RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 OLA1Q9NTK5 396 aaKnown RBP15.3■□□□□ 0.04
PCNX1-202ENST00000439984 RCAN1P53805 252 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 CNGA2Q16280 664 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 ATG9AQ7Z3C6 839 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 CROCCP3Q8IVE0 287 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 ZNF335Q9H4Z2 1342 aaPredicted RBP15.3■□□□□ 0.04
PCNX1-202ENST00000439984 GDF11O95390 407 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 SLC5A9Q2M3M2 681 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 PERM1Q5SV97 790 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 PADI6Q6TGC4 694 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 OXNAD1Q96HP4 312 aaPredicted RBP15.3■□□□□ 0.04
PCNX1-202ENST00000439984 RUBCNLQ9H714 662 aa15.3■□□□□ 0.04
PCNX1-202ENST00000439984 ZNF23P17027 643 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 PXDNLA1KZ92 1463 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 ANXA13P27216 316 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 CDK17Q00537 523 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 XRCC4Q13426 336 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 PDK3Q15120 406 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 PPP1R15BQ5SWA1 713 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 GRID1Q9ULK0 1009 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 RABL6Q3YEC7 729 aaPredicted RBP15.29■□□□□ 0.04
PCNX1-202ENST00000439984 TTI2Q6NXR4 508 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 OR8H2Q8N162 312 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 JADE3Q92613 823 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.29■□□□□ 0.04
PCNX1-202ENST00000439984 RABGEF1Q9UJ41 708 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 ITGB1BP2Q9UKP3 347 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 RFX1P22670 979 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 BLMHQ13867 455 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 SHPRHQ149N8 1683 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 PDIA6Q15084 440 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 SMTNL2Q2TAL5 461 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 SPATA31D1Q6ZQQ2 1576 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 CD302Q8IX05 232 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 MTA3Q9BTC8 594 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 WHRNQ9P202 907 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 DIP2BQ9P265 1576 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 VIL1P09327 827 aaKnown RBP15.29■□□□□ 0.04
PCNX1-202ENST00000439984 SP100P23497 879 aaPredicted RBP15.29■□□□□ 0.04
PCNX1-202ENST00000439984 HMGB2P26583 209 aaKnown RBP15.29■□□□□ 0.04
PCNX1-202ENST00000439984 ST13P50502 369 aaKnown RBP15.29■□□□□ 0.04
PCNX1-202ENST00000439984 PPP1R14BQ96C90 147 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 TUBGCP3Q96CW5 907 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 PGBD4Q96DM1 585 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 SEMA6AQ9H2E6 1030 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 ZNF804BA4D1E1 1349 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 ZSCAN9O15535 394 aaPredicted RBP15.29■□□□□ 0.04
PCNX1-202ENST00000439984 PTENP60484 403 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 ALCAMQ13740 583 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 LAMC2Q13753 1193 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 MTFR1Q15390 333 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 TRADDQ15628 312 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 ERFEQ4G0M1 354 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 ZNF618Q5T7W0 954 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 ILDR1Q86SU0 546 aaPredicted RBP15.29■□□□□ 0.04
PCNX1-202ENST00000439984 SULF1Q8IWU6 871 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 PSPC1Q8WXF1 523 aaKnown RBP15.29■□□□□ 0.04
PCNX1-202ENST00000439984 PAFAH2Q99487 392 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 TRIM39Q9HCM9 518 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 CNOT7Q9UIV1 285 aaKnown RBP15.29■□□□□ 0.04
PCNX1-202ENST00000439984 CDY2AQ9Y6F7 541 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 CDY1Q9Y6F8 540 aa15.29■□□□□ 0.04
PCNX1-202ENST00000439984 TMEM63BQ5T3F8 832 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 KCNV1Q6PIU1 500 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 ZNF571Q7Z3V5 609 aaPredicted RBP15.28■□□□□ 0.04
PCNX1-202ENST00000439984 FBXO36Q8NEA4 188 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 ERLEC1Q96DZ1 483 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 AGAP3Q96P47 875 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 MCEEQ96PE7 176 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 HACD3Q9P035 362 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 CCDC130P13994 396 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 VAV1P15498 845 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 YY1P25490 414 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 USP46P62068 366 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 RNF19BQ6ZMZ0 732 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 TAS2R42Q7RTR8 314 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 CDH24Q86UP0 819 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 KBTBD2Q8IY47 623 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 PPP1R16BQ96T49 567 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 ZMYND8Q9ULU4 1186 aaPredicted RBP15.28■□□□□ 0.04
PCNX1-202ENST00000439984 ATXN2Q99700 1313 aaKnown RBP15.28■□□□□ 0.04
PCNX1-202ENST00000439984 PAMP19021 973 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 RAB14P61106 215 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 GRM4Q14833 912 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 NRF1Q16656 503 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 PDPK2PQ6A1A2 396 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 FAM71DQ8N9W8 422 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 FOXP3Q9BZS1 431 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 SELENONQ9NZV5 590 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 FLT1P17948 1338 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 SPDYE5A6NIY4 337 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 ABCB5Q2M3G0 1257 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 ATP8B4Q8TF62 1192 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 SLC7A3Q8WY07 619 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 COPS7BQ9H9Q2 264 aaPredicted RBP15.28■□□□□ 0.04
PCNX1-202ENST00000439984 SCN3BQ9NY72 215 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 SARSP49591 514 aaKnown RBP15.28■□□□□ 0.04
PCNX1-202ENST00000439984 NR1D2Q14995 579 aa15.28■□□□□ 0.04
PCNX1-202ENST00000439984 RWDD4Q6NW29 188 aaKnown RBP15.28■□□□□ 0.04
PCNX1-202ENST00000439984 ASPSCR1Q9BZE9 553 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms