RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 LRMDAQ9H2I8 198 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 CLOCKO15516 846 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 TBC1D12O60347 775 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 FCER1AP12319 257 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 ALAS1P13196 640 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 CNTFP26441 200 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 NCKAP1LP55160 1127 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 PSMC6P62333 389 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 TRAF2Q12933 501 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 TUBA3CQ13748 450 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 BLMHQ13867 455 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 PIGHQ14442 188 aaPredicted RBP12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 SF3B3Q15393 1217 aaKnown RBP12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 MIS18BP1Q6P0N0 1132 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 PRMT9Q6P2P2 845 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 ENKURQ8TC29 256 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 OSCP1Q8WVF1 389 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 GDF3Q9NR23 364 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 SPATA2Q9UM82 520 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 RAD51BO15315 384 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 SNX3O60493 162 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 CDH6P55285 790 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 ZNF398Q8TD17 642 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 RORBQ92753 470 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 KLF6Q99612 283 aaPredicted RBP12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 CDC42EP4Q9H3Q1 356 aaKnown RBP12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 NEURL4Q96JN8 1562 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 UTYO14607 1347 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 A0A0A6YYK5 440 aaPredicted RBP12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 DGKIO75912 1065 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 DDHD2O94830 711 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 RTN3O95197 1032 aaPredicted RBP12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 GLI1P08151 1106 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 VAV1P15498 845 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 RAG1P15918 1043 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 TALDO1P37837 337 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 PARP6Q2NL67 630 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 TRIQKQ629K1 86 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 KRT73Q86Y46 540 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 MREGQ8N565 214 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 WNK4Q96J92 1243 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 ZSWIM1Q9BR11 485 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 MYLK2Q9H1R3 596 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 TRIM39Q9HCM9 518 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 RAB6BQ9NRW1 208 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 STAP1Q9ULZ2 295 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 FKBP9O95302 570 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 RECQLP46063 649 aaPredicted RBP12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 DLG4P78352 724 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 RBBP7Q16576 425 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 FKBP9P1Q75LS8 142 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 LRRC8DQ7L1W4 858 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 CCNJLQ8IV13 435 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 RBM46Q8TBY0 533 aaKnown RBP12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 PCSK1NQ9UHG2 260 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 FCHO1O14526 889 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 NUP62P37198 522 aaPredicted RBP12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 BTDP43251 543 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 TRAF3Q13114 568 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 MTFR1Q15390 333 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 ELMSAN1Q6PJG2 1045 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 C7orf31Q8N865 590 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 MCPH1Q8NEM0 835 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 COA7Q96BR5 231 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 TMEM161AQ9NX61 479 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 PRG3Q9Y2Y8 225 aaPredicted RBP12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 POTEMA6NI47 508 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 ATP6V1G1O75348 118 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 NFKBIAP25963 317 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 PIK3R1P27986 724 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 USP10Q14694 798 aaKnown RBP12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 PDZK1Q5T2W1 519 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 PPP4R4Q6NUP7 873 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 TMC3Q7Z5M5 1100 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 DEFB107AQ8IZN7 70 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 SETD9Q8NE22 299 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 OR6Y1Q8NGX8 325 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 OXNAD1Q96HP4 312 aaPredicted RBP12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 C9orf16Q9BUW7 83 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 TPRKBQ9Y3C4 175 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 STARD13Q9Y3M8 1113 aa12.25□□□□□ -0.45
CSPG4P12-201ENST00000558282 PPP1R3GB7ZBB8 358 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 K7ERI5 159 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 TRIM13O60858 407 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 APRTP07741 180 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 GYG1P46976 350 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 PDK3Q15120 406 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 MFSD14BQ5SR56 506 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 C12orf60Q5U649 245 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 TSPAN14Q8NG11 270 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 FBXO25Q8TCJ0 367 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 PPP1R36Q96LQ0 422 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 PPP1R2P1Q96PQ5 205 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 USP42Q9H9J4 1324 aaKnown RBP12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 ERVV-2B6SEH9 535 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 KCNN4O15554 427 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 SLC4A1P02730 911 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 MMRN1Q13201 1228 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 BFSP2Q13515 415 aa12.24□□□□□ -0.45
CSPG4P12-201ENST00000558282 ZNF846Q147U1 533 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms