RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 MAPK8P45983 427 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 PTGDRQ13258 359 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 MFN1Q8IWA4 741 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 PPP2R3CQ969Q6 453 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 MTERF3Q96E29 417 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 KIF12Q96FN5 646 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 MED4Q9NPJ6 270 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 COL6A6A6NMZ7 2263 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 CHD4Q14839 1912 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 IGSF1Q8N6C5 1336 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 ARL5CA6NH57 179 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 PEX14O75381 377 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 BRAFP15056 766 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 TFDP3Q5H9I0 405 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 CCDC149Q6ZUS6 474 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 ADAM32Q8TC27 787 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 NRBF2Q96F24 287 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 CARD14Q9BXL6 1004 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 TRIM39Q9HCM9 518 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 PYCARDQ9ULZ3 195 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 PCDHA12Q9UN75 941 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 KIAA1107Q9UPP5 1409 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 H0Y626 953 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 BTN3A3O00478 584 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 FKBP9O95302 570 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 GGPS1O95749 300 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 RPN1P04843 607 aaKnown RBP3.45□□□□□ -1.86
SYNE2-212ENST00000554584 ENO3P13929 434 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-212ENST00000554584 HOXD10P28358 340 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 POTEEQ6S8J3 1075 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 SCIMPQ6UWF3 145 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 FKBP9P1Q75LS8 142 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 BRINP2Q9C0B6 783 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 INTS10Q9NVR2 710 aaKnown RBP3.45□□□□□ -1.86
SYNE2-212ENST00000554584 NBPF26B4DH59 902 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 HUS1O60921 280 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 GHRP10912 638 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 MTMR3Q13615 1198 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 NBPF12Q5TAG4 269 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-212ENST00000554584 TYW3Q6IPR3 259 aaKnown RBP3.45□□□□□ -1.86
SYNE2-212ENST00000554584 ULK3Q6PHR2 472 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 NLGN4XQ8N0W4 816 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 SNX21Q969T3 373 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 CNDP1Q96KN2 507 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 RNF103-CHMP3A0A140T963 221 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 LBPP18428 481 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 GUCY1A2P33402 732 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 ZSWIM7Q19AV6 140 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 FNDC3BQ53EP0 1204 aaKnown RBP3.45□□□□□ -1.86
SYNE2-212ENST00000554584 DGKKQ5KSL6 1271 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 RAP1GAP2Q684P5 730 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 CRTC3Q6UUV7 619 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 CCDC197Q8NCU1 140 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 NLGN4YQ8NFZ3 816 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-212ENST00000554584 UBP1Q9NZI7 540 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 CXXC1Q9P0U4 656 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-212ENST00000554584 SCINQ9Y6U3 715 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 ERICH3Q5RHP9 1530 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 PCP4L1A6NKN8 68 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 KHNYNO15037 678 aaKnown RBP3.45□□□□□ -1.86
SYNE2-212ENST00000554584 HOXA2O43364 376 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 TNFSF12O43508 249 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 TOP3BO95985 862 aaKnown RBP3.45□□□□□ -1.86
SYNE2-212ENST00000554584 NFKBIAP25963 317 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 PTPN7P35236 360 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 ACAD10Q6JQN1 1059 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 RELL1Q8IUW5 271 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 CLYBLQ8N0X4 340 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 TMLHEQ9NVH6 421 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 HSPA1AP0DMV8 641 aaKnown RBP3.45□□□□□ -1.86
SYNE2-212ENST00000554584 HSPA1BP0DMV9 641 aaKnown RBP3.45□□□□□ -1.86
SYNE2-212ENST00000554584 PPM1AP35813 382 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 MXI1P50539 228 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 KIF11P52732 1056 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 MMS22LQ6ZRQ5 1243 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 FBXO16Q8IX29 292 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-212ENST00000554584 ST13P4Q8IZP2 240 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-212ENST00000554584 WDR60Q8WVS4 1066 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 CYP4F12Q9HCS2 524 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 ANAPC2Q9UJX6 822 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 IPO5O00410 1097 aaKnown RBP3.45□□□□□ -1.86
SYNE2-212ENST00000554584 CDC40O60508 579 aaKnown RBP eCLIP3.45□□□□□ -1.86
SYNE2-212ENST00000554584 CTNND1O60716 968 aaKnown RBP3.45□□□□□ -1.86
SYNE2-212ENST00000554584 ALDH1A1P00352 501 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 SH3BGRP55822 239 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-212ENST00000554584 NFIXQ14938 502 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF667Q5HYK9 610 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 IL17REQ8NFR9 667 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 COQ8AQ8NI60 647 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 EDEM1Q92611 657 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 HIF3AQ9Y2N7 669 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 PCDHB6Q9Y5E3 794 aa3.45□□□□□ -1.86
SYNE2-212ENST00000554584 LRATO95237 230 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 PRKCHP24723 683 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 MGAT1P26572 445 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 KRT20P35900 424 aa3.44□□□□□ -1.86
SYNE2-212ENST00000554584 TRIP4Q15650 581 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 MSL3Q8N5Y2 521 aaKnown RBP3.44□□□□□ -1.86
SYNE2-212ENST00000554584 DDI1Q8WTU0 396 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms