RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 ADAM12O43184 909 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 P4HA1P13674 534 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 CYP11B1P15538 503 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 CTNNB1P35222 781 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 AARSP49588 968 aaKnown RBP eCLIP14.33□□□□□ -0.12
PRPF39-202ENST00000424478 ACRBPQ8NEB7 543 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 OLIG1Q8TAK6 271 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 SUSD3Q96L08 255 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 UROC1Q96N76 676 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 COLEC11Q9BWP8 271 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 PBX4Q9BYU1 374 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 NHEJ1Q9H9Q4 299 aaPredicted RBP14.33□□□□□ -0.12
PRPF39-202ENST00000424478 FBXL5Q9UKA1 691 aa14.33□□□□□ -0.12
PRPF39-202ENST00000424478 MYBPHLA2RUH7 354 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 ADORA2BP29275 332 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 OVOS1Q6IE37 1185 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 UBA3Q8TBC4 463 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 MTIF3Q9H2K0 278 aaKnown RBP14.32□□□□□ -0.12
PRPF39-202ENST00000424478 TMLHEQ9NVH6 421 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 BARX2Q9UMQ3 279 aaPredicted RBP14.32□□□□□ -0.12
PRPF39-202ENST00000424478 STXBP5LQ9Y2K9 1186 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 ODC1P11926 461 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 CHRNB2P17787 502 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 GSDMDP57764 484 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 TSR1Q2NL82 804 aaKnown RBP14.32□□□□□ -0.12
PRPF39-202ENST00000424478 VARS2Q5ST30 1063 aaKnown RBP14.32□□□□□ -0.12
PRPF39-202ENST00000424478 LLGL2Q6P1M3 1020 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 LRRTM3Q86VH5 581 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 SLC39A11Q8N1S5 342 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 LNX1Q8TBB1 728 aaPredicted RBP14.32□□□□□ -0.12
PRPF39-202ENST00000424478 TMEM169Q96HH4 297 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 PCDHB18PQ96TA0 734 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 AIPL1Q9NZN9 384 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 NLRC5Q86WI3 1866 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 A0A087X0T9 212 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 RFXAPO00287 272 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 FGF18O76093 207 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 STAU1O95793 577 aaKnown RBP14.32□□□□□ -0.12
PRPF39-202ENST00000424478 FAM228BP0C875 321 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 YWHAHQ04917 246 aaPredicted RBP14.32□□□□□ -0.12
PRPF39-202ENST00000424478 MDH1BQ5I0G3 518 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 SLC30A5Q8TAD4 765 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 TMEM176AQ96HP8 235 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 TSPAN18Q96SJ8 248 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 NKX2-4Q9H2Z4 354 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 CRTAC1Q9NQ79 661 aa14.32□□□□□ -0.12
PRPF39-202ENST00000424478 ZNHIT6Q9NWK9 470 aaKnown RBP14.32□□□□□ -0.12
PRPF39-202ENST00000424478 NOCTQ9UK39 431 aaKnown RBP14.32□□□□□ -0.12
PRPF39-202ENST00000424478 M0QZQ0 153 aa14.31□□□□□ -0.12
PRPF39-202ENST00000424478 TULP2O00295 520 aa14.31□□□□□ -0.12
PRPF39-202ENST00000424478 ZNF263O14978 683 aa14.31□□□□□ -0.12
PRPF39-202ENST00000424478 DNAJB1P25685 340 aa14.31□□□□□ -0.12
PRPF39-202ENST00000424478 PPP1R26Q5T8A7 1209 aaPredicted RBP14.31□□□□□ -0.12
PRPF39-202ENST00000424478 RIN2Q8WYP3 895 aaPredicted RBP14.31□□□□□ -0.12
PRPF39-202ENST00000424478 PANX2Q96RD6 677 aa14.31□□□□□ -0.12
PRPF39-202ENST00000424478 NT5C1AQ9BXI3 368 aa14.31□□□□□ -0.12
PRPF39-202ENST00000424478 SF3B1O75533 1304 aaKnown RBP eCLIP14.31□□□□□ -0.12
PRPF39-202ENST00000424478 ZNF132P52740 706 aa14.31□□□□□ -0.12
PRPF39-202ENST00000424478 INCA1Q0VD86 236 aa14.31□□□□□ -0.12
PRPF39-202ENST00000424478 VPS52Q8N1B4 723 aa14.31□□□□□ -0.12
PRPF39-202ENST00000424478 TOP6BLQ8N6T0 577 aa14.31□□□□□ -0.12
PRPF39-202ENST00000424478 DEF6Q9H4E7 631 aa14.31□□□□□ -0.12
PRPF39-202ENST00000424478 TJP2Q9UDY2 1190 aa14.31□□□□□ -0.12
PRPF39-202ENST00000424478 SOAT2O75908 522 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 ABL1P00519 1130 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 PDE6CP51160 858 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 CACNA2D1P54289 1103 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 MEA1Q16626 185 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 ENOSF1Q7L5Y1 443 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 TTC9BQ8N6N2 239 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 ZNF606Q8WXB4 792 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 CPA5Q8WXQ8 436 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 DDX1Q92499 740 aaKnown RBP14.3□□□□□ -0.12
PRPF39-202ENST00000424478 TMEM175Q9BSA9 504 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 PACSIN1Q9BY11 444 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 TMEM30AQ9NV96 361 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 SPG21Q9NZD8 308 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 COL6A3P12111 3177 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 DDX3XO00571 662 aaKnown RBP eCLIP14.3□□□□□ -0.12
PRPF39-202ENST00000424478 SERPING1P05155 500 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 FERP16591 822 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 FMO1Q01740 532 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 DENND1BQ6P3S1 775 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 SLC2A14Q8TDB8 520 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 CYFIP2Q96F07 1278 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 SYT15Q9BQS2 421 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 EDEM3Q9BZQ6 932 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 PDCL3Q9H2J4 239 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 CYP3A43Q9HB55 503 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 GABRDO14764 452 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 SPATA31D3P0C874 917 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 LAG3P18627 525 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 RFX1P22670 979 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 CTXN3Q4LDR2 81 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 KIAA1841Q6NSI8 718 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 SPATA31D4Q6ZUB0 917 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 LIMS2Q7Z4I7 341 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 B3GALNT2Q8NCR0 500 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 PHOSPHO2Q8TCD6 241 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 ARNTL2Q8WYA1 636 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms