RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 ATL2Q8NHH9 583 aa8.59□□□□□ -1.03
RAB3IP-215ENST00000551641 DEFB118Q96PH6 123 aa8.59□□□□□ -1.03
RAB3IP-215ENST00000551641 RNF208Q9H0X6 261 aa8.59□□□□□ -1.03
RAB3IP-215ENST00000551641 UNC93B1Q9H1C4 597 aa8.59□□□□□ -1.03
RAB3IP-215ENST00000551641 SLC40A1Q9NP59 571 aa8.59□□□□□ -1.03
RAB3IP-215ENST00000551641 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.59□□□□□ -1.03
RAB3IP-215ENST00000551641 CCT8L1PA6NM43 557 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 VNN1O95497 513 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 TTC4O95801 387 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 GAS8O95995 478 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 OAS1P00973 400 aaKnown RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 HMGCRP04035 888 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 GSTA1P08263 222 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 CYBAP13498 195 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 INSRRP14616 1297 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 CHKAP35790 457 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 CCNG2Q16589 344 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 TDRD10Q5VZ19 366 aaKnown RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 PHF13Q86YI8 300 aaPredicted RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 LRRC34Q8IZ02 419 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 ELMO3Q96BJ8 720 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 IFT74Q96LB3 600 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 NLRP4Q96MN2 994 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 PRMT1Q99873 361 aaKnown RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 DDX23Q9BUQ8 820 aaKnown RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 KLC4Q9NSK0 619 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 NRBP2Q9NSY0 501 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 MYH9P35579 1960 aaKnown RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 LRRIQ4A6NIV6 560 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 CALCAP01258 141 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 HLA-DRAP01903 254 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 HARSP12081 509 aaKnown RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 NSFP46459 744 aaKnown RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 SLCO1A2P46721 670 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 WNT7BP56706 349 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 NOMO3P69849 1222 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 XKR3Q5GH77 459 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 PLEKHA7Q6IQ23 1121 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 PPP1R2P3Q6NXS1 205 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 CRELD2Q6UXH1 353 aaPredicted RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 KATNAL2Q8IYT4 538 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 FUKQ8N0W3 1084 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 ANKS4BQ8N8V4 417 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 CPA5Q8WXQ8 436 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 CCDC114Q96M63 670 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 TRAIPQ9BWF2 469 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 POLR3FQ9H1D9 316 aaPredicted RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 SMARCAD1Q9H4L7 1026 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 SPC25Q9HBM1 224 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 ASIC3Q9UHC3 531 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 LGALS13Q9UHV8 139 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 SLC12A4Q9UP95 1085 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 SIP14410 1827 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 LAMA2P24043 3122 aaKnown RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 SMIM23A6NLE4 172 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 VTNP04004 478 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 ATP5DP30049 168 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 GTF2A1P52655 376 aaPredicted RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 ITGA8P53708 1063 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 ATN1P54259 1190 aaPredicted RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 CUL2Q13617 745 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 LONRF1Q17RB8 773 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 TMEM132AQ24JP5 1023 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 WDR44Q5JSH3 913 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 VSTM1Q6UX27 236 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 CDR2LQ86X02 465 aaPredicted RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 RHPN2Q8IUC4 686 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 RHOT1Q8IXI2 618 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 PPTC7Q8NI37 304 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 UHMK1Q8TAS1 419 aaKnown RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 IPO4Q8TEX9 1081 aaKnown RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 SLC7A3Q8WY07 619 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 ATG4AQ8WYN0 398 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 APOBEC3GQ9HC16 384 aaKnown RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 HMX1Q9NP08 348 aaPredicted RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 ERAP1Q9NZ08 941 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 GNEQ9Y223 722 aaKnown RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 AKT3Q9Y243 479 aa8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 R3HDM2Q9Y2K5 976 aaKnown RBP8.58□□□□□ -1.04
RAB3IP-215ENST00000551641 WDR81Q562E7 1941 aa8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 PTPRJQ12913 1337 aa8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 SEPT4O43236 478 aa8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 ATG7O95352 703 aa8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 ATF2P15336 505 aa8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 LIG4P49917 911 aa8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 NLRP11P59045 1033 aaKnown RBP8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 MAMLD1Q13495 774 aa8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 SNX1Q13596 522 aa8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 EMC2Q15006 297 aa8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 ARHGEF6Q15052 776 aa8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 KCNA10Q16322 511 aa8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 LIN9Q5TKA1 542 aa8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 CCDC25Q86WR0 208 aa8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 BBOF1Q8ND07 529 aa8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 EXD1Q8NHP7 514 aa8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 ARHGEF2Q92974 986 aaKnown RBP8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 FAM212AQ96EL1 285 aa8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 BICD1Q96G01 975 aa8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 SGSM3Q96HU1 749 aa8.57□□□□□ -1.04
RAB3IP-215ENST00000551641 HAPLN2Q9GZV7 340 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms