RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 ADHFE1Q8IWW8 467 aa27.79■■■□□ 2.04
DDR1-279ENST00000515529 ELMOD1Q8N336 334 aa27.79■■■□□ 2.04
DDR1-279ENST00000515529 C2orf15Q8WU43 125 aaKnown RBP27.79■■■□□ 2.04
DDR1-279ENST00000515529 SLC35C1Q96A29 364 aa27.79■■■□□ 2.04
DDR1-279ENST00000515529 ZNF707Q96C28 371 aaPredicted RBP27.79■■■□□ 2.04
DDR1-279ENST00000515529 RHOBTB2Q9BYZ6 727 aa27.79■■■□□ 2.04
DDR1-279ENST00000515529 XIRP2A4UGR9 3374 aa27.78■■■□□ 2.04
DDR1-279ENST00000515529 MTMR11A4FU01 709 aa27.78■■■□□ 2.04
DDR1-279ENST00000515529 GABRDO14764 452 aa27.78■■■□□ 2.04
DDR1-279ENST00000515529 N4BP1O75113 896 aaKnown RBP27.78■■■□□ 2.04
DDR1-279ENST00000515529 NOP14P78316 857 aaKnown RBP27.78■■■□□ 2.04
DDR1-279ENST00000515529 NFE2Q16621 373 aaPredicted RBP27.78■■■□□ 2.04
DDR1-279ENST00000515529 WDR44Q5JSH3 913 aa27.78■■■□□ 2.04
DDR1-279ENST00000515529 INTS6LQ5JSJ4 861 aaKnown RBP27.78■■■□□ 2.04
DDR1-279ENST00000515529 CAVIN1Q6NZI2 390 aaKnown RBP27.78■■■□□ 2.04
DDR1-279ENST00000515529 KBTBD7Q8WVZ9 684 aa27.78■■■□□ 2.04
DDR1-279ENST00000515529 SYT15Q9BQS2 421 aa27.78■■■□□ 2.04
DDR1-279ENST00000515529 MRPL45Q9BRJ2 306 aaKnown RBP27.78■■■□□ 2.04
DDR1-279ENST00000515529 PI4K2AQ9BTU6 479 aa27.78■■■□□ 2.04
DDR1-279ENST00000515529 POMKQ9H5K3 350 aa27.78■■■□□ 2.04
DDR1-279ENST00000515529 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.78■■■□□ 2.04
DDR1-279ENST00000515529 ANO10Q9NW15 660 aa27.78■■■□□ 2.04
DDR1-279ENST00000515529 CDH9Q9ULB4 789 aa27.78■■■□□ 2.04
DDR1-279ENST00000515529 TCF20Q9UGU0 1960 aaKnown RBP27.78■■■□□ 2.04
DDR1-279ENST00000515529 PDGFRBP09619 1106 aa27.77■■■□□ 2.04
DDR1-279ENST00000515529 SSTR3P32745 418 aaPredicted RBP27.77■■■□□ 2.04
DDR1-279ENST00000515529 CETN1Q12798 172 aa27.77■■■□□ 2.04
DDR1-279ENST00000515529 DUSP4Q13115 394 aa27.77■■■□□ 2.04
DDR1-279ENST00000515529 PLD1Q13393 1074 aa27.77■■■□□ 2.04
DDR1-279ENST00000515529 STX1AQ16623 288 aa27.77■■■□□ 2.04
DDR1-279ENST00000515529 ATAD1Q8NBU5 361 aa27.77■■■□□ 2.04
DDR1-279ENST00000515529 SPPL2BQ8TCT7 592 aa27.77■■■□□ 2.04
DDR1-279ENST00000515529 ELMO3Q96BJ8 720 aa27.77■■■□□ 2.04
DDR1-279ENST00000515529 SMYD3Q9H7B4 428 aa27.77■■■□□ 2.04
DDR1-279ENST00000515529 RAB20Q9NX57 234 aa27.77■■■□□ 2.04
DDR1-279ENST00000515529 ABI2Q9NYB9 513 aaPredicted RBP27.77■■■□□ 2.04
DDR1-279ENST00000515529 TMEM63CQ9P1W3 806 aa27.77■■■□□ 2.04
DDR1-279ENST00000515529 NR2E1Q9Y466 385 aa27.77■■■□□ 2.04
DDR1-279ENST00000515529 PCDHB5Q9Y5E4 795 aa27.77■■■□□ 2.04
DDR1-279ENST00000515529 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.77■■■□□ 2.04
DDR1-279ENST00000515529 SPTBN5Q9NRC6 3674 aaKnown RBP27.77■■■□□ 2.04
DDR1-279ENST00000515529 UNC80Q8N2C7 3258 aa27.76■■■□□ 2.03
DDR1-279ENST00000515529 POU2F2P09086 479 aa27.76■■■□□ 2.03
DDR1-279ENST00000515529 ALDH1A3P47895 512 aa27.76■■■□□ 2.03
DDR1-279ENST00000515529 CBWD6Q4V339 395 aa27.76■■■□□ 2.03
DDR1-279ENST00000515529 CBWD3Q5JTY5 395 aa27.76■■■□□ 2.03
DDR1-279ENST00000515529 CBWD5Q5RIA9 395 aa27.76■■■□□ 2.03
DDR1-279ENST00000515529 SPOPLQ6IQ16 392 aa27.76■■■□□ 2.03
DDR1-279ENST00000515529 FAM114A1Q8IWE2 563 aa27.76■■■□□ 2.03
DDR1-279ENST00000515529 RPGRIP1Q96KN7 1286 aa27.76■■■□□ 2.03
DDR1-279ENST00000515529 CNOT6LQ96LI5 555 aaKnown RBP27.76■■■□□ 2.03
DDR1-279ENST00000515529 HSFX1Q9UBD0 423 aa27.76■■■□□ 2.03
DDR1-279ENST00000515529 MAGEC2Q9UBF1 373 aaPredicted RBP27.76■■■□□ 2.03
DDR1-279ENST00000515529 YIPF1Q9Y548 306 aa27.76■■■□□ 2.03
DDR1-279ENST00000515529 CLUHO75153 1309 aa27.75■■■□□ 2.03
DDR1-279ENST00000515529 A8MXQ7 604 aa27.75■■■□□ 2.03
DDR1-279ENST00000515529 PAPLNO95428 1278 aa27.75■■■□□ 2.03
DDR1-279ENST00000515529 FMO5P49326 533 aa27.75■■■□□ 2.03
DDR1-279ENST00000515529 TUFMP49411 452 aaKnown RBP27.75■■■□□ 2.03
DDR1-279ENST00000515529 MARSP56192 900 aaKnown RBP27.75■■■□□ 2.03
DDR1-279ENST00000515529 ZP2Q05996 745 aa27.75■■■□□ 2.03
DDR1-279ENST00000515529 TWF1Q12792 350 aa27.75■■■□□ 2.03
DDR1-279ENST00000515529 MAPRE1Q15691 268 aaKnown RBP27.75■■■□□ 2.03
DDR1-279ENST00000515529 MGAT5BQ3V5L5 792 aa27.75■■■□□ 2.03
DDR1-279ENST00000515529 LRRTM3Q86VH5 581 aa27.75■■■□□ 2.03
DDR1-279ENST00000515529 NECAB3Q96P71 396 aaPredicted RBP27.75■■■□□ 2.03
DDR1-279ENST00000515529 SEPT5Q99719 369 aaPredicted RBP27.75■■■□□ 2.03
DDR1-279ENST00000515529 NIF3L1Q9GZT8 377 aa27.75■■■□□ 2.03
DDR1-279ENST00000515529 WDR6Q9NNW5 1121 aaKnown RBP27.75■■■□□ 2.03
DDR1-279ENST00000515529 SLC27A5Q9Y2P5 690 aa27.75■■■□□ 2.03
DDR1-279ENST00000515529 TRIM21P19474 475 aaKnown RBP27.74■■■□□ 2.03
DDR1-279ENST00000515529 LMO2P25791 158 aa27.74■■■□□ 2.03
DDR1-279ENST00000515529 RAP1GAPP47736 663 aa27.74■■■□□ 2.03
DDR1-279ENST00000515529 CDR1P51861 262 aa27.74■■■□□ 2.03
DDR1-279ENST00000515529 EPHB3P54753 998 aa27.74■■■□□ 2.03
DDR1-279ENST00000515529 PSMC1P62191 440 aaKnown RBP27.74■■■□□ 2.03
DDR1-279ENST00000515529 KLHL40Q2TBA0 621 aa27.74■■■□□ 2.03
DDR1-279ENST00000515529 IQCEQ6IPM2 695 aa27.74■■■□□ 2.03
DDR1-279ENST00000515529 C4orf50Q6ZRC1 276 aa27.74■■■□□ 2.03
DDR1-279ENST00000515529 GRASPQ7Z6J2 395 aaPredicted RBP27.74■■■□□ 2.03
DDR1-279ENST00000515529 SPATA2LQ8IUW3 424 aaPredicted RBP27.74■■■□□ 2.03
DDR1-279ENST00000515529 TRIM59Q8IWR1 403 aa27.74■■■□□ 2.03
DDR1-279ENST00000515529 FEZF2Q8TBJ5 459 aa27.74■■■□□ 2.03
DDR1-279ENST00000515529 ZNF512Q96ME7 567 aaPredicted RBP27.74■■■□□ 2.03
DDR1-279ENST00000515529 THAP9Q9H5L6 903 aa27.74■■■□□ 2.03
DDR1-279ENST00000515529 GTF3C4Q9UKN8 822 aa27.74■■■□□ 2.03
DDR1-279ENST00000515529 HCRTO43612 131 aa27.73■■■□□ 2.03
DDR1-279ENST00000515529 VNN2O95498 520 aa27.73■■■□□ 2.03
DDR1-279ENST00000515529 SP100P23497 879 aaPredicted RBP27.73■■■□□ 2.03
DDR1-279ENST00000515529 MTIF2P46199 727 aaKnown RBP27.73■■■□□ 2.03
DDR1-279ENST00000515529 CDH8P55286 799 aa27.73■■■□□ 2.03
DDR1-279ENST00000515529 FAM200AQ8TCP9 573 aa27.73■■■□□ 2.03
DDR1-279ENST00000515529 SEMA4DQ92854 862 aa27.73■■■□□ 2.03
DDR1-279ENST00000515529 MED15Q96RN5 788 aa27.73■■■□□ 2.03
DDR1-279ENST00000515529 DNAI2Q9GZS0 605 aa27.73■■■□□ 2.03
DDR1-279ENST00000515529 CYP3A43Q9HB55 503 aa27.73■■■□□ 2.03
DDR1-279ENST00000515529 AFPP02771 609 aaKnown RBP27.72■■■□□ 2.03
DDR1-279ENST00000515529 PTPN2P17706 415 aa27.72■■■□□ 2.03
DDR1-279ENST00000515529 KCNH2Q12809 1159 aa27.72■■■□□ 2.03
DDR1-279ENST00000515529 OTOP3Q7RTS5 596 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms