RNA–Protein interactions for RNA: ENST00000409212.5

SH3BP4-203, Transcript of SH3 domain binding protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3BP4, Length 5,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-203ENST00000409212 NOA1Q8NC60 698 aaKnown RBP16.61■□□□□ 0.25
SH3BP4-203ENST00000409212 CGRRF1Q99675 332 aa16.61■□□□□ 0.25
SH3BP4-203ENST00000409212 CBWD1Q9BRT8 395 aa16.61■□□□□ 0.25
SH3BP4-203ENST00000409212 ZNF518BQ9C0D4 1074 aa16.61■□□□□ 0.25
SH3BP4-203ENST00000409212 SEMA6BQ9H3T3 888 aa16.61■□□□□ 0.25
SH3BP4-203ENST00000409212 CASS4Q9NQ75 786 aa16.61■□□□□ 0.25
SH3BP4-203ENST00000409212 OLFML3Q9NRN5 406 aa16.61■□□□□ 0.25
SH3BP4-203ENST00000409212 SLC2A3P11169 496 aa16.61■□□□□ 0.25
SH3BP4-203ENST00000409212 ERVK-24P63145 666 aa16.61■□□□□ 0.25
SH3BP4-203ENST00000409212 CYP4A22Q5TCH4 519 aa16.61■□□□□ 0.25
SH3BP4-203ENST00000409212 C4orf33Q8N1A6 199 aa16.61■□□□□ 0.25
SH3BP4-203ENST00000409212 RMDN2Q96LZ7 410 aa16.61■□□□□ 0.25
SH3BP4-203ENST00000409212 XPO6Q96QU8 1125 aaKnown RBP16.61■□□□□ 0.25
SH3BP4-203ENST00000409212 DBR1Q9UK59 544 aaKnown RBP16.61■□□□□ 0.25
SH3BP4-203ENST00000409212 RIMBP3CA6NJZ7 1639 aa16.61■□□□□ 0.25
SH3BP4-203ENST00000409212 RIMBP3BA6NNM3 1639 aa16.61■□□□□ 0.25
SH3BP4-203ENST00000409212 RIMBP3Q9UFD9 1639 aa16.61■□□□□ 0.25
SH3BP4-203ENST00000409212 PLEKP08567 350 aaPredicted RBP16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 MCF2P10911 925 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 HMOX2P30519 316 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 SHMT1P34896 483 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 CASP4P49662 377 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 CLCN3P51790 818 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 DNERQ8NFT8 737 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 TEX12Q9BXU0 123 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 CELF4Q9BZC1 486 aaKnown RBP16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 GOLPH3Q9H4A6 298 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 GPR182O15218 404 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 CUL3Q13618 768 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 CHSY1Q86X52 802 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 AGR3Q8TD06 166 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 N4BP2L2Q92802 583 aaPredicted RBP16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 CCT8L2Q96SF2 557 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 KIAA1683Q9H0B3 1180 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 SPATS2LQ9NUQ6 558 aaKnown RBP16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 BCL9O00512 1426 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 PRLRP16471 622 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 EEF1DP29692 281 aaKnown RBP16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 MUC3BQ9H195 1237 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 KDM4CQ9H3R0 1056 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 AGO4Q9HCK5 861 aaKnown RBP16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 USP15Q9Y4E8 981 aaPredicted RBP16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 GTPBP10A4D1E9 387 aaKnown RBP16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 NFIBO00712 420 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 SGPL1O95470 568 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 PYGLP06737 847 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 MFN1Q8IWA4 741 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 FAM163AQ96GL9 167 aaPredicted RBP16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 VPS33BQ9H267 617 aa16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 C20orf96Q9NUD7 363 aaPredicted RBP16.6■□□□□ 0.25
SH3BP4-203ENST00000409212 HARS2P49590 506 aaKnown RBP16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 HIC1Q14526 733 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 CDKAL1Q5VV42 579 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 HNRNPLLQ8WVV9 542 aaKnown RBP16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 TSR3Q9UJK0 312 aaKnown RBP16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 ZNF263O14978 683 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 EIF3HO15372 352 aaKnown RBP eCLIP16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 MEFVO15553 781 aaPredicted RBP16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 CYP11B1P15538 503 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 PTGER2P43116 358 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 NBPF12Q5TAG4 269 aaPredicted RBP16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 DDX42Q86XP3 938 aaKnown RBP eCLIP16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 ELMO2Q96JJ3 720 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 FAM118BQ9BPY3 351 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 MTMR12Q9C0I1 747 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 GRID1Q9ULK0 1009 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 SH3BP1Q9Y3L3 701 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 VGLL3A8MV65 326 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 TGFB3P10600 412 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 MAPTP10636 758 aaKnown RBP16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 PGM1P36871 562 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 POLE2P56282 527 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 METTL7BQ6UX53 244 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 COLEC11Q9BWP8 271 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 EPHB2P29323 1055 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 GTF2H3Q13889 308 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 ZNF473Q8WTR7 871 aaKnown RBP16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 TASP1Q9H6P5 420 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 PCMTD2Q9NV79 361 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 SNX5Q9Y5X3 404 aa16.59■□□□□ 0.25
SH3BP4-203ENST00000409212 MAP4P27816 1152 aaKnown RBP16.58■□□□□ 0.25
SH3BP4-203ENST00000409212 ALDH1A3P47895 512 aa16.58■□□□□ 0.25
SH3BP4-203ENST00000409212 MAPK7Q13164 816 aa16.58■□□□□ 0.25
SH3BP4-203ENST00000409212 TMEM259Q4ZIN3 620 aa16.58■□□□□ 0.25
SH3BP4-203ENST00000409212 SEZ6Q53EL9 994 aa16.58■□□□□ 0.25
SH3BP4-203ENST00000409212 DEFB132Q7Z7B7 95 aa16.58■□□□□ 0.25
SH3BP4-203ENST00000409212 LINC00523Q86TU6 105 aa16.58■□□□□ 0.25
SH3BP4-203ENST00000409212 FAM71DQ8N9W8 422 aa16.58■□□□□ 0.25
SH3BP4-203ENST00000409212 ARL8AQ96BM9 186 aa16.58■□□□□ 0.25
SH3BP4-203ENST00000409212 FOPNLQ96NB1 174 aa16.58■□□□□ 0.25
SH3BP4-203ENST00000409212 ZIM3Q96PE6 472 aa16.58■□□□□ 0.25
SH3BP4-203ENST00000409212 ADAM33Q9BZ11 813 aa16.58■□□□□ 0.25
SH3BP4-203ENST00000409212 PXDNQ92626 1479 aa16.58■□□□□ 0.25
SH3BP4-203ENST00000409212 COL3A1P02461 1466 aaPredicted RBP16.58■□□□□ 0.24
SH3BP4-203ENST00000409212 ANGPT2O15123 496 aa16.58■□□□□ 0.24
SH3BP4-203ENST00000409212 F9P00740 461 aa16.58■□□□□ 0.24
SH3BP4-203ENST00000409212 IL10P22301 178 aa16.58■□□□□ 0.24
SH3BP4-203ENST00000409212 FDFT1P37268 417 aa16.58■□□□□ 0.24
SH3BP4-203ENST00000409212 PRG3Q9Y2Y8 225 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms