 aaPredicted RBP12.11□□□□□ -0.47
SNUPN-203ENST00000563875 ELOA2Q8IYF1 753 aaPredicted RBP12.11□□□□□ -0.47
SNUPN-203ENST00000563875 DCP1BQ8IZD4 617 aaKnown RBP12.11□□□□□ -0.47
SNUPN-203ENST00000563875 FBXL6Q8N531 539 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 LEMD2Q8NC56 503 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 SHKBP1Q8TBC3 707 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 TMC2Q8TDI7 906 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 SEPT5Q99719 369 aaPredicted RBP12.11□□□□□ -0.47
SNUPN-203ENST00000563875 LPIN3Q9BQK8 851 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 VRTNQ9H8Y1 702 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 ZNF334Q9HCZ1 680 aaPredicted RBP12.11□□□□□ -0.47
SNUPN-203ENST00000563875 ASAH2Q9NR71 780 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 RMND1Q9NWS8 449 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 ABI2Q9NYB9 513 aaPredicted RBP12.11□□□□□ -0.47
SNUPN-203ENST00000563875 CHMP5Q9NZZ3 219 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 ASB3Q9Y575 518 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 NME7Q9Y5B8 376 aa12.11□□□□□ -0.47
SNUPN-203ENST00000563875 TACC1O75410 805 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 HAPLN1P10915 354 aaPredicted RBP12.1□□□□□ -0.47
SNUPN-203ENST00000563875 MYL4P12829 197 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 LMO2P25791 158 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 PCSK1P29120 753 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 ATICP31939 592 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 TUFMP49411 452 aaKnown RBP12.1□□□□□ -0.47
SNUPN-203ENST00000563875 AP3M2P53677 418 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 NCOA4Q13772 614 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 NFE2Q16621 373 aaPredicted RBP12.1□□□□□ -0.47
SNUPN-203ENST00000563875 EDRF1Q3B7T1 1238 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 MGAT5BQ3V5L5 792 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 CYP4A22Q5TCH4 519 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 FAM171BQ6P995 826 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 GAREM2Q75VX8 874 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 ZC3H3Q8IXZ2 948 aaKnown RBP12.1□□□□□ -0.47
SNUPN-203ENST00000563875 SMARCE1Q969G3 411 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 MCRS1Q96EZ8 462 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 ZSWIM3Q96MP5 696 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 ASB16Q96NS5 453 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 KXD1Q9BQD3 176 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 MRPL45Q9BRJ2 306 aaKnown RBP12.1□□□□□ -0.47
SNUPN-203ENST00000563875 ABCB6Q9NP58 842 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 GTF3C4Q9UKN8 822 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 FRMD4BQ9Y2L6 1034 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 R3HCC1Q9Y3T6 440 aaKnown RBP12.1□□□□□ -0.47
SNUPN-203ENST00000563875 PCDHB5Q9Y5E4 795 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 USP34Q70CQ2 3546 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 NCANO14594 1321 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 COL4A3Q01955 1670 aa12.1□□□□□ -0.47
SNUPN-203ENST00000563875 KIF26AQ9ULI4 1882 aaPredicted RBP12.09□□□□□ -0.47
SNUPN-203ENST00000563875 MYBPHLA2RUH7 354 aa12.09□□□□□ -0.47
SNUPN-203ENST00000563875 IKBKBO14920 756 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms