RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 C1orf53Q5VUE5 145 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 TTC30AQ86WT1 665 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 CPNE8Q86YQ8 564 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 PASD1Q8IV76 773 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 RFFLQ8WZ73 363 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 NOX5Q96PH1 765 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 SEZ6LQ9BYH1 1024 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 NOD1Q9Y239 953 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 CCDC189A1A4V9 331 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 ZNF185O15231 689 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 URI1O94763 535 aaPredicted RBP8.79□□□□□ -1
BRCA1-208ENST00000468300 PAEPP09466 180 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 SELPP16109 830 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 CLCNKBP51801 687 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 NDST1P52848 882 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 PLEKHG4Q58EX7 1191 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 NAA35Q5VZE5 725 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 DENND1BQ6P3S1 775 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 C11orf96Q7Z7L8 435 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 PHF13Q86YI8 300 aaPredicted RBP8.79□□□□□ -1
BRCA1-208ENST00000468300 TMEM176AQ96HP8 235 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 TSPYL2Q9H2G4 693 aaPredicted RBP8.79□□□□□ -1
BRCA1-208ENST00000468300 SEPT11Q9NVA2 429 aaKnown RBP8.79□□□□□ -1
BRCA1-208ENST00000468300 KIAA1522Q9P206 1035 aaPredicted RBP8.79□□□□□ -1
BRCA1-208ENST00000468300 BARX2Q9UMQ3 279 aaPredicted RBP8.79□□□□□ -1
BRCA1-208ENST00000468300 PACSIN2Q9UNF0 486 aaPredicted RBP8.79□□□□□ -1
BRCA1-208ENST00000468300 JRKLQ9Y4A0 524 aa8.79□□□□□ -1
BRCA1-208ENST00000468300 FNDC1Q4ZHG4 1894 aaPredicted RBP8.79□□□□□ -1
BRCA1-208ENST00000468300 NLRC5Q86WI3 1866 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 KPNA7A9QM74 516 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 PDE2AO00408 941 aaPredicted RBP8.78□□□□□ -1
BRCA1-208ENST00000468300 THAP12O43422 761 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 BUB1BO60566 1050 aaPredicted RBP8.78□□□□□ -1
BRCA1-208ENST00000468300 FTCDO95954 541 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 LMO2P25791 158 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 TNNT3P45378 269 aaPredicted RBP8.78□□□□□ -1
BRCA1-208ENST00000468300 AARSP49588 968 aaKnown RBP eCLIP8.78□□□□□ -1
BRCA1-208ENST00000468300 SCNN1GP51170 649 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 GPC5P78333 572 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 UPP1Q16831 310 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 PKDCCQ504Y2 493 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 CLLU1OSQ5K130 101 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 KIAA0319Q5VV43 1072 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 FBXO46Q6PJ61 603 aaPredicted RBP8.78□□□□□ -1
BRCA1-208ENST00000468300 CTU1Q7Z7A3 348 aaKnown RBP8.78□□□□□ -1
BRCA1-208ENST00000468300 NT5DC3Q86UY8 548 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 COG1Q8WTW3 980 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 TSC1Q92574 1164 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 TRIM7Q9C029 511 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 DPEP3Q9H4B8 488 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 FAM124BQ9H5Z6 455 aaPredicted RBP8.78□□□□□ -1
BRCA1-208ENST00000468300 TJP2Q9UDY2 1190 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 SNX12Q9UMY4 172 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 L1RE1Q9UN81 338 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 SNX9Q9Y5X1 595 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 MICAL3Q7RTP6 2002 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 ALPK3Q96L96 1907 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 PTPRSQ13332 1948 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 F8W810 466 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 PITPNM1O00562 1244 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 GABBR2O75899 941 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 ZSCAN20P17040 1043 aaPredicted RBP8.78□□□□□ -1
BRCA1-208ENST00000468300 RAB27AP51159 221 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 LBX1P52954 281 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 OSTM1Q86WC4 334 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 CREG2Q8IUH2 290 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 C12orf29Q8N999 325 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 RABGGTAQ92696 567 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 PCDH10Q9P2E7 1040 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 CDC23Q9UJX2 597 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 TACC1O75410 805 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 NAT2P11245 290 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 PRLRP16471 622 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 CAPN2P17655 700 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 MMP8P22894 467 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 GJA8P48165 433 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 MYO1EQ12965 1108 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 E2F5Q15329 346 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 TRIM60Q495X7 471 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 PPP1R15BQ5SWA1 713 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 BTBD6Q96KE9 485 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 LHX5Q9H2C1 402 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 IGSF5Q9NSI5 407 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 GTF3C4Q9UKN8 822 aa8.78□□□□□ -1
BRCA1-208ENST00000468300 O00370 1275 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 GABRDO14764 452 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 PQBP1O60828 265 aaKnown RBP8.77□□□□□ -1.01
BRCA1-208ENST00000468300 CXCL10P02778 98 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 THP07101 528 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 RRM1P23921 792 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 ITGB8P26012 769 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 ATN1P54259 1190 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-208ENST00000468300 CCDC142Q17RM4 750 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 DCAF12L1Q5VU92 463 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 PDCL2Q8N4E4 241 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 C1orf131Q8NDD1 294 aaKnown RBP8.77□□□□□ -1.01
BRCA1-208ENST00000468300 CD101Q93033 1021 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 HES6Q96HZ4 224 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 RSAD1Q9HA92 442 aa8.77□□□□□ -1.01
BRCA1-208ENST00000468300 LUC7LQ9NQ29 371 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms