RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 MARCKSP29966 332 aaPredicted RBP3.84□□□□□ -1.79
PTPRC-213ENST00000529828 NMT1P30419 496 aaKnown RBP3.84□□□□□ -1.79
PTPRC-213ENST00000529828 MCM7P33993 719 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 MAPK8P45983 427 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 ALDH1A3P47895 512 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 DGKEP52429 567 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 EPHB3P54753 998 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 YWHAHQ04917 246 aaPredicted RBP3.84□□□□□ -1.79
PTPRC-213ENST00000529828 GRSF1Q12849 480 aaKnown RBP eCLIP3.84□□□□□ -1.79
PTPRC-213ENST00000529828 PSMD2Q13200 908 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 ELF2Q15723 593 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 ECM1Q16610 540 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 ITPRIPL2Q3MIP1 535 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 ARHGAP29Q52LW3 1261 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 DAB2IPQ5VWQ8 1189 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 LRSAM1Q6UWE0 723 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 ALKAL1Q6UXT8 129 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 ARMCX6Q7L4S7 300 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 TAS1R3Q7RTX0 852 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 FBXL16Q8N461 479 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 LEMD2Q8NC56 503 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 APPL2Q8NEU8 664 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 RPLP0P6Q8NHW5 317 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 RIN3Q8TB24 985 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 BPIFB1Q8TDL5 484 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 GIPC2Q8TF65 315 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 TNFRSF25Q93038 417 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 E2F7Q96AV8 911 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 SUSD3Q96L08 255 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 IFT74Q96LB3 600 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 ACO2Q99798 780 aaKnown RBP3.84□□□□□ -1.79
PTPRC-213ENST00000529828 TCHPQ9BT92 498 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 TARS2Q9BW92 718 aaKnown RBP3.84□□□□□ -1.79
PTPRC-213ENST00000529828 HPS4Q9NQG7 708 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 FSCN3Q9NQT6 498 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 TOPORSQ9NS56 1045 aaPredicted RBP3.84□□□□□ -1.79
PTPRC-213ENST00000529828 GKN1Q9NS71 199 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 ORC3Q9UBD5 711 aaPredicted RBP3.84□□□□□ -1.79
PTPRC-213ENST00000529828 PCDHGA5Q9Y5G8 931 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 CYP46A1Q9Y6A2 500 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 BCLAF3A2AJT9 711 aaKnown RBP3.84□□□□□ -1.79
PTPRC-213ENST00000529828 SOBPA7XYQ1 873 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 BTBD18B2RXH4 712 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 K7ERI5 159 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 CDKL5O76039 1030 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 LARGE1O95461 756 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 CTDNEP1O95476 244 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 CXCL8P10145 99 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 XBP1P17861 261 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 CYP11B2P19099 503 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 HOXA6P31267 233 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 MCM2P49736 904 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 SEC13P55735 322 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 PEX3P56589 373 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 GUCY1B3Q02153 619 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 PPP2R5AQ15172 486 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 ARHGAP15Q53QZ3 475 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 XKR4Q5GH76 650 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 TMEM196Q5HYL7 178 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 CENPPQ6IPU0 288 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 C1orf228Q6PIY5 440 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 DSTYKQ6XUX3 929 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 DNAJB7Q7Z6W7 309 aaPredicted RBP3.84□□□□□ -1.79
PTPRC-213ENST00000529828 DIS3L2Q8IYB7 885 aaKnown RBP3.84□□□□□ -1.79
PTPRC-213ENST00000529828 SYNPOQ8N3V7 929 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 NECAB1Q8N987 351 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 ZNF274Q96GC6 653 aaPredicted RBP3.84□□□□□ -1.79
PTPRC-213ENST00000529828 ACAP3Q96P50 834 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 MTMR9Q96QG7 549 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 NACC1Q96RE7 527 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 MRPL4Q9BYD3 311 aaKnown RBP3.84□□□□□ -1.79
PTPRC-213ENST00000529828 GPR88Q9GZN0 384 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 BHMT2Q9H2M3 363 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 TMEM9BQ9NQ34 198 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 PDRG1Q9NUG6 133 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 SLC38A7Q9NVC3 462 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 CNTN3Q9P232 1028 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 TNFSF13BQ9Y275 285 aa3.84□□□□□ -1.79
PTPRC-213ENST00000529828 TRIP11Q15643 1979 aa3.84□□□□□ -1.8
PTPRC-213ENST00000529828 PHLPP2Q6ZVD8 1323 aa3.84□□□□□ -1.8
PTPRC-213ENST00000529828 STK36Q9NRP7 1315 aa3.84□□□□□ -1.8
PTPRC-213ENST00000529828 KIF26AQ9ULI4 1882 aaPredicted RBP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 CFAP46Q8IYW2 2715 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 SFI1A8K8P3 1242 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 CDX4O14627 284 aaPredicted RBP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 ABLIM1O14639 778 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 KHNYNO15037 678 aaKnown RBP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 SLC16A4O15374 487 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 JAK2O60674 1132 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 RHOBTB1O94844 696 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 APBB3O95704 486 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 FDPSP14324 419 aaKnown RBP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 KCNE1P15382 129 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 ATF6P18850 670 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 RPL9P32969 192 aaKnown RBP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 MATR3P43243 847 aaKnown RBP eCLIP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 NPTX2P47972 431 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 DHPSP49366 369 aaPredicted RBP3.83□□□□□ -1.8
PTPRC-213ENST00000529828 GPR15P49685 360 aa3.83□□□□□ -1.8
PTPRC-213ENST00000529828 GALK1P51570 392 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms