RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 KRT84Q9NSB2 600 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 ERVV-1B6SEH8 477 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 CTSHP09668 335 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 PSMD7P51665 324 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 ST8SIA6P61647 398 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 OTUD4Q01804 1114 aaKnown RBP16.7■□□□□ 0.26
COL18A1-203ENST00000359759 MFSD4BQ5TF39 518 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 GRID1Q9ULK0 1009 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 ABCA5Q8WWZ7 1642 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 F5H6K3 240 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 AP3M2P53677 418 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 KLRC3Q07444 240 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 GOLGA7BQ2TAP0 167 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 RASGRP2Q7LDG7 609 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 OR6J1Q8NGC5 347 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 CALML6Q8TD86 181 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 SIKE1Q9BRV8 207 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 RARBP10826 455 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 GEMIN4P57678 1058 aaKnown RBP16.7■□□□□ 0.26
COL18A1-203ENST00000359759 TMEM132DQ14C87 1099 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 ZC2HC1CQ53FD0 456 aaPredicted RBP16.7■□□□□ 0.26
COL18A1-203ENST00000359759 PPP1R14AQ96A00 147 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 TADA1Q96BN2 335 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 FAM136AQ96C01 138 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 FBXO40Q9UH90 709 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 PHTF1Q9UMS5 762 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
COL18A1-203ENST00000359759 SLC16A3O15427 465 aaKnown RBP16.69■□□□□ 0.26
COL18A1-203ENST00000359759 TADA2AO75478 443 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 UCHL3P15374 230 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 ARID3BQ8IVW6 561 aaPredicted RBP16.69■□□□□ 0.26
COL18A1-203ENST00000359759 SRBD1Q8N5C6 995 aaKnown RBP16.69■□□□□ 0.26
COL18A1-203ENST00000359759 EPS8L3Q8TE67 593 aaKnown RBP16.69■□□□□ 0.26
COL18A1-203ENST00000359759 PIGBQ92521 554 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 KCTD10Q9H3F6 313 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 APPL1Q9UKG1 709 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 MINPP1Q9UNW1 487 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 SRGNP10124 158 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 UGP2Q16851 508 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 PLEKHA7Q6IQ23 1121 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 BHMTQ93088 406 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 GPR63Q9BZJ6 419 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 PCDHB8Q9UN66 801 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 SNX13Q9Y5W8 968 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 CDY2AQ9Y6F7 541 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 CDY1Q9Y6F8 540 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 AP3B1O00203 1094 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 UPP2O95045 317 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 POU1F1P28069 291 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 IRAK1P51617 712 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 COG2Q14746 738 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 RIC8BQ9NVN3 520 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.69■□□□□ 0.264e-7■■■■□ 21.4
COL18A1-203ENST00000359759 HEY2Q9UBP5 337 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 RUVBL2Q9Y230 463 aaKnown RBP16.69■□□□□ 0.26
COL18A1-203ENST00000359759 NFIL3Q16649 462 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 DCAF6Q58WW2 860 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 SPRTNQ9H040 489 aaPredicted RBP16.69■□□□□ 0.26
COL18A1-203ENST00000359759 JPH1Q9HDC5 661 aaPredicted RBP16.69■□□□□ 0.26
COL18A1-203ENST00000359759 MROH7-TTC4A0A0A0MT08 1334 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 SHANK2Q9UPX8 1470 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 A0A1B0GTH6 734 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 PRIM2P49643 509 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 RBBP8Q99708 897 aa16.69■□□□□ 0.26
COL18A1-203ENST00000359759 PDZK1P1A8MUH7 402 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 PDXKO00764 312 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 ALDH1A1P00352 501 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 FEN1P39748 380 aaKnown RBP16.68■□□□□ 0.26
COL18A1-203ENST00000359759 CSTF3Q12996 717 aaKnown RBP16.68■□□□□ 0.26
COL18A1-203ENST00000359759 CYB5D1Q6P9G0 228 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 RTKN2Q8IZC4 609 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 TTC39CQ8N584 583 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 ZNF669Q96BR6 464 aaPredicted RBP16.68■□□□□ 0.26
COL18A1-203ENST00000359759 INTS13Q9NVM9 706 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 PSMC3P17980 439 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 TMC5Q6UXY8 1006 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 DENND5BQ6ZUT9 1274 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 C2orf69Q8N8R5 385 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 MASTLQ96GX5 879 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 SMARCAD1Q9H4L7 1026 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 UVRAGQ9P2Y5 699 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 SNRNP35Q16560 246 aaKnown RBP16.68■□□□□ 0.26
COL18A1-203ENST00000359759 MED15Q96RN5 788 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 SYBUQ9NX95 663 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 WWOXQ9NZC7 414 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 PAK5Q9P286 719 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 PCDHA10Q9Y5I2 948 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 CPDO75976 1380 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 ATP6V1B2P21281 511 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 NUP62P37198 522 aaPredicted RBP16.68■□□□□ 0.26
COL18A1-203ENST00000359759 BFSP2Q13515 415 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 CYP51A1Q16850 503 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 RAD9BQ6WBX8 426 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 OMA1Q96E52 524 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 SPATA2Q9UM82 520 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 CST8O60676 142 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 SARSP49591 514 aaKnown RBP16.68■□□□□ 0.26
COL18A1-203ENST00000359759 DPYDQ12882 1025 aa16.68■□□□□ 0.26
COL18A1-203ENST00000359759 DDX39BQ13838 428 aaKnown RBP16.68■□□□□ 0.26
COL18A1-203ENST00000359759 SPATA16Q9BXB7 569 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms