RNA–Protein interactions for RNA: ENST00000392824.8

CSHL1-204, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSHL1, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-204ENST00000392824 WDR44Q5JSH3 913 aa17.24■□□□□ 0.35
CSHL1-204ENST00000392824 RBM43Q6ZSC3 357 aaKnown RBP17.24■□□□□ 0.35
CSHL1-204ENST00000392824 OSTM1Q86WC4 334 aa17.24■□□□□ 0.35
CSHL1-204ENST00000392824 ELMOD1Q8N336 334 aa17.24■□□□□ 0.35
CSHL1-204ENST00000392824 ATAD1Q8NBU5 361 aa17.24■□□□□ 0.35
CSHL1-204ENST00000392824 FBXL13Q8NEE6 735 aa17.24■□□□□ 0.35
CSHL1-204ENST00000392824 C2orf15Q8WU43 125 aaKnown RBP17.24■□□□□ 0.35
CSHL1-204ENST00000392824 KBTBD7Q8WVZ9 684 aa17.24■□□□□ 0.35
CSHL1-204ENST00000392824 ZNF707Q96C28 371 aaPredicted RBP17.24■□□□□ 0.35
CSHL1-204ENST00000392824 RPGRIP1Q96KN7 1286 aa17.24■□□□□ 0.35
CSHL1-204ENST00000392824 POMKQ9H5K3 350 aa17.24■□□□□ 0.35
CSHL1-204ENST00000392824 CDH22Q9UJ99 828 aa17.24■□□□□ 0.35
CSHL1-204ENST00000392824 INSL5Q9Y5Q6 135 aa17.24■□□□□ 0.35
CSHL1-204ENST00000392824 UNC80Q8N2C7 3258 aa17.23■□□□□ 0.35
CSHL1-204ENST00000392824 MTMR11A4FU01 709 aa17.23■□□□□ 0.35
CSHL1-204ENST00000392824 ASS1P00966 412 aaKnown RBP17.23■□□□□ 0.35
CSHL1-204ENST00000392824 ALDH1A3P47895 512 aa17.23■□□□□ 0.35
CSHL1-204ENST00000392824 TUFMP49411 452 aaKnown RBP17.23■□□□□ 0.35
CSHL1-204ENST00000392824 CETN1Q12798 172 aa17.23■□□□□ 0.35
CSHL1-204ENST00000392824 PLD1Q13393 1074 aa17.23■□□□□ 0.35
CSHL1-204ENST00000392824 INTS6LQ5JSJ4 861 aaKnown RBP17.23■□□□□ 0.35
CSHL1-204ENST00000392824 IQCEQ6IPM2 695 aa17.23■□□□□ 0.35
CSHL1-204ENST00000392824 SCARA5Q6ZMJ2 495 aa17.23■□□□□ 0.35
CSHL1-204ENST00000392824 LRRTM3Q86VH5 581 aa17.23■□□□□ 0.35
CSHL1-204ENST00000392824 SPPL2BQ8TCT7 592 aa17.23■□□□□ 0.35
CSHL1-204ENST00000392824 SLC35C1Q96A29 364 aa17.23■□□□□ 0.35
CSHL1-204ENST00000392824 MRPL45Q9BRJ2 306 aaKnown RBP17.23■□□□□ 0.35
CSHL1-204ENST00000392824 PI4K2AQ9BTU6 479 aa17.23■□□□□ 0.35
CSHL1-204ENST00000392824 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.23■□□□□ 0.35
CSHL1-204ENST00000392824 ANO10Q9NW15 660 aa17.23■□□□□ 0.35
CSHL1-204ENST00000392824 RAB20Q9NX57 234 aa17.23■□□□□ 0.35
CSHL1-204ENST00000392824 CDH9Q9ULB4 789 aa17.23■□□□□ 0.35
CSHL1-204ENST00000392824 SLC27A5Q9Y2P5 690 aa17.23■□□□□ 0.35
CSHL1-204ENST00000392824 NR2E1Q9Y466 385 aa17.23■□□□□ 0.35
CSHL1-204ENST00000392824 PCDHB5Q9Y5E4 795 aa17.23■□□□□ 0.35
CSHL1-204ENST00000392824 A8MXQ7 604 aa17.22■□□□□ 0.35
CSHL1-204ENST00000392824 N4BP1O75113 896 aaKnown RBP17.22■□□□□ 0.35
CSHL1-204ENST00000392824 PAPLNO95428 1278 aa17.22■□□□□ 0.35
CSHL1-204ENST00000392824 POU2F2P09086 479 aa17.22■□□□□ 0.35
CSHL1-204ENST00000392824 LMO2P25791 158 aa17.22■□□□□ 0.35
CSHL1-204ENST00000392824 EPHB3P54753 998 aa17.22■□□□□ 0.35
CSHL1-204ENST00000392824 ZP2Q05996 745 aa17.22■□□□□ 0.35
CSHL1-204ENST00000392824 TWF1Q12792 350 aa17.22■□□□□ 0.35
CSHL1-204ENST00000392824 MAPRE1Q15691 268 aaKnown RBP17.22■□□□□ 0.35
CSHL1-204ENST00000392824 SPOPLQ6IQ16 392 aa17.22■□□□□ 0.35
CSHL1-204ENST00000392824 CAVIN1Q6NZI2 390 aaKnown RBP17.22■□□□□ 0.35
CSHL1-204ENST00000392824 GRASPQ7Z6J2 395 aaPredicted RBP17.22■□□□□ 0.35
CSHL1-204ENST00000392824 GJD3Q8N144 294 aa17.22■□□□□ 0.35
CSHL1-204ENST00000392824 ELMO3Q96BJ8 720 aa17.22■□□□□ 0.35
CSHL1-204ENST00000392824 ZNF512Q96ME7 567 aaPredicted RBP17.22■□□□□ 0.35
CSHL1-204ENST00000392824 NECAB3Q96P71 396 aaPredicted RBP17.22■□□□□ 0.35
CSHL1-204ENST00000392824 SEPT5Q99719 369 aaPredicted RBP17.22■□□□□ 0.35
CSHL1-204ENST00000392824 SYT15Q9BQS2 421 aa17.22■□□□□ 0.35
CSHL1-204ENST00000392824 SMYD3Q9H7B4 428 aa17.22■□□□□ 0.35
CSHL1-204ENST00000392824 WDR6Q9NNW5 1121 aaKnown RBP17.22■□□□□ 0.35
CSHL1-204ENST00000392824 ABI2Q9NYB9 513 aaPredicted RBP17.22■□□□□ 0.35
CSHL1-204ENST00000392824 HSFX1Q9UBD0 423 aa17.22■□□□□ 0.35
CSHL1-204ENST00000392824 GTF3C4Q9UKN8 822 aa17.22■□□□□ 0.35
CSHL1-204ENST00000392824 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.22■□□□□ 0.35
CSHL1-204ENST00000392824 PTPN2P17706 415 aa17.21■□□□□ 0.35
CSHL1-204ENST00000392824 TRIM21P19474 475 aaKnown RBP17.21■□□□□ 0.35
CSHL1-204ENST00000392824 FMO5P49326 533 aa17.21■□□□□ 0.35
CSHL1-204ENST00000392824 CDR1P51861 262 aa17.21■□□□□ 0.35
CSHL1-204ENST00000392824 CDH8P55286 799 aa17.21■□□□□ 0.35
CSHL1-204ENST00000392824 MARSP56192 900 aaKnown RBP17.21■□□□□ 0.35
CSHL1-204ENST00000392824 NOP14P78316 857 aaKnown RBP17.21■□□□□ 0.35
CSHL1-204ENST00000392824 MGAT5BQ3V5L5 792 aa17.21■□□□□ 0.35
CSHL1-204ENST00000392824 CBWD6Q4V339 395 aa17.21■□□□□ 0.35
CSHL1-204ENST00000392824 CBWD3Q5JTY5 395 aa17.21■□□□□ 0.35
CSHL1-204ENST00000392824 CBWD5Q5RIA9 395 aa17.21■□□□□ 0.35
CSHL1-204ENST00000392824 OTOP3Q7RTS5 596 aa17.21■□□□□ 0.35
CSHL1-204ENST00000392824 SPATA2LQ8IUW3 424 aaPredicted RBP17.21■□□□□ 0.35
CSHL1-204ENST00000392824 FAM114A1Q8IWE2 563 aa17.21■□□□□ 0.35
CSHL1-204ENST00000392824 TRIM59Q8IWR1 403 aa17.21■□□□□ 0.35
CSHL1-204ENST00000392824 FEZF2Q8TBJ5 459 aa17.21■□□□□ 0.35
CSHL1-204ENST00000392824 ACSF2Q96CM8 615 aaPredicted RBP17.21■□□□□ 0.35
CSHL1-204ENST00000392824 MED15Q96RN5 788 aa17.21■□□□□ 0.35
CSHL1-204ENST00000392824 TMEM63CQ9P1W3 806 aa17.21■□□□□ 0.35
CSHL1-204ENST00000392824 MAGEC2Q9UBF1 373 aaPredicted RBP17.21■□□□□ 0.35
CSHL1-204ENST00000392824 YIPF1Q9Y548 306 aa17.21■□□□□ 0.35
CSHL1-204ENST00000392824 TTC28Q96AY4 2481 aa17.2■□□□□ 0.34
CSHL1-204ENST00000392824 MYBPHLA2RUH7 354 aa17.2■□□□□ 0.34
CSHL1-204ENST00000392824 HCRTO43612 131 aa17.2■□□□□ 0.34
CSHL1-204ENST00000392824 VNN2O95498 520 aa17.2■□□□□ 0.34
CSHL1-204ENST00000392824 SP100P23497 879 aaPredicted RBP17.2■□□□□ 0.34
CSHL1-204ENST00000392824 RAP1GAPP47736 663 aa17.2■□□□□ 0.34
CSHL1-204ENST00000392824 KCNH2Q12809 1159 aa17.2■□□□□ 0.34
CSHL1-204ENST00000392824 STX1AQ16623 288 aa17.2■□□□□ 0.34
CSHL1-204ENST00000392824 C4orf50Q6ZRC1 276 aa17.2■□□□□ 0.34
CSHL1-204ENST00000392824 FAM200AQ8TCP9 573 aa17.2■□□□□ 0.34
CSHL1-204ENST00000392824 SEMA4DQ92854 862 aa17.2■□□□□ 0.34
CSHL1-204ENST00000392824 FAXDC2Q96IV6 333 aa17.2■□□□□ 0.34
CSHL1-204ENST00000392824 CNOT6LQ96LI5 555 aaKnown RBP17.2■□□□□ 0.34
CSHL1-204ENST00000392824 COL25A1Q9BXS0 654 aaPredicted RBP17.2■□□□□ 0.34
CSHL1-204ENST00000392824 DNAI2Q9GZS0 605 aa17.2■□□□□ 0.34
CSHL1-204ENST00000392824 NIF3L1Q9GZT8 377 aa17.2■□□□□ 0.34
CSHL1-204ENST00000392824 CRISPLD1Q9H336 500 aa17.2■□□□□ 0.34
CSHL1-204ENST00000392824 THAP9Q9H5L6 903 aa17.2■□□□□ 0.34
CSHL1-204ENST00000392824 CYP3A43Q9HB55 503 aa17.2■□□□□ 0.34
CSHL1-204ENST00000392824 APOBEC3GQ9HC16 384 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms