RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 RUSC1Q9BVN2 902 aa9.31□□□□□ -0.92
DDR1-242ENST00000465966 OXCT2Q9BYC2 517 aaPredicted RBP9.31□□□□□ -0.92
DDR1-242ENST00000465966 NAT10Q9H0A0 1025 aaKnown RBP9.31□□□□□ -0.92
DDR1-242ENST00000465966 RBM12Q9NTZ6 932 aaKnown RBP9.31□□□□□ -0.92
DDR1-242ENST00000465966 EXOC1Q9NV70 894 aa9.31□□□□□ -0.92
DDR1-242ENST00000465966 CEP72Q9P209 647 aa9.31□□□□□ -0.92
DDR1-242ENST00000465966 TNFSF13BQ9Y275 285 aa9.31□□□□□ -0.92
DDR1-242ENST00000465966 USP20Q9Y2K6 914 aa9.31□□□□□ -0.92
DDR1-242ENST00000465966 PHLPP2Q6ZVD8 1323 aa9.31□□□□□ -0.92
DDR1-242ENST00000465966 CCDC163A0A0D9SF12 145 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 NPHP3-ACAD11A0A0J9YXS1 232 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 PPP1R3GB7ZBB8 358 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 NRG2O14511 850 aaPredicted RBP9.3□□□□□ -0.92
DDR1-242ENST00000465966 IKBKBO14920 756 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 ATG13O75143 517 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 MOSPD3O75425 235 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 RPP40O75818 363 aaKnown RBP9.3□□□□□ -0.92
DDR1-242ENST00000465966 FGF19O95750 216 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 MUTP22033 750 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 CTHP32929 405 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 ALDH1A3P47895 512 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 SOX9P48436 509 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 OSTNP61366 133 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 AMPD3Q01432 767 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 MYL5Q02045 173 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 CACNB1Q02641 598 aaPredicted RBP9.3□□□□□ -0.92
DDR1-242ENST00000465966 SOX4Q06945 474 aaPredicted RBP9.3□□□□□ -0.92
DDR1-242ENST00000465966 EHHADHQ08426 723 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 FCHO2Q0JRZ9 810 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 ZNF568Q3ZCX4 644 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 ARHGAP29Q52LW3 1261 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 XKR4Q5GH76 650 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 ALKAL1Q6UXT8 129 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 Q6ZS52 159 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 UNC13DQ70J99 1090 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 SYT2Q8N9I0 419 aaPredicted RBP9.3□□□□□ -0.92
DDR1-242ENST00000465966 KIAA0895Q8NCT3 520 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 SHKBP1Q8TBC3 707 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 GAB3Q8WWW8 586 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 DDX12PQ92771 950 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 KIFAP3Q92845 792 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 HPS3Q969F9 1004 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 SUSD3Q96L08 255 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 ACAP3Q96P50 834 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 TCHPQ9BT92 498 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 KIFC3Q9BVG8 833 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 HSD3B7Q9H2F3 369 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 BHMT2Q9H2M3 363 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 THG1LQ9NWX6 298 aaKnown RBP9.3□□□□□ -0.92
DDR1-242ENST00000465966 DACH1Q9UI36 760 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 DNM3Q9UQ16 869 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 CTNND2Q9UQB3 1225 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 PCDHGA5Q9Y5G8 931 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 MIA3Q5JRA6 1907 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 PATJQ8NI35 1801 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 ZFHX4Q86UP3 3567 aa9.3□□□□□ -0.92
DDR1-242ENST00000465966 A0A1W2PRU2 124 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 FRMD3A2A2Y4 597 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 CCDC169A6NNP5 214 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 BECN2A8MW95 431 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 TM4SF5O14894 197 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 EPN2O95208 641 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 KCNK5O95279 499 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 KCNE1P15382 129 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 RAP1GAPP47736 663 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 PLCB2Q00722 1185 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 YWHAHQ04917 246 aaPredicted RBP9.29□□□□□ -0.92
DDR1-242ENST00000465966 RAD51AP2Q09MP3 1159 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 CCINQ13939 588 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 PON2Q15165 354 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 CCDC6Q16204 474 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 ARHGAP15Q53QZ3 475 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 ARSHQ5FYA8 562 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 RNF43Q68DV7 783 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 RNF19BQ6ZMZ0 732 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 ARID3BQ8IVW6 561 aaPredicted RBP9.29□□□□□ -0.92
DDR1-242ENST00000465966 KCTD17Q8N5Z5 321 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 TTC8Q8TAM2 541 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 REEP2Q9BRK0 252 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 LSM14BQ9BX40 385 aaKnown RBP9.29□□□□□ -0.92
DDR1-242ENST00000465966 MRPL4Q9BYD3 311 aaKnown RBP9.29□□□□□ -0.92
DDR1-242ENST00000465966 FGFBP2Q9BYJ0 223 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 LRRC27Q9C0I9 530 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 VPS45Q9NRW7 570 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 OBP2AQ9NY56 170 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 GTSE1Q9NYZ3 720 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 PCDHB8Q9UN66 801 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 SLC8A2Q9UPR5 921 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 YIPF1Q9Y548 306 aa9.29□□□□□ -0.92
DDR1-242ENST00000465966 MTCL1Q9Y4B5 1905 aaKnown RBP9.29□□□□□ -0.92
DDR1-242ENST00000465966 PVALEFA0A1B0GWK0 134 aa9.28□□□□□ -0.92
DDR1-242ENST00000465966 GOLGA6L19H0YKK7 550 aa9.28□□□□□ -0.92
DDR1-242ENST00000465966 AKAP3O75969 853 aa9.28□□□□□ -0.92
DDR1-242ENST00000465966 EDN1P05305 212 aa9.28□□□□□ -0.92
DDR1-242ENST00000465966 KRT18P05783 430 aaKnown RBP9.28□□□□□ -0.92
DDR1-242ENST00000465966 MCF2P10911 925 aa9.28□□□□□ -0.92
DDR1-242ENST00000465966 IDEP14735 1019 aa9.28□□□□□ -0.92
DDR1-242ENST00000465966 ERCC5P28715 1186 aaPredicted RBP9.28□□□□□ -0.92
DDR1-242ENST00000465966 PRCPP42785 496 aa9.28□□□□□ -0.92
DDR1-242ENST00000465966 STX17P56962 302 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms