RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 RIPOR3Q96MK2 946 aa17.11■□□□□ 0.33
HDHD3-202ENST00000374180 MRPL45Q9BRJ2 306 aaKnown RBP17.11■□□□□ 0.33
HDHD3-202ENST00000374180 PRKD2Q9BZL6 878 aa17.11■□□□□ 0.33
HDHD3-202ENST00000374180 PIDD1Q9HB75 910 aa17.11■□□□□ 0.33
HDHD3-202ENST00000374180 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.11■□□□□ 0.332e-6■■■■■ 149.1
HDHD3-202ENST00000374180 RAB20Q9NX57 234 aa17.11■□□□□ 0.33
HDHD3-202ENST00000374180 PDGFRBP09619 1106 aa17.1■□□□□ 0.33
HDHD3-202ENST00000374180 ACAT1P24752 427 aaKnown RBP17.1■□□□□ 0.33
HDHD3-202ENST00000374180 HOXA9P31269 272 aa17.1■□□□□ 0.33
HDHD3-202ENST00000374180 MTHFRP42898 656 aa17.1■□□□□ 0.33
HDHD3-202ENST00000374180 SMARCB1Q12824 385 aa17.1■□□□□ 0.33
HDHD3-202ENST00000374180 CBX2Q14781 532 aaPredicted RBP17.1■□□□□ 0.33
HDHD3-202ENST00000374180 SPOPLQ6IQ16 392 aa17.1■□□□□ 0.33
HDHD3-202ENST00000374180 LRRTM3Q86VH5 581 aa17.1■□□□□ 0.33
HDHD3-202ENST00000374180 OR6B3Q8NGW1 331 aa17.1■□□□□ 0.33
HDHD3-202ENST00000374180 SMG7Q92540 1137 aaKnown RBP17.1■□□□□ 0.33
HDHD3-202ENST00000374180 SEMA4DQ92854 862 aa17.1■□□□□ 0.33
HDHD3-202ENST00000374180 CNOT6LQ96LI5 555 aaKnown RBP17.1■□□□□ 0.33
HDHD3-202ENST00000374180 NECTIN4Q96NY8 510 aa17.1■□□□□ 0.33
HDHD3-202ENST00000374180 SMYD3Q9H7B4 428 aa17.1■□□□□ 0.33
HDHD3-202ENST00000374180 CDH22Q9UJ99 828 aa17.1■□□□□ 0.33
HDHD3-202ENST00000374180 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.1■□□□□ 0.33
HDHD3-202ENST00000374180 MTCL1Q9Y4B5 1905 aaKnown RBP17.1■□□□□ 0.33
HDHD3-202ENST00000374180 XYLBO75191 536 aa17.09■□□□□ 0.33
HDHD3-202ENST00000374180 LMO2P25791 158 aa17.09■□□□□ 0.33
HDHD3-202ENST00000374180 FMO5P49326 533 aa17.09■□□□□ 0.33
HDHD3-202ENST00000374180 CDH8P55286 799 aa17.09■□□□□ 0.33
HDHD3-202ENST00000374180 NOP14P78316 857 aaKnown RBP17.09■□□□□ 0.33
HDHD3-202ENST00000374180 DUSP4Q13115 394 aa17.09■□□□□ 0.33
HDHD3-202ENST00000374180 SKOR2Q2VWA4 1001 aaPredicted RBP17.09■□□□□ 0.33
HDHD3-202ENST00000374180 WDR44Q5JSH3 913 aa17.09■□□□□ 0.33
HDHD3-202ENST00000374180 SCARA5Q6ZMJ2 495 aa17.09■□□□□ 0.33
HDHD3-202ENST00000374180 IRF2BP1Q8IU81 584 aa17.09■□□□□ 0.33
HDHD3-202ENST00000374180 ATAD1Q8NBU5 361 aa17.09■□□□□ 0.33
HDHD3-202ENST00000374180 FEZF2Q8TBJ5 459 aa17.09■□□□□ 0.33
HDHD3-202ENST00000374180 ZNF707Q96C28 371 aaPredicted RBP17.09■□□□□ 0.33
HDHD3-202ENST00000374180 THAP9Q9H5L6 903 aa17.09■□□□□ 0.33
HDHD3-202ENST00000374180 COQ4Q9Y3A0 265 aa17.09■□□□□ 0.33
HDHD3-202ENST00000374180 MTMR11A4FU01 709 aa17.08■□□□□ 0.32
HDHD3-202ENST00000374180 CCL16O15467 120 aa17.08■□□□□ 0.32
HDHD3-202ENST00000374180 HCRTO43612 131 aa17.08■□□□□ 0.32
HDHD3-202ENST00000374180 N4BP1O75113 896 aaKnown RBP17.08■□□□□ 0.32
HDHD3-202ENST00000374180 LRRN2O75325 713 aa17.08■□□□□ 0.32
HDHD3-202ENST00000374180 LETM1O95202 739 aaPredicted RBP17.08■□□□□ 0.32
HDHD3-202ENST00000374180 PAPLNO95428 1278 aa17.08■□□□□ 0.32
HDHD3-202ENST00000374180 VNN2O95498 520 aa17.08■□□□□ 0.32
HDHD3-202ENST00000374180 LRG1P02750 347 aa17.08■□□□□ 0.32
HDHD3-202ENST00000374180 CDR1P51861 262 aa17.08■□□□□ 0.32
HDHD3-202ENST00000374180 TYRO3Q06418 890 aa17.08■□□□□ 0.32
HDHD3-202ENST00000374180 CETN1Q12798 172 aa17.08■□□□□ 0.32
HDHD3-202ENST00000374180 KCNH2Q12809 1159 aa17.08■□□□□ 0.32
HDHD3-202ENST00000374180 NFE2Q16621 373 aaPredicted RBP17.08■□□□□ 0.32
HDHD3-202ENST00000374180 INTS6LQ5JSJ4 861 aaKnown RBP17.08■□□□□ 0.32
HDHD3-202ENST00000374180 FAM114A1Q8IWE2 563 aa17.08■□□□□ 0.32
HDHD3-202ENST00000374180 ENOX1Q8TC92 643 aaKnown RBP17.08■□□□□ 0.32
HDHD3-202ENST00000374180 C2orf15Q8WU43 125 aaKnown RBP17.08■□□□□ 0.32
HDHD3-202ENST00000374180 RHOBTB2Q9BYZ6 727 aa17.08■□□□□ 0.32
HDHD3-202ENST00000374180 GTF3C4Q9UKN8 822 aa17.08■□□□□ 0.32
HDHD3-202ENST00000374180 CDH9Q9ULB4 789 aa17.08■□□□□ 0.32
HDHD3-202ENST00000374180 SLC27A5Q9Y2P5 690 aa17.08■□□□□ 0.32
HDHD3-202ENST00000374180 INSL5Q9Y5Q6 135 aa17.08■□□□□ 0.32
HDHD3-202ENST00000374180 TTC28Q96AY4 2481 aa17.08■□□□□ 0.32
HDHD3-202ENST00000374180 A8MXQ7 604 aa17.07■□□□□ 0.32
HDHD3-202ENST00000374180 PMM2O15305 246 aa17.07■□□□□ 0.32
HDHD3-202ENST00000374180 ATP2C2O75185 946 aa17.07■□□□□ 0.32
HDHD3-202ENST00000374180 AFPP02771 609 aaKnown RBP17.07■□□□□ 0.32
HDHD3-202ENST00000374180 MTIF2P46199 727 aaKnown RBP17.07■□□□□ 0.32
HDHD3-202ENST00000374180 RAP1GAPP47736 663 aa17.07■□□□□ 0.32
HDHD3-202ENST00000374180 SYT15Q9BQS2 421 aa17.07■□□□□ 0.32
HDHD3-202ENST00000374180 NIF3L1Q9GZT8 377 aa17.07■□□□□ 0.32
HDHD3-202ENST00000374180 SDCBP2Q9H190 292 aa17.07■□□□□ 0.32
HDHD3-202ENST00000374180 APOBEC3GQ9HC16 384 aaKnown RBP17.07■□□□□ 0.32
HDHD3-202ENST00000374180 TMLHEQ9NVH6 421 aa17.07■□□□□ 0.32
HDHD3-202ENST00000374180 ABI2Q9NYB9 513 aaPredicted RBP17.07■□□□□ 0.32
HDHD3-202ENST00000374180 HSFX1Q9UBD0 423 aa17.07■□□□□ 0.32
HDHD3-202ENST00000374180 MAGEC2Q9UBF1 373 aaPredicted RBP17.07■□□□□ 0.32
HDHD3-202ENST00000374180 PRKAG3Q9UGI9 489 aa17.07■□□□□ 0.32
HDHD3-202ENST00000374180 PCDHB5Q9Y5E4 795 aa17.07■□□□□ 0.32
HDHD3-202ENST00000374180 TSC2P49815 1807 aa17.07■□□□□ 0.32
HDHD3-202ENST00000374180 NCOR1O75376 2440 aa17.07■□□□□ 0.32
HDHD3-202ENST00000374180 TCF20Q9UGU0 1960 aaKnown RBP17.06■□□□□ 0.32
HDHD3-202ENST00000374180 MYBPHLA2RUH7 354 aa17.06■□□□□ 0.32
HDHD3-202ENST00000374180 P4HA2O15460 535 aa17.06■□□□□ 0.32
HDHD3-202ENST00000374180 ASPAP45381 313 aa17.06■□□□□ 0.32
HDHD3-202ENST00000374180 ALDH1A3P47895 512 aa17.06■□□□□ 0.32
HDHD3-202ENST00000374180 TUFMP49411 452 aaKnown RBP17.06■□□□□ 0.32
HDHD3-202ENST00000374180 PSMC1P62191 440 aaKnown RBP17.06■□□□□ 0.32
HDHD3-202ENST00000374180 MAPRE1Q15691 268 aaKnown RBP17.06■□□□□ 0.32
HDHD3-202ENST00000374180 HSP90AA4PQ58FG1 418 aa17.06■□□□□ 0.32
HDHD3-202ENST00000374180 C11orf57Q6ZUT1 292 aaPredicted RBP17.06■□□□□ 0.32
HDHD3-202ENST00000374180 SPPL2BQ8TCT7 592 aa17.06■□□□□ 0.32
HDHD3-202ENST00000374180 ADAMTS19Q8TE59 1207 aa17.06■□□□□ 0.32
HDHD3-202ENST00000374180 FAXDC2Q96IV6 333 aa17.06■□□□□ 0.32
HDHD3-202ENST00000374180 PHF7Q9BWX1 381 aaPredicted RBP17.06■□□□□ 0.32
HDHD3-202ENST00000374180 BCO2Q9BYV7 579 aa17.06■□□□□ 0.32
HDHD3-202ENST00000374180 DNAJC25Q9H1X3 360 aa17.06■□□□□ 0.32
HDHD3-202ENST00000374180 CRISPLD1Q9H336 500 aa17.06■□□□□ 0.32
HDHD3-202ENST00000374180 POMKQ9H5K3 350 aa17.06■□□□□ 0.32
HDHD3-202ENST00000374180 CYP3A43Q9HB55 503 aa17.06■□□□□ 0.32
HDHD3-202ENST00000374180 NFE2L3Q9Y4A8 694 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms