RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 TMOD4Q9NZQ9 345 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 SEL1LQ9UBV2 794 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 ABCF2Q9UG63 623 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 PCDHGB4Q9UN71 923 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 CNPY2Q9Y2B0 182 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 ZNF711Q9Y462 761 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 PCDHB1Q9Y5F3 818 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 B3GALT1Q9Y5Z6 326 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 PXDNQ92626 1479 aa4.8□□□□□ -1.64
HMGB1P21-201ENST00000502313 LRP6O75581 1613 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 MED1Q15648 1581 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 PRR19A6NJB7 356 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 CLGNO14967 610 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 PIP5K1BO14986 540 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 HTATSF1O43719 755 aaKnown RBP4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 BUB1BO60566 1050 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 GJB3O75712 270 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 TGDSO95455 350 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 ITGB2P05107 769 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 CD8BP10966 210 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 MYL4P12829 197 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 ATP6V1B1P15313 513 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 NPR1P16066 1061 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 PORP16435 677 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 PTPN1P18031 435 aaKnown RBP4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 HPDP32754 393 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 FNTBP49356 437 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 SEC24CP53992 1094 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 TMEM62Q0P6H9 643 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 CUL4BQ13620 913 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 SLC12A1Q13621 1099 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 SCARB2Q14108 478 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 PLS1Q14651 629 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 PTPN14Q15678 1187 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 MSMPQ1L6U9 139 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 RSPO4Q2I0M5 234 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 ADCK5Q3MIX3 580 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 EMC4Q5J8M3 183 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 CCDC158Q5M9N0 1113 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 ZNF362Q5T0B9 420 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 GJC2Q5T442 439 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 TANGO2Q6ICL3 276 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 SLC23A3Q6PIS1 610 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 CPLX2Q6PUV4 134 aaKnown RBP4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 PHYKPLQ8IUZ5 450 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 LILRA2Q8N149 483 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 GOT1L1Q8NHS2 421 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 FAM71BQ8TC56 605 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 KCNG4Q8TDN1 519 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 OTUD7AQ8TE49 926 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 ADAMTS15Q8TE58 950 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 SH3RF2Q8TEC5 729 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 STON2Q8WXE9 905 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 DLG3Q92796 817 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 CENPTQ96BT3 561 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 SLC35A4Q96G79 324 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 COG8Q96MW5 612 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 PTPN18Q99952 460 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 G6PC3Q9BUM1 346 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 MXD3Q9BW11 206 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 POFUT1Q9H488 388 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 ZWILCHQ9H900 591 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 SACM1LQ9NTJ5 587 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 COL20A1Q9P218 1284 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 RPS6KA6Q9UK32 745 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 TMPRSS11EQ9UL52 423 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 PCDHA3Q9Y5H8 950 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 KIAA1210Q9ULL0 1709 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 USP32Q8NFA0 1604 aa4.79□□□□□ -1.64
HMGB1P21-201ENST00000502313 hCG_1807616A0A1W2PRN6 198 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 UBA6A0AVT1 1052 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 HMX3A6NHT5 357 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 ISM1B1AKI9 464 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 PODXLO00592 558 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 HNRNPDLO14979 420 aaKnown RBP4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 SPTLC2O15270 562 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 FAM155BO75949 473 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 SGPL1O95470 568 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 NDST3O95803 873 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 BAG2O95816 211 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 A1BGP04217 495 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 RXRAP19793 462 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 PDE6CP51160 858 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 PRKAA2P54646 552 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 HSD17B7P56937 341 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 ARF3P61204 181 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 ARF1P84077 181 aaKnown RBP4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 UBE3AQ05086 875 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 NOGQ13253 232 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 ADAM9Q13443 819 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 RASA2Q15283 850 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 EPHA7Q15375 998 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 RAB30Q15771 203 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 ARHGAP15Q53QZ3 475 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 HABP4Q5JVS0 413 aaKnown RBP4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 RRAGBQ5VZM2 374 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 KAZNQ674X7 775 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 TMEM132EQ6IEE7 984 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 SLC22A25Q6T423 547 aa4.78□□□□□ -1.64
HMGB1P21-201ENST00000502313 LYSMD2Q8IV50 215 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms