RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 AEBP2Q6ZN18 517 aaPredicted RBP10.36□□□□□ -0.75
ATG3-207ENST00000494571 CHIC1Q5VXU3 224 aa9.97□□□□□ -0.81
ATG3-207ENST00000494571 POTEDQ86YR6 584 aa9.82□□□□□ -0.84
ATG3-207ENST00000494571 SENP3Q9H4L4 574 aaPredicted RBP9.28□□□□□ -0.92
ATG3-207ENST00000494571 PHF23Q9BUL5 403 aaPredicted RBP8.86□□□□□ -0.99
ATG3-207ENST00000494571 MSH5O43196 834 aa8.65□□□□□ -1.03
ATG3-207ENST00000494571 FOXD1Q16676 465 aa8.56□□□□□ -1.04
ATG3-207ENST00000494571 CACNB1Q02641 598 aaPredicted RBP7.82□□□□□ -1.16
ATG3-207ENST00000494571 PIAS4Q8N2W9 510 aaPredicted RBP7.76□□□□□ -1.17
ATG3-207ENST00000494571 POTEHQ6S545 545 aa7.53□□□□□ -1.2
ATG3-207ENST00000494571 DMRT2Q9Y5R5 561 aa7.19□□□□□ -1.26
ATG3-207ENST00000494571 PELP1Q8IZL8 1130 aaKnown RBP7.18□□□□□ -1.26
ATG3-207ENST00000494571 RNF39Q9H2S5 420 aa7.15□□□□□ -1.26
ATG3-207ENST00000494571 PPP6R1Q9UPN7 881 aa7.13□□□□□ -1.27
ATG3-207ENST00000494571 C1QBPQ07021 282 aaKnown RBP7.12□□□□□ -1.27
ATG3-207ENST00000494571 ADRA2BP18089 450 aa7.06□□□□□ -1.28
ATG3-207ENST00000494571 MYT1Q01538 1121 aa7□□□□□ -1.29
ATG3-207ENST00000494571 PLPPR3Q6T4P5 718 aa6.92□□□□□ -1.3
ATG3-207ENST00000494571 SCAF1Q9H7N4 1312 aaKnown RBP6.87□□□□□ -1.31
ATG3-207ENST00000494571 NISCHQ9Y2I1 1504 aa6.86□□□□□ -1.31
ATG3-207ENST00000494571 DNAJC5BQ9UF47 199 aa6.84□□□□□ -1.31
ATG3-207ENST00000494571 HRCP23327 699 aa6.83□□□□□ -1.32
ATG3-207ENST00000494571 PPARGC1BQ86YN6 1023 aaKnown RBP6.83□□□□□ -1.32
ATG3-207ENST00000494571 PRKCSHP14314 528 aaPredicted RBP6.73□□□□□ -1.33
ATG3-207ENST00000494571 MAPK8IP2Q13387 824 aaPredicted RBP6.73□□□□□ -1.33
ATG3-207ENST00000494571 DCAF8L1A6NGE4 600 aa6.67□□□□□ -1.34
ATG3-207ENST00000494571 SP7Q8TDD2 431 aaPredicted RBP6.66□□□□□ -1.34
ATG3-207ENST00000494571 CCDC180Q9P1Z9 1646 aa6.65□□□□□ -1.34
ATG3-207ENST00000494571 BCL11AQ9H165 835 aa6.65□□□□□ -1.35
ATG3-207ENST00000494571 TTBK1Q5TCY1 1321 aaPredicted RBP6.64□□□□□ -1.35
ATG3-207ENST00000494571 PCGF6Q9BYE7 350 aa6.62□□□□□ -1.35
ATG3-207ENST00000494571 HOXD11P31277 338 aaPredicted RBP6.58□□□□□ -1.36
ATG3-207ENST00000494571 FAM9AQ8IZU1 332 aaPredicted RBP6.58□□□□□ -1.36
ATG3-207ENST00000494571 ERICH6Q7L0X2 663 aa6.48□□□□□ -1.37
ATG3-207ENST00000494571 PLSCR2Q9NRY7 297 aa6.48□□□□□ -1.37
ATG3-207ENST00000494571 GTF3C3Q9Y5Q9 886 aa6.47□□□□□ -1.37
ATG3-207ENST00000494571 CENPBP07199 599 aaPredicted RBP6.46□□□□□ -1.38
ATG3-207ENST00000494571 SHROOM4Q9ULL8 1493 aa6.45□□□□□ -1.38
ATG3-207ENST00000494571 NEUROD1Q13562 356 aa6.44□□□□□ -1.38
ATG3-207ENST00000494571 ACIN1Q9UKV3 1341 aaKnown RBP6.43□□□□□ -1.38
ATG3-207ENST00000494571 APLP2Q06481 763 aa6.39□□□□□ -1.39
ATG3-207ENST00000494571 MYO15BQ96JP2 1530 aa6.35□□□□□ -1.39
ATG3-207ENST00000494571 DSG3P32926 999 aa6.33□□□□□ -1.4
ATG3-207ENST00000494571 CSRNP3Q8WYN3 585 aa6.31□□□□□ -1.4
ATG3-207ENST00000494571 CHRDL2Q6WN34 429 aa6.3□□□□□ -1.4
ATG3-207ENST00000494571 ANP32EQ9BTT0 268 aa6.3□□□□□ -1.4
ATG3-207ENST00000494571 RNF216Q9NWF9 866 aaPredicted RBP6.28□□□□□ -1.4
ATG3-207ENST00000494571 SLC24A1O60721 1099 aa6.28□□□□□ -1.4
ATG3-207ENST00000494571 RBM42Q9BTD8 480 aaKnown RBP6.27□□□□□ -1.41
ATG3-207ENST00000494571 RB1CC1Q8TDY2 1594 aa6.26□□□□□ -1.41
ATG3-207ENST00000494571 NACADO15069 1562 aa6.25□□□□□ -1.41
ATG3-207ENST00000494571 YTHDC1Q96MU7 727 aaKnown RBP6.25□□□□□ -1.41
ATG3-207ENST00000494571 ZEB1P37275 1124 aaPredicted RBP6.24□□□□□ -1.41
ATG3-207ENST00000494571 ANO8Q9HCE9 1232 aaPredicted RBP6.23□□□□□ -1.41
ATG3-207ENST00000494571 LHX8Q68G74 356 aa6.21□□□□□ -1.42
ATG3-207ENST00000494571 ABCC9O60706 1549 aa6.19□□□□□ -1.42
ATG3-207ENST00000494571 PCDH10Q9P2E7 1040 aa6.18□□□□□ -1.42
ATG3-207ENST00000494571 EIF5BO60841 1220 aaKnown RBP6.17□□□□□ -1.42
ATG3-207ENST00000494571 CCDC136Q96JN2 1154 aa6.17□□□□□ -1.42
ATG3-207ENST00000494571 TRIM26Q12899 539 aaPredicted RBP6.15□□□□□ -1.43
ATG3-207ENST00000494571 SUPT5HO00267 1087 aaKnown RBP6.14□□□□□ -1.43
ATG3-207ENST00000494571 PLEKHG5O94827 1062 aa6.14□□□□□ -1.43
ATG3-207ENST00000494571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.14□□□□□ -1.43
ATG3-207ENST00000494571 DIEXFQ68CQ4 756 aaKnown RBP6.13□□□□□ -1.43
ATG3-207ENST00000494571 SALL2Q9Y467 1007 aaPredicted RBP6.09□□□□□ -1.43
ATG3-207ENST00000494571 TSHZ2Q9NRE2 1034 aa6.09□□□□□ -1.43
ATG3-207ENST00000494571 CNKSR2Q8WXI2 1034 aa6.08□□□□□ -1.44
ATG3-207ENST00000494571 CAPN15O75808 1086 aa6.07□□□□□ -1.44
ATG3-207ENST00000494571 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.06□□□□□ -1.44
ATG3-207ENST00000494571 DCAF1Q9Y4B6 1507 aa6.05□□□□□ -1.44
ATG3-207ENST00000494571 LOC105371045A0A1W2PR82 267 aa6.05□□□□□ -1.44
ATG3-207ENST00000494571 HAX1O00165 279 aa6.05□□□□□ -1.44
ATG3-207ENST00000494571 UBE2Q2Q8WVN8 375 aa6.04□□□□□ -1.44
ATG3-207ENST00000494571 CUX2O14529 1486 aa6.02□□□□□ -1.45
ATG3-207ENST00000494571 DAXXQ9UER7 740 aaPredicted RBP6.01□□□□□ -1.45
ATG3-207ENST00000494571 PODXL2Q9NZ53 605 aa6.01□□□□□ -1.45
ATG3-207ENST00000494571 PKNOX2Q96KN3 472 aa6□□□□□ -1.45
ATG3-207ENST00000494571 RTN4Q9NQC3 1192 aaKnown RBP6□□□□□ -1.45
ATG3-207ENST00000494571 SUPT16HQ9Y5B9 1047 aaKnown RBP6□□□□□ -1.45
ATG3-207ENST00000494571 BCANQ96GW7 911 aa5.99□□□□□ -1.45
ATG3-207ENST00000494571 DNAJC5Q9H3Z4 198 aa5.99□□□□□ -1.45
ATG3-207ENST00000494571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.98□□□□□ -1.45
ATG3-207ENST00000494571 CCER1Q8TC90 406 aaPredicted RBP5.98□□□□□ -1.45
ATG3-207ENST00000494571 BICRAQ9NZM4 1560 aa5.98□□□□□ -1.45
ATG3-207ENST00000494571 UNC13AQ9UPW8 1703 aa5.98□□□□□ -1.45
ATG3-207ENST00000494571 DEKP35659 375 aaKnown RBP5.96□□□□□ -1.45
ATG3-207ENST00000494571 PPP4R3CPQ6ZMV5 832 aa5.95□□□□□ -1.46
ATG3-207ENST00000494571 MIER1Q8N108 512 aa5.94□□□□□ -1.46
ATG3-207ENST00000494571 PIP4P2Q8N4L2 257 aa5.94□□□□□ -1.46
ATG3-207ENST00000494571 SPINK5Q9NQ38 1064 aaPredicted RBP5.93□□□□□ -1.46
ATG3-207ENST00000494571 RBM19Q9Y4C8 960 aaKnown RBP5.92□□□□□ -1.46
ATG3-207ENST00000494571 ZNF219Q9P2Y4 722 aaPredicted RBP5.9□□□□□ -1.47
ATG3-207ENST00000494571 KCNA4P22459 653 aa5.89□□□□□ -1.47
ATG3-207ENST00000494571 IL27Q8NEV9 243 aa5.89□□□□□ -1.47
ATG3-207ENST00000494571 AKT1S1Q96B36 256 aa5.89□□□□□ -1.47
ATG3-207ENST00000494571 NBR1Q14596 966 aa5.88□□□□□ -1.47
ATG3-207ENST00000494571 EHMT2Q96KQ7 1210 aa5.87□□□□□ -1.47
ATG3-207ENST00000494571 A0A0U1RQG5 324 aaPredicted RBP5.86□□□□□ -1.47
ATG3-207ENST00000494571 ITGAEP38570 1179 aa5.86□□□□□ -1.47
ATG3-207ENST00000494571 FXR2P51116 673 aaKnown RBP eCLIP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms