RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 E9PBE3 544 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 F5H6K3 240 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 CIB2O75838 187 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 PGM3O95394 542 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 ARFIP2P53365 341 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 CACNB3P54284 484 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 GEMIN4P57678 1058 aaKnown RBP16.46■□□□□ 0.23
SYNE3-203ENST00000554873 RPL26P61254 145 aaKnown RBP16.46■□□□□ 0.23
SYNE3-203ENST00000554873 ZNF720Q7Z2F6 126 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 ADGRG6Q86SQ4 1221 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 TREML1Q86YW5 311 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 PASD1Q8IV76 773 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 BBS5Q8N3I7 341 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 OSBPL8Q9BZF1 889 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 TRPV5Q9NQA5 729 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 TELO2Q9Y4R8 837 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 CCDC160A6NGH7 325 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 SPDYE16A6NNV3 312 aaPredicted RBP16.46■□□□□ 0.23
SYNE3-203ENST00000554873 SMIM18P0DKX4 95 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 KCNJ1P48048 391 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 TCP10Q12799 353 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 DOK7Q18PE1 504 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 MAP7D1Q3KQU3 841 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 PDCD4Q53EL6 469 aaKnown RBP16.46■□□□□ 0.23
SYNE3-203ENST00000554873 RIPOR1Q6ZS17 1223 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 RAPH1Q70E73 1250 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 ZNF75CPQ92670 426 aaPredicted RBP16.46■□□□□ 0.23
SYNE3-203ENST00000554873 KRT35Q92764 455 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 PARVGQ9HBI0 331 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 AGPAT3Q9NRZ7 376 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 DCTN4Q9UJW0 460 aa16.46■□□□□ 0.23
SYNE3-203ENST00000554873 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.46■□□□□ 0.23
SYNE3-203ENST00000554873 LRRN2O75325 713 aa16.46■□□□□ 0.22
SYNE3-203ENST00000554873 GYS1P13807 737 aa16.46■□□□□ 0.22
SYNE3-203ENST00000554873 VCLP18206 1134 aa16.46■□□□□ 0.22
SYNE3-203ENST00000554873 ACADVLP49748 655 aa16.46■□□□□ 0.22
SYNE3-203ENST00000554873 ACTR3P61158 418 aa16.46■□□□□ 0.22
SYNE3-203ENST00000554873 XIAPP98170 497 aa16.46■□□□□ 0.22
SYNE3-203ENST00000554873 PDK3Q15120 406 aa16.46■□□□□ 0.22
SYNE3-203ENST00000554873 TMCO4Q5TGY1 634 aa16.46■□□□□ 0.22
SYNE3-203ENST00000554873 Q6ZNX1 250 aa16.46■□□□□ 0.22
SYNE3-203ENST00000554873 OTOP1Q7RTM1 612 aa16.46■□□□□ 0.22
SYNE3-203ENST00000554873 DEPTORQ8TB45 409 aa16.46■□□□□ 0.22
SYNE3-203ENST00000554873 CCDC110Q8TBZ0 833 aa16.46■□□□□ 0.22
SYNE3-203ENST00000554873 CYTH2Q99418 400 aa16.46■□□□□ 0.22
SYNE3-203ENST00000554873 AGPAT1Q99943 283 aa16.46■□□□□ 0.22
SYNE3-203ENST00000554873 TUBA8Q9NY65 449 aaPredicted RBP16.46■□□□□ 0.22
SYNE3-203ENST00000554873 DMTF1Q9Y222 760 aa16.46■□□□□ 0.22
SYNE3-203ENST00000554873 FRMD4BQ9Y2L6 1034 aa16.46■□□□□ 0.22
SYNE3-203ENST00000554873 DDTLA6NHG4 134 aaPredicted RBP16.45■□□□□ 0.22
SYNE3-203ENST00000554873 MARCKSL1P49006 195 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 IKQ13123 557 aaPredicted RBP16.45■□□□□ 0.22
SYNE3-203ENST00000554873 SPIDRQ14159 915 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 KIF22Q14807 665 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 MAP3K21Q5TCX8 1036 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 HHIPL2Q6UWX4 724 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 CROCCP3Q8IVE0 287 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 RDH13Q8NBN7 331 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 LMO3Q8TAP4 145 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 SLC20A1Q8WUM9 679 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 TEKT1Q969V4 418 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 ZSWIM1Q9BR11 485 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 RBM38Q9H0Z9 239 aaKnown RBP16.45■□□□□ 0.22
SYNE3-203ENST00000554873 DNAJC17Q9NVM6 304 aaKnown RBP16.45■□□□□ 0.22
SYNE3-203ENST00000554873 SMCHD1A6NHR9 2005 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 TAF1LQ8IZX4 1826 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 IGLV3-22A0A075B6J6 115 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 CHMP2AO43633 222 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 USP1O94782 785 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 CYP3A4P08684 503 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 CHRNB2P17787 502 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 HALP42357 657 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 UGT2A3Q6UWM9 527 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 PATL1Q86TB9 770 aaKnown RBP16.45■□□□□ 0.22
SYNE3-203ENST00000554873 TMEM110Q86TL2 294 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 C12orf50Q8NA57 414 aaPredicted RBP16.45■□□□□ 0.22
SYNE3-203ENST00000554873 RFWD2Q8NHY2 731 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 HNRNPABQ99729 332 aaKnown RBP16.45■□□□□ 0.22
SYNE3-203ENST00000554873 ZC3H12CQ9C0D7 883 aaKnown RBP16.45■□□□□ 0.22
SYNE3-203ENST00000554873 TRABDQ9H4I3 376 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 PPM1HQ9ULR3 514 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 SSX2IPQ9Y2D8 614 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 PCDHAC2Q9Y5I4 1007 aa16.45■□□□□ 0.22
SYNE3-203ENST00000554873 ARHGAP10A1A4S6 786 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 P4HA2O15460 535 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 FKBP6O75344 327 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 FTLP02792 175 aaPredicted RBP16.44■□□□□ 0.22
SYNE3-203ENST00000554873 MYL7Q01449 175 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 CAV1Q03135 178 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 ZBTB16Q05516 673 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 VPS72Q15906 364 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 SP8Q8IXZ3 490 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 SLCO2A1Q92959 643 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 SKA1Q96BD8 255 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 SNF8Q96H20 258 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 PANX3Q96QZ0 392 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 ASIC3Q9UHC3 531 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 BCS1LQ9Y276 419 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 CBFA2T3O75081 653 aa16.44■□□□□ 0.22
SYNE3-203ENST00000554873 SERPINB7O75635 380 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms