RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 PPP1R15BQ5SWA1 713 aa27.23■■□□□ 1.95
CPNE1-216ENST00000437340 CD99L2Q8TCZ2 262 aa27.23■■□□□ 1.95
CPNE1-216ENST00000437340 NEUROG2Q9H2A3 272 aa27.23■■□□□ 1.95
CPNE1-216ENST00000437340 TCRBV7S2A1N4TA0A589 114 aa27.22■■□□□ 1.95
CPNE1-216ENST00000437340 GSCP56915 257 aaPredicted RBP27.22■■□□□ 1.95
CPNE1-216ENST00000437340 TMEM62Q0P6H9 643 aa27.22■■□□□ 1.95
CPNE1-216ENST00000437340 DENND1BQ6P3S1 775 aa27.22■■□□□ 1.95
CPNE1-216ENST00000437340 TTC27Q6P3X3 843 aa27.22■■□□□ 1.95
CPNE1-216ENST00000437340 RUFY4Q6ZNE9 571 aa27.22■■□□□ 1.95
CPNE1-216ENST00000437340 SLCO2A1Q92959 643 aa27.22■■□□□ 1.95
CPNE1-216ENST00000437340 ZIM3Q96PE6 472 aa27.22■■□□□ 1.95
CPNE1-216ENST00000437340 OSMRQ99650 979 aa27.22■■□□□ 1.95
CPNE1-216ENST00000437340 GINS2Q9Y248 185 aa27.22■■□□□ 1.95
CPNE1-216ENST00000437340 RPL7AP62424 266 aaKnown RBP27.22■■□□□ 1.95
CPNE1-216ENST00000437340 LRRC38Q5VT99 294 aa27.22■■□□□ 1.95
CPNE1-216ENST00000437340 EXD1Q8NHP7 514 aa27.22■■□□□ 1.95
CPNE1-216ENST00000437340 RIN2Q8WYP3 895 aaPredicted RBP27.22■■□□□ 1.95
CPNE1-216ENST00000437340 SNX27Q96L92 541 aa27.22■■□□□ 1.95
CPNE1-216ENST00000437340 DPH5Q9H2P9 285 aa27.22■■□□□ 1.95
CPNE1-216ENST00000437340 BARX2Q9UMQ3 279 aaPredicted RBP27.22■■□□□ 1.95
CPNE1-216ENST00000437340 MYL3P08590 195 aa27.21■■□□□ 1.95
CPNE1-216ENST00000437340 VDRP11473 427 aa27.21■■□□□ 1.95
CPNE1-216ENST00000437340 YARSP54577 528 aaKnown RBP27.21■■□□□ 1.95
CPNE1-216ENST00000437340 MTMR3Q13615 1198 aa27.21■■□□□ 1.95
CPNE1-216ENST00000437340 PIGHQ14442 188 aaPredicted RBP27.21■■□□□ 1.95
CPNE1-216ENST00000437340 DCUN1D2Q6PH85 259 aa27.21■■□□□ 1.95
CPNE1-216ENST00000437340 NIPA2Q8N8Q9 360 aa27.21■■□□□ 1.95
CPNE1-216ENST00000437340 TRPV1Q8NER1 839 aa27.21■■□□□ 1.95
CPNE1-216ENST00000437340 ELOVL4Q9GZR5 314 aa27.21■■□□□ 1.95
CPNE1-216ENST00000437340 CDHR5Q9HBB8 845 aa27.21■■□□□ 1.95
CPNE1-216ENST00000437340 WDR35Q9P2L0 1181 aa27.21■■□□□ 1.95
CPNE1-216ENST00000437340 KIAA1257Q9ULG3 409 aa27.21■■□□□ 1.95
CPNE1-216ENST00000437340 CITO14578 2027 aa27.2■■□□□ 1.95
CPNE1-216ENST00000437340 TAS2R40P59535 323 aa27.2■■□□□ 1.95
CPNE1-216ENST00000437340 MYO1EQ12965 1108 aa27.2■■□□□ 1.95
CPNE1-216ENST00000437340 CCDC105Q8IYK2 499 aa27.2■■□□□ 1.95
CPNE1-216ENST00000437340 PIK3R5Q8WYR1 880 aa27.2■■□□□ 1.95
CPNE1-216ENST00000437340 ZBTB9Q96C00 473 aa27.2■■□□□ 1.95
CPNE1-216ENST00000437340 MCEEQ96PE7 176 aa27.2■■□□□ 1.95
CPNE1-216ENST00000437340 HOMER3Q9NSC5 361 aa27.2■■□□□ 1.95
CPNE1-216ENST00000437340 SNTG2Q9NY99 539 aa27.2■■□□□ 1.95
CPNE1-216ENST00000437340 HMGCRP04035 888 aa27.2■■□□□ 1.94
CPNE1-216ENST00000437340 GNAT1P11488 350 aa27.2■■□□□ 1.94
CPNE1-216ENST00000437340 GYS2P54840 703 aa27.2■■□□□ 1.94
CPNE1-216ENST00000437340 HIC1Q14526 733 aa27.2■■□□□ 1.94
CPNE1-216ENST00000437340 CNGA2Q16280 664 aa27.2■■□□□ 1.94
CPNE1-216ENST00000437340 PTPN20Q4JDL3 420 aa27.2■■□□□ 1.94
CPNE1-216ENST00000437340 SGO2Q562F6 1265 aa27.2■■□□□ 1.94
CPNE1-216ENST00000437340 LRIG3Q6UXM1 1119 aa27.2■■□□□ 1.94
CPNE1-216ENST00000437340 NME8Q8N427 588 aa27.2■■□□□ 1.94
CPNE1-216ENST00000437340 DNAJB3Q8WWF6 145 aa27.2■■□□□ 1.94
CPNE1-216ENST00000437340 TWNKQ96RR1 684 aa27.2■■□□□ 1.94
CPNE1-216ENST00000437340 FAM129AQ9BZQ8 928 aa27.2■■□□□ 1.94
CPNE1-216ENST00000437340 FAM204AQ9H8W3 233 aa27.2■■□□□ 1.94
CPNE1-216ENST00000437340 PARP2Q9UGN5 583 aa27.2■■□□□ 1.94
CPNE1-216ENST00000437340 GJB6O95452 261 aa27.19■■□□□ 1.94
CPNE1-216ENST00000437340 HOXC8P31273 242 aa27.19■■□□□ 1.94
CPNE1-216ENST00000437340 ZBTB6Q15916 424 aa27.19■■□□□ 1.94
CPNE1-216ENST00000437340 FSCN1Q16658 493 aaKnown RBP27.19■■□□□ 1.94
CPNE1-216ENST00000437340 SPDYCQ5MJ68 293 aa27.19■■□□□ 1.94
CPNE1-216ENST00000437340 TMEM130Q8N3G9 435 aa27.19■■□□□ 1.94
CPNE1-216ENST00000437340 TSPAN18Q96SJ8 248 aa27.19■■□□□ 1.94
CPNE1-216ENST00000437340 FMO2Q99518 471 aa27.19■■□□□ 1.94
CPNE1-216ENST00000437340 TRIM31Q9BZY9 425 aa27.19■■□□□ 1.94
CPNE1-216ENST00000437340 ZDHHC18Q9NUE0 388 aa27.19■■□□□ 1.94
CPNE1-216ENST00000437340 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.19■■□□□ 1.942e-6■■■■■ 55.4
CPNE1-216ENST00000437340 USTQ9Y2C2 406 aa27.19■■□□□ 1.94
CPNE1-216ENST00000437340 RALGAPA2Q2PPJ7 1873 aa27.19■■□□□ 1.94
CPNE1-216ENST00000437340 C17orf102A2RUQ5 167 aa27.18■■□□□ 1.94
CPNE1-216ENST00000437340 SIGLEC16A6NMB1 481 aa27.18■■□□□ 1.94
CPNE1-216ENST00000437340 CYBAP13498 195 aa27.18■■□□□ 1.94
CPNE1-216ENST00000437340 AKR1A1P14550 325 aa27.18■■□□□ 1.94
CPNE1-216ENST00000437340 CETN2P41208 172 aa27.18■■□□□ 1.94
CPNE1-216ENST00000437340 SNX17Q15036 470 aa27.18■■□□□ 1.94
CPNE1-216ENST00000437340 MFSD14CQ5VZR4 134 aa27.18■■□□□ 1.94
CPNE1-216ENST00000437340 ALKAL1Q6UXT8 129 aa27.18■■□□□ 1.94
CPNE1-216ENST00000437340 EIF2AQ9BY44 585 aaKnown RBP27.18■■□□□ 1.94
CPNE1-216ENST00000437340 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.18■■□□□ 1.94
CPNE1-216ENST00000437340 CNTN3Q9P232 1028 aa27.18■■□□□ 1.94
CPNE1-216ENST00000437340 FEZ2Q9UHY8 353 aaPredicted RBP27.18■■□□□ 1.94
CPNE1-216ENST00000437340 TREHO43280 583 aa27.17■■□□□ 1.94
CPNE1-216ENST00000437340 ECEL1O95672 775 aa27.17■■□□□ 1.94
CPNE1-216ENST00000437340 IRX5P78411 483 aaPredicted RBP27.17■■□□□ 1.94
CPNE1-216ENST00000437340 BEX3Q00994 111 aa27.17■■□□□ 1.94
CPNE1-216ENST00000437340 TRIM32Q13049 653 aa27.17■■□□□ 1.94
CPNE1-216ENST00000437340 KLF1Q13351 362 aaPredicted RBP27.17■■□□□ 1.94
CPNE1-216ENST00000437340 TMC3Q7Z5M5 1100 aa27.17■■□□□ 1.94
CPNE1-216ENST00000437340 LRRC52Q8N7C0 313 aa27.17■■□□□ 1.94
CPNE1-216ENST00000437340 BEST2Q8NFU1 509 aa27.17■■□□□ 1.94
CPNE1-216ENST00000437340 FNIP1Q8TF40 1166 aa27.17■■□□□ 1.94
CPNE1-216ENST00000437340 RBM41Q96IZ5 413 aaKnown RBP27.17■■□□□ 1.94
CPNE1-216ENST00000437340 PKNOX2Q96KN3 472 aa27.17■■□□□ 1.94
CPNE1-216ENST00000437340 HMGXB4Q9UGU5 601 aa27.17■■□□□ 1.94
CPNE1-216ENST00000437340 SRRDQ9UH36 339 aa27.17■■□□□ 1.94
CPNE1-216ENST00000437340 CYTH4Q9UIA0 394 aa27.17■■□□□ 1.94
CPNE1-216ENST00000437340 KPNA6O60684 536 aa27.17■■□□□ 1.94
CPNE1-216ENST00000437340 HSD17B3P37058 310 aa27.17■■□□□ 1.94
CPNE1-216ENST00000437340 ZNF252P-AS1Q0IIN9 211 aa27.17■■□□□ 1.94
CPNE1-216ENST00000437340 ZNF268Q14587 947 aaPredicted RBP27.17■■□□□ 1.94
CPNE1-216ENST00000437340 STILQ15468 1287 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms