RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 TPD52L1Q16890 204 aaPredicted RBP25.53■■□□□ 1.68
UBE2E3-202ENST00000410062 CREBRFQ8IUR6 639 aa25.53■■□□□ 1.68
UBE2E3-202ENST00000410062 ATAD1Q8NBU5 361 aa25.53■■□□□ 1.68
UBE2E3-202ENST00000410062 FBXL13Q8NEE6 735 aa25.53■■□□□ 1.68
UBE2E3-202ENST00000410062 ADAMTS19Q8TE59 1207 aa25.53■■□□□ 1.68
UBE2E3-202ENST00000410062 SMG7Q92540 1137 aaKnown RBP25.53■■□□□ 1.68
UBE2E3-202ENST00000410062 TAF4BQ92750 862 aa25.53■■□□□ 1.68
UBE2E3-202ENST00000410062 NECAB3Q96P71 396 aaPredicted RBP25.53■■□□□ 1.68
UBE2E3-202ENST00000410062 IMPG2Q9BZV3 1241 aa25.53■■□□□ 1.68
UBE2E3-202ENST00000410062 CRISPLD1Q9H336 500 aa25.53■■□□□ 1.68
UBE2E3-202ENST00000410062 TACC1O75410 805 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 PDGFRBP09619 1106 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 MTHFRP42898 656 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 MARSP56192 900 aaKnown RBP25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 TSPY1Q01534 308 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 DUSP4Q13115 394 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 TRIM59Q8IWR1 403 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 OR6B3Q8NGW1 331 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 SNX25Q9H3E2 840 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 POMKQ9H5K3 350 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 PIDD1Q9HB75 910 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 APOBEC3GQ9HC16 384 aaKnown RBP25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 TMLHEQ9NVH6 421 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 RAB20Q9NX57 234 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 SLC27A5Q9Y2P5 690 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 NME7Q9Y5B8 376 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 HNRNPA1P09651 372 aaKnown RBP eCLIP25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 CCDC192P0DO97 292 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 HOXA9P31269 272 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 GNL1P36915 607 aaPredicted RBP25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 NOP14P78316 857 aaKnown RBP25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 CCDC142Q17RM4 750 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 KLHL40Q2TBA0 621 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 INTS6LQ5JSJ4 861 aaKnown RBP25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 IRF2BP1Q8IU81 584 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 DCP1BQ8IZD4 617 aaKnown RBP25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 CNOT6LQ96LI5 555 aaKnown RBP25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 SDCBP2Q9H190 292 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 MAFFQ9ULX9 164 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 INSL5Q9Y5Q6 135 aa25.52■■□□□ 1.68
UBE2E3-202ENST00000410062 ATP2C2O75185 946 aa25.51■■□□□ 1.67
UBE2E3-202ENST00000410062 PAPLNO95428 1278 aa25.51■■□□□ 1.67
UBE2E3-202ENST00000410062 P4HA1P13674 534 aa25.51■■□□□ 1.67
UBE2E3-202ENST00000410062 PCSK1P29120 753 aa25.51■■□□□ 1.67
UBE2E3-202ENST00000410062 FMO5P49326 533 aa25.51■■□□□ 1.67
UBE2E3-202ENST00000410062 PSMC1P62191 440 aaKnown RBP25.51■■□□□ 1.67
UBE2E3-202ENST00000410062 STX1AQ16623 288 aa25.51■■□□□ 1.67
UBE2E3-202ENST00000410062 TTC9BQ8N6N2 239 aa25.51■■□□□ 1.67
UBE2E3-202ENST00000410062 NECTIN4Q96NY8 510 aa25.51■■□□□ 1.67
UBE2E3-202ENST00000410062 ANO10Q9NW15 660 aa25.51■■□□□ 1.67
UBE2E3-202ENST00000410062 GTF3C4Q9UKN8 822 aa25.51■■□□□ 1.67
UBE2E3-202ENST00000410062 LRG1P02750 347 aa25.5■■□□□ 1.67
UBE2E3-202ENST00000410062 PTMSP20962 102 aa25.5■■□□□ 1.67
UBE2E3-202ENST00000410062 ASPAP45381 313 aa25.5■■□□□ 1.67
UBE2E3-202ENST00000410062 CT47A1Q5JQC4 288 aaPredicted RBP25.5■■□□□ 1.67
UBE2E3-202ENST00000410062 C11orf57Q6ZUT1 292 aaPredicted RBP25.5■■□□□ 1.67
UBE2E3-202ENST00000410062 RTL10Q7L3V2 364 aa25.5■■□□□ 1.67
UBE2E3-202ENST00000410062 CCDC150Q8NCX0 1101 aa25.5■■□□□ 1.67
UBE2E3-202ENST00000410062 PKMYT1Q99640 499 aa25.5■■□□□ 1.67
UBE2E3-202ENST00000410062 SYT15Q9BQS2 421 aa25.5■■□□□ 1.67
UBE2E3-202ENST00000410062 ABI2Q9NYB9 513 aaPredicted RBP25.5■■□□□ 1.67
UBE2E3-202ENST00000410062 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.5■■□□□ 1.67
UBE2E3-202ENST00000410062 DOCK6Q96HP0 2047 aa25.5■■□□□ 1.67
UBE2E3-202ENST00000410062 FAM163BP0C2L3 166 aa25.49■■□□□ 1.67
UBE2E3-202ENST00000410062 SP100P23497 879 aaPredicted RBP25.49■■□□□ 1.67
UBE2E3-202ENST00000410062 TWF1Q12792 350 aa25.49■■□□□ 1.67
UBE2E3-202ENST00000410062 HSP90AA4PQ58FG1 418 aa25.49■■□□□ 1.67
UBE2E3-202ENST00000410062 CYP26C1Q6V0L0 522 aa25.49■■□□□ 1.67
UBE2E3-202ENST00000410062 PHF7Q9BWX1 381 aaPredicted RBP25.49■■□□□ 1.67
UBE2E3-202ENST00000410062 RHOBTB2Q9BYZ6 727 aa25.49■■□□□ 1.67
UBE2E3-202ENST00000410062 CDH9Q9ULB4 789 aa25.49■■□□□ 1.67
UBE2E3-202ENST00000410062 COQ4Q9Y3A0 265 aa25.49■■□□□ 1.67
UBE2E3-202ENST00000410062 YIPF1Q9Y548 306 aa25.49■■□□□ 1.67
UBE2E3-202ENST00000410062 MYBPHLA2RUH7 354 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 A8MXQ7 604 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 XYLBO75191 536 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 SOAT2O75908 522 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 ZP2Q05996 745 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 KCNH2Q12809 1159 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 GRASPQ7Z6J2 395 aaPredicted RBP25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 ADHFE1Q8IWW8 467 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 UHRF1Q96T88 793 aaPredicted RBP25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 DPEP3Q9H4B8 488 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 THAP9Q9H5L6 903 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 HCFC1R1Q9NWW0 138 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 MUC3AQ02505 3323 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 TYRO3Q06418 890 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 SMARCB1Q12824 385 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 RPGRIP1Q96KN7 1286 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 SEPT5Q99719 369 aaPredicted RBP25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 LPIN3Q9BQK8 851 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 BCO2Q9BYV7 579 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 NIF3L1Q9GZT8 377 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 WDR6Q9NNW5 1121 aaKnown RBP25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 CRTAC1Q9NQ79 661 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 PRKAG3Q9UGI9 489 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 PCDHB5Q9Y5E4 795 aa25.48■■□□□ 1.67
UBE2E3-202ENST00000410062 NTHL1P78549 312 aa25.47■■□□□ 1.67
UBE2E3-202ENST00000410062 NFE2Q16621 373 aaPredicted RBP25.47■■□□□ 1.67
UBE2E3-202ENST00000410062 MGAT5BQ3V5L5 792 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms