RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 TULP2O00295 520 aa13.32□□□□□ -0.28
DNMT3A-204ENST00000380756 MAPTP10636 758 aaKnown RBP13.32□□□□□ -0.28
DNMT3A-204ENST00000380756 RBP5P82980 135 aa13.32□□□□□ -0.28
DNMT3A-204ENST00000380756 ERMARDQ5T6L9 678 aa13.32□□□□□ -0.28
DNMT3A-204ENST00000380756 SLC30A9Q6PML9 568 aa13.32□□□□□ -0.28
DNMT3A-204ENST00000380756 LNX1Q8TBB1 728 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-204ENST00000380756 PARD3BQ8TEW8 1205 aa13.32□□□□□ -0.28
DNMT3A-204ENST00000380756 RNF139Q8WU17 664 aa13.32□□□□□ -0.28
DNMT3A-204ENST00000380756 ATP6V1E2Q96A05 226 aa13.32□□□□□ -0.28
DNMT3A-204ENST00000380756 OLFM3Q96PB7 478 aa13.32□□□□□ -0.28
DNMT3A-204ENST00000380756 ADA2Q9NZK5 511 aa13.32□□□□□ -0.28
DNMT3A-204ENST00000380756 DLGAP2Q9P1A6 1054 aa13.32□□□□□ -0.28
DNMT3A-204ENST00000380756 ASTN1O14525 1302 aa13.32□□□□□ -0.28
DNMT3A-204ENST00000380756 GAKO14976 1311 aa13.32□□□□□ -0.28
DNMT3A-204ENST00000380756 MEIS2O14770 477 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 ATP9BO43861 1147 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 SHBGP04278 402 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 PAMP19021 973 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 OTUD4Q01804 1114 aaKnown RBP13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 POU5F1BQ06416 359 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 MED21Q13503 144 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 STILQ15468 1287 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 FBXO36Q8NEA4 188 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 ACTL9Q8TC94 416 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 EPS8L1Q8TE68 723 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 PURBQ96QR8 312 aaKnown RBP13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 SH3GL2Q99962 352 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 FRMD8Q9BZ67 464 aaPredicted RBP13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 ANLNQ9NQW6 1124 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 METTL5Q9NRN9 209 aaKnown RBP13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 GEMIN8Q9NWZ8 242 aaKnown RBP13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 BAG5Q9UL15 447 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 L3MBTL1Q9Y468 752 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 VHLP40337 213 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 PPP3CAQ08209 521 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 NME3Q13232 169 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 PCNX4Q63HM2 1172 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 APOBEC3HQ6NTF7 200 aaKnown RBP13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 KIRREL3Q8IZU9 778 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 HES6Q96HZ4 224 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 AGAP3Q96P47 875 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 SLC24A2Q9UI40 661 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 SALL4Q9UJQ4 1053 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 RBAK-RBAKDNI3L0D1 243 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 DRG2P55039 364 aaKnown RBP13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 ECM1Q16610 540 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 MROH9Q5TGP6 573 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 LRRC71Q8N4P6 559 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 C2orf69Q8N8R5 385 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 PRELID2Q8N945 189 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 EXT2Q93063 718 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 CENPTQ96BT3 561 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 AP5M1Q9H0R1 490 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 PPP1R12AO14974 1030 aaPredicted RBP13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 SLC4A1P02730 911 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 RCN1Q15293 331 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 CHI3L2Q15782 390 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 RARS2Q5T160 578 aaKnown RBP13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 FAXCQ5TGI0 409 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 TTC39BQ5VTQ0 682 aaPredicted RBP13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 CDR2LQ86X02 465 aaPredicted RBP13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 MYLK4Q86YV6 388 aaPredicted RBP13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 RNF168Q8IYW5 571 aaPredicted RBP13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 CLMNQ96JQ2 1002 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 PAFAH2Q99487 392 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 CHST7Q9NS84 486 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 NINJ2Q9NZG7 142 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 FNDC3AQ9Y2H6 1198 aaKnown RBP13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 UBR1Q8IWV7 1749 aa13.31□□□□□ -0.28
DNMT3A-204ENST00000380756 TISP43B9A030 160 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 LCP1P13796 627 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 PMLP29590 882 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 IRX1P78414 480 aaPredicted RBP13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 GCNT1Q02742 428 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 ATF7IP2Q5U623 682 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 ITPRIPL1Q6GPH6 555 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 SPOCD1Q6ZMY3 1216 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 RSPH3Q86UC2 560 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 ABRAQ8N0Z2 381 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 SCG3Q8WXD2 468 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 ABTB1Q969K4 478 aaPredicted RBP13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 ELMO3Q96BJ8 720 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 PDCD2LQ9BRP1 358 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 FSD1LQ9BXM9 530 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 DCLRE1BQ9H816 532 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 GRID1Q9ULK0 1009 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 CYP3A7-CYP3A51PA0A087WV96 503 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 PIK3CDO00329 1044 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 GPD1P21695 349 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 CYP3A7P24462 503 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 EEF1B2P24534 225 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 MARSP56192 900 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 DYNC1I2Q13409 638 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 TMEM132DQ14C87 1099 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 KIF19Q2TAC6 998 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 BOLA3Q53S33 107 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 IER5Q5VY09 327 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 DUPD1Q68J44 220 aa13.3□□□□□ -0.28
DNMT3A-204ENST00000380756 ZFPM1Q8IX07 1006 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms