RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 NUDCD3Q8IVD9 361 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 ANKRD13AQ8IZ07 590 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 SLC22A8Q8TCC7 542 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 SSH3Q8TE77 659 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 PSPC1Q8WXF1 523 aaKnown RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 DCPSQ96C86 337 aaKnown RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 FBXL18Q96ME1 805 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 UROC1Q96N76 676 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 RIOK1Q9BRS2 568 aaKnown RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 CDH19Q9H159 772 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 ALDH8A1Q9H2A2 487 aaPredicted RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 TMEM60Q9H2L4 133 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 CNNM2Q9H8M5 875 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 SP140LQ9H930 580 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 SCPEP1Q9HB40 452 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 MRPL40Q9NQ50 206 aaKnown RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 SLC35C2Q9NQQ7 365 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 LRRC4BQ9NT99 713 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 USP40Q9NVE5 1235 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 SLAIN2Q9P270 581 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 RGS17Q9UGC6 210 aaPredicted RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 FETUBQ9UGM5 382 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 EBF1Q9UH73 591 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 RIMKLBQ9ULI2 386 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 CFL2Q9Y281 166 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 SIK3Q9Y2K2 1263 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 ST14Q9Y5Y6 855 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.24□□□□□ -1.73
ATG3-207ENST00000494571 GJA3Q9Y6H8 435 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 SALL1Q9NSC2 1324 aa4.24□□□□□ -1.73
ATG3-207ENST00000494571 XRN1Q8IZH2 1706 aaKnown RBP4.23□□□□□ -1.73
ATG3-207ENST00000494571 NWD2Q9ULI1 1742 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 MYH8P13535 1937 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 PIK3C2BO00750 1634 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 A0A087X0B3 334 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 TYW5A2RUC4 315 aaKnown RBP4.23□□□□□ -1.73
ATG3-207ENST00000494571 GRID2IPA4D2P6 1211 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 LRRC53A6NM62 1247 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 B2RBV5 119 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 CFAP99D6REC4 459 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 POC1B-GALNT4F8VUJ3 575 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 GIPC1O14908 333 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 SEMA3EO15041 775 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 EPHB6O15197 1021 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 CLOCKO15516 846 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 SCO1O75880 301 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 BAIAP3O94812 1187 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 EPN2O95208 641 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 PARNO95453 639 aaKnown RBP4.23□□□□□ -1.73
ATG3-207ENST00000494571 PAHP00439 452 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 ENO1P06733 434 aaKnown RBP4.23□□□□□ -1.73
ATG3-207ENST00000494571 THRAP10827 490 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 MX2P20592 715 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 CXCR2P25025 360 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 PTPN9P43378 593 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 YARSP54577 528 aaKnown RBP4.23□□□□□ -1.73
ATG3-207ENST00000494571 P2RX3P56373 397 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 NUP107P57740 925 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 COPZ1P61923 177 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 IL9RQ01113 521 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 IFITM2Q01629 132 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 TFAP4Q01664 338 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 BNIP3Q12983 259 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 STRN3Q13033 797 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 DNASE1L3Q13609 305 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 LLGL1Q15334 1064 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 TLR1Q15399 786 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 MAPK11Q15759 364 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 MAPK6Q16659 721 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 KLHL38Q2WGJ6 581 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 FAM214AQ32MH5 1076 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 SGO2Q562F6 1265 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 SLC45A4Q5BKX6 768 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 LVRNQ6Q4G3 990 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 CYP20A1Q6UW02 462 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 ARHGEF18Q6ZSZ5 1173 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 NLRX1Q86UT6 975 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 MICU3Q86XE3 530 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 CATSPER3Q86XQ3 398 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 PASD1Q8IV76 773 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 SPARTQ8N0X7 666 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 CADM3Q8N126 398 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 CRACR2BQ8N4Y2 399 aaPredicted RBP4.23□□□□□ -1.73
ATG3-207ENST00000494571 GSTCDQ8NEC7 633 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 SHKBP1Q8TBC3 707 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 PDCD6IPQ8WUM4 868 aaKnown RBP4.23□□□□□ -1.73
ATG3-207ENST00000494571 SNX19Q92543 992 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 KRT35Q92764 455 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 MTBPQ96DY7 904 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 FEM1CQ96JP0 617 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 ZFYVE19Q96K21 471 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 ZFRQ96KR1 1074 aaKnown RBP4.23□□□□□ -1.73
ATG3-207ENST00000494571 MAP3K14Q99558 947 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 AIFM2Q9BRQ8 373 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 TUBGCP2Q9BSJ2 902 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 NOC4LQ9BVI4 516 aaKnown RBP4.23□□□□□ -1.73
ATG3-207ENST00000494571 PACSIN1Q9BY11 444 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 RBM38Q9H0Z9 239 aaKnown RBP4.23□□□□□ -1.73
ATG3-207ENST00000494571 EPB41L4BQ9H329 900 aa4.23□□□□□ -1.73
ATG3-207ENST00000494571 RUBCNLQ9H714 662 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms