RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 SEL1LQ9UBV2 794 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 CHMP2BQ9UQN3 213 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 USH1CQ9Y6N9 552 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 TNS1Q9HBL0 1735 aaKnown RBP8.06□□□□□ -1.12
BEST3-205ENST00000488961 CFAP73A6NFT4 308 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 F8VP50 259 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 HCRTO43612 131 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 GSTT1P30711 240 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 SERPINB4P48594 390 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 NCKAP1LP55160 1127 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 TNFAIP1Q13829 316 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 IFI16Q16666 785 aaKnown RBP8.06□□□□□ -1.12
BEST3-205ENST00000488961 SGO2Q562F6 1265 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 SEL1L2Q5TEA6 688 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 TMCO4Q5TGY1 634 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 ZDHHC24Q6UX98 284 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 C4orf19Q8IY42 314 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 C1orf131Q8NDD1 294 aaKnown RBP8.06□□□□□ -1.12
BEST3-205ENST00000488961 WHAMMQ8TF30 809 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 P3H4Q92791 437 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 ACAD9Q9H845 621 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 MINDY3Q9H8M7 445 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 PCSK1NQ9UHG2 260 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 TRIM33Q9UPN9 1127 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.06□□□□□ -1.12
BEST3-205ENST00000488961 EYSQ5T1H1 3165 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 MROH7Q68CQ1 1323 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 PAPPA2Q9BXP8 1791 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 C10orf71Q711Q0 1435 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 H0YGN5 161 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 TBC1D12O60347 775 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 GH1P01241 217 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 PSAPP07602 524 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 GNA15P30679 374 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 CCNFP41002 786 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 NUMBP49757 651 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 RABGGTBP53611 331 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 NCALDP61601 193 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 KRT76Q01546 638 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 PLCB3Q01970 1234 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 KRT17Q04695 432 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 KLC1Q07866 573 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 STRN3Q13033 797 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 TAF5Q15542 800 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 SGSM1Q2NKQ1 1148 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 C16orf87Q6PH81 154 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 C14orf80Q86SX3 495 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 EXOC3L1Q86VI1 746 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 CCNJLQ8IV13 435 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 MAP4K3Q8IVH8 894 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 SYCE1Q8N0S2 351 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 LPAR1Q92633 364 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 UPF1Q92900 1129 aaKnown RBP eCLIP8.06□□□□□ -1.12
BEST3-205ENST00000488961 ABTB1Q969K4 478 aaPredicted RBP8.06□□□□□ -1.12
BEST3-205ENST00000488961 LENG1Q96BZ8 264 aaPredicted RBP8.06□□□□□ -1.12
BEST3-205ENST00000488961 KLRG1Q96E93 195 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 PCYT2Q99447 389 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 ERP44Q9BS26 406 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 TEX13BQ9BXU2 312 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 DMAP1Q9NPF5 467 aaPredicted RBP8.06□□□□□ -1.12
BEST3-205ENST00000488961 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.06□□□□□ -1.12
BEST3-205ENST00000488961 HMGXB4Q9UGU5 601 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 NR2E3Q9Y5X4 410 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 NFS1Q9Y697 457 aa8.06□□□□□ -1.12
BEST3-205ENST00000488961 GTPBP10A4D1E9 387 aaKnown RBP8.05□□□□□ -1.12
BEST3-205ENST00000488961 SRRM3A6NNA2 597 aaPredicted RBP8.05□□□□□ -1.12
BEST3-205ENST00000488961 KIAA0391O15091 583 aaKnown RBP8.05□□□□□ -1.12
BEST3-205ENST00000488961 LSM1O15116 133 aaKnown RBP8.05□□□□□ -1.12
BEST3-205ENST00000488961 NDUFB5O43674 189 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 GRIN3BO60391 1043 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 UBOX5O94941 541 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 VTNP04004 478 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 ZNF286BP0CG31 522 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 POTEJP0CG39 1038 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 ETS2P15036 469 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 GTF2H1P32780 548 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 PEX5P50542 639 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 CAPSQ13938 189 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 CDO1Q16878 200 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 CCDC92Q53HC0 331 aaPredicted RBP8.05□□□□□ -1.12
BEST3-205ENST00000488961 BRDTQ58F21 947 aaPredicted RBP8.05□□□□□ -1.12
BEST3-205ENST00000488961 C10orf76Q5T2E6 689 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 EEF1DP3Q658K8 133 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 ABHD15Q6UXT9 468 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 NCCRP1Q6ZVX7 275 aaPredicted RBP8.05□□□□□ -1.12
BEST3-205ENST00000488961 GET4Q7L5D6 327 aaPredicted RBP8.05□□□□□ -1.12
BEST3-205ENST00000488961 GSTA5Q7RTV2 222 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 ZBTB8BQ8NAP8 495 aaPredicted RBP8.05□□□□□ -1.12
BEST3-205ENST00000488961 SMYD1Q8NB12 490 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 DDX1Q92499 740 aaKnown RBP8.05□□□□□ -1.12
BEST3-205ENST00000488961 SHC3Q92529 594 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 IFT43Q96FT9 208 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 DDX27Q96GQ7 796 aaKnown RBP8.05□□□□□ -1.12
BEST3-205ENST00000488961 MCEEQ96PE7 176 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 MKNK1Q9BUB5 465 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 MAGEB5Q9BZ81 275 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 FHDC1Q9C0D6 1143 aaPredicted RBP8.05□□□□□ -1.12
BEST3-205ENST00000488961 EPB41L4BQ9H329 900 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 ECT2Q9H8V3 914 aa8.05□□□□□ -1.12
BEST3-205ENST00000488961 TMBIM4Q9HC24 238 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms