RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 RPAP3Q9H6T3 665 aaPredicted RBP5.3□□□□□ -1.56
SSR1-202ENST00000397511 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.3□□□□□ -1.56
SSR1-202ENST00000397511 FEM1BQ9UK73 627 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 SH3GLB1Q9Y371 365 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 STK24Q9Y6E0 443 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 USH1CQ9Y6N9 552 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 NCANO14594 1321 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 PFASO15067 1338 aa5.3□□□□□ -1.56
SSR1-202ENST00000397511 LRRC37AA6NMS7 1700 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 LRRIQ4A6NIV6 560 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 BHMG1C9JSJ3 638 aaPredicted RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 GOLGA8SH3BPF8 625 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 GOLGA8MH3BSY2 632 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 RASGRF2O14827 1237 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 TCF4P15884 667 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 COILP38432 576 aaPredicted RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 APLP1P51693 650 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 HMGCS2P54868 508 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 CXCL9Q07325 125 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 FSTL1Q12841 308 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 ORC1Q13415 861 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 SNRNP48Q6IEG0 339 aaKnown RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 DPH6Q7L8W6 267 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 ZNF554Q86TJ5 538 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 FAM71AQ8IYT1 594 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 TMEM161BQ8NDZ6 487 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 HELQQ8TDG4 1101 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 C7orf43Q8WVR3 580 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 WDR60Q8WVS4 1066 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 GATA6Q92908 595 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 CATSPER2Q96P56 530 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 NR1H4Q96RI1 486 aaPredicted RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 RIT2Q99578 217 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 IL1RAPL1Q9NZN1 696 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 SAE1Q9UBE0 346 aaPredicted RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 MTRF1LQ9UGC7 380 aaKnown RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 MTUS1Q9ULD2 1270 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 ATRNL1Q5VV63 1379 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 PTPRJQ12913 1337 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 DOCK5Q9H7D0 1870 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 MAP3K7O43318 606 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 RIPK2O43353 540 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 ASLP04424 464 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 ZSCAN5DPP0CG00 497 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 RALAP11233 206 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 ETS1P14921 441 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 DPEP1P16444 411 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 HOXA7P31268 230 aaPredicted RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 CHRNA3P32297 505 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 PTGER2P43116 358 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 NLRP11P59045 1033 aaKnown RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 DYNLT1P63172 113 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 GTF2BQ00403 316 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 SPDYE2Q495Y8 402 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 LIN52Q52LA3 116 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 NBPF12Q5TAG4 269 aaPredicted RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 SNX30Q5VWJ9 437 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 KLC3Q6P597 504 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 B3GNT9Q6UX72 402 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 FAM47EQ6ZV65 393 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 NCCRP1Q6ZVX7 275 aaPredicted RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 ZBTB33Q86T24 672 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 CCDC60Q8IWA6 550 aaPredicted RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 TTLL6Q8N841 843 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 SUPT20HQ8NEM7 779 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 SCG3Q8WXD2 468 aaKnown RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 ZNF516Q92618 1163 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 SLC35B4Q969S0 331 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 FNBP1Q96RU3 617 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 PPP1R16BQ96T49 567 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 MPHOSPH6Q99547 160 aaKnown RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 PDCD2LQ9BRP1 358 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 TCHPQ9BT92 498 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 MRIQ9BWK5 157 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 STRA6Q9BX79 667 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 PRKAG3Q9UGI9 489 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 ITGB1BP2Q9UKP3 347 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 BARX2Q9UMQ3 279 aaPredicted RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 UMODL1Q5DID0 1318 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 ATAD5Q96QE3 1844 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 WDR64B1ANS9 1081 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 THAP12O43422 761 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 SUPT3HO75486 399 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 BANF1O75531 89 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 IFNB1P01574 187 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 NR3C2P08235 984 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 ITGA2BP08514 1039 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 MARK3P27448 753 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 PIK3CAP42336 1068 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 LIG4P49917 911 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 HSD17B4P51659 736 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 ITGA8P53708 1063 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 PSMC5P62195 406 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 CDR2Q01850 454 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 PLCB3Q01970 1234 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 RNASELQ05823 741 aaKnown RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 SULT2A1Q06520 285 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 ACVR2BQ13705 512 aa5.29□□□□□ -1.56
SSR1-202ENST00000397511 DHX34Q14147 1143 aaKnown RBP5.29□□□□□ -1.56
SSR1-202ENST00000397511 P3H1Q32P28 736 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms