RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 KIF13BQ9NQT8 1826 aa14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 FAM237BA0A1B0GVD1 139 aa14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 CCDC189A1A4V9 331 aa14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 GGPS1O95749 300 aa14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 MAPTP10636 758 aaKnown RBP14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 IL1R2P27930 398 aa14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 PTDSS1P48651 473 aaKnown RBP14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 CTCFP49711 727 aaPredicted RBP14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 NCKAP1LP55160 1127 aa14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 RNF220Q5VTB9 566 aa14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 MAP4K3Q8IVH8 894 aa14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 SPNS2Q8IVW8 549 aa14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 UNC45BQ8IWX7 931 aa14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 CCDC89Q8N998 374 aa14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 C12orf50Q8NA57 414 aaPredicted RBP14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 PHC3Q8NDX5 983 aa14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 ACTL9Q8TC94 416 aa14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 WDR60Q8WVS4 1066 aa14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 TFAP2BQ92481 460 aa14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 IFT74Q96LB3 600 aa14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 CCDC77Q9BR77 488 aa14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 ASCC2Q9H1I8 757 aaPredicted RBP14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 POLIQ9UNA4 740 aa14.65□□□□□ -0.06
LPCAT3-203ENST00000535479 FOCADQ5VW36 1801 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 CLUHO75153 1309 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 MEI4A8MW99 385 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 MYL6P60660 151 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 TFAMQ00059 246 aaKnown RBP14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 OTUD4Q01804 1114 aaKnown RBP14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 SP2Q02086 613 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 NR1H3Q13133 447 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 PEX6Q13608 980 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 TRIM50Q86XT4 487 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 KIAA0319LQ8IZA0 1049 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 NAF1Q96HR8 494 aaKnown RBP14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 SLITRK1Q96PX8 696 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 TMEM109Q9BVC6 243 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 PLVAPQ9BX97 442 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 AGO2Q9UKV8 859 aaKnown RBP14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 CST8O60676 142 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 USP1O94782 785 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 SORBS2O94875 1100 aaKnown RBP14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 TMEM63AO94886 807 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 CCND1P24385 295 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 RFC1P35251 1148 aaPredicted RBP14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 GPAT2Q6NUI2 795 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 THNSL1Q8IYQ7 743 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 ANKRD35Q8N283 1001 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 ZNF606Q8WXB4 792 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 ACAP3Q96P50 834 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 PDCD2LQ9BRP1 358 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 MSTO1Q9BUK6 570 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 PCDHB2Q9Y5E7 798 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 MRPL42Q9Y6G3 142 aaKnown RBP14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 CNTNAP1P78357 1384 aa14.64□□□□□ -0.07
LPCAT3-203ENST00000535479 LINGO3P0C6S8 592 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 RFC5P40937 340 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 KDSRQ06136 332 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 CUL2Q13617 745 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 RCN1Q15293 331 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 CCDC6Q16204 474 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 NFIL3Q16649 462 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 C1orf228Q6PIY5 440 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 LRRC71Q8N4P6 559 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 OGFOD1Q8N543 542 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 PYROXD1Q8WU10 500 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 P3H4Q92791 437 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 PAFAH2Q99487 392 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 QTRT2Q9H974 415 aaKnown RBP14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 EHMT1Q9H9B1 1298 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 WDR64B1ANS9 1081 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 RGS20O76081 388 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 ICAM1P05362 532 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 UBTFL6P0CB48 400 aaPredicted RBP14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 YWHAGP61981 247 aaKnown RBP eCLIP14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 CRYMQ14894 314 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 SLC27A3Q5K4L6 730 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 CRELD2Q6UXH1 353 aaPredicted RBP14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 RINLQ6ZS11 566 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 PRPF39Q86UA1 669 aaKnown RBP14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 SPDYE1Q8NFV5 336 aaPredicted RBP14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 SERAC1Q96JX3 654 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 MMP19Q99542 508 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 SYT15Q9BQS2 421 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 R3HDMLQ9H3Y0 253 aa14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 RPAP3Q9H6T3 665 aaPredicted RBP14.63□□□□□ -0.07
LPCAT3-203ENST00000535479 KLRG2A4D1S0 409 aaPredicted RBP14.62□□□□□ -0.07
LPCAT3-203ENST00000535479 DNALI1O14645 258 aaPredicted RBP14.62□□□□□ -0.07
LPCAT3-203ENST00000535479 MTA2O94776 668 aa14.62□□□□□ -0.07
LPCAT3-203ENST00000535479 ACO1P21399 889 aaKnown RBP14.62□□□□□ -0.07
LPCAT3-203ENST00000535479 LIN9Q5TKA1 542 aa14.62□□□□□ -0.07
LPCAT3-203ENST00000535479 ANO7Q6IWH7 933 aa14.62□□□□□ -0.07
LPCAT3-203ENST00000535479 DNAJC24Q6P3W2 148 aa14.62□□□□□ -0.07
LPCAT3-203ENST00000535479 CDHR3Q6ZTQ4 885 aa14.62□□□□□ -0.07
LPCAT3-203ENST00000535479 HACE1Q8IYU2 909 aa14.62□□□□□ -0.07
LPCAT3-203ENST00000535479 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.62□□□□□ -0.07
LPCAT3-203ENST00000535479 GRK7Q8WTQ7 553 aa14.62□□□□□ -0.07
LPCAT3-203ENST00000535479 TRAPPC12Q8WVT3 735 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms