RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 KRT14P02533 472 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 ACRP10323 421 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 ARID5BQ14865 1188 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 PWP2Q15269 919 aaKnown RBP17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 KLHL38Q2WGJ6 581 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 TRIM59Q8IWR1 403 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 CNPY4Q8N129 248 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 C7orf43Q8WVR3 580 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 NT5C1B-RDH14C9J2C7 533 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 KPNA1P52294 538 aaPredicted RBP17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 CIPCQ9C0C6 399 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 C11orf49Q9H6J7 331 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 HPSEQ9Y251 543 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 SPATA31C2B4DYI2 1134 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 HGSO14964 777 aaPredicted RBP17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 ATP8B1O43520 1251 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 ACAT1P24752 427 aaKnown RBP17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 BCAT1P54687 386 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 TMEM119Q4V9L6 283 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 SNX24Q9Y343 169 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 TLL2Q9Y6L7 1015 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 FRMPD4Q14CM0 1322 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 C3orf70A6NLC5 250 aaPredicted RBP17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 E5RI56 91 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 ADCY2Q08462 1091 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 C6orf118Q5T5N4 469 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 SPATA24Q86W54 205 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 MSL3Q8N5Y2 521 aaKnown RBP17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 CFAP69A5D8W1 941 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 ZMYND10O75800 440 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 F9P00740 461 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 GPS1Q13098 491 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 EMBQ6PCB8 327 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 CDK5RAP1Q96SZ6 601 aaKnown RBP17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 DDX43Q9NXZ2 648 aaKnown RBP17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 ARHGAP25P42331 645 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 LPPQ93052 612 aa17.2■□□□□ 0.34
SMARCA4-201ENST00000344626 SHPRHQ149N8 1683 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 FGRP09769 529 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 TMEM253P0C7T8 217 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 NUMBP49757 651 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 KDELC2Q7Z4H8 507 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 TTC8Q8TAM2 541 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 POP1Q99575 1024 aaKnown RBP17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 ZNF518BQ9C0D4 1074 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 FAM50BQ9Y247 325 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 H0Y626 953 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 GNGT1P63211 74 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 RBBP5Q15291 538 aaKnown RBP17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 ALS2CLQ60I27 953 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 CYFIP2Q96F07 1278 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 CYP3A7-CYP3A51PA0A087WV96 503 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 SNX2O60749 519 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 CYP3A7P24462 503 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 P3H1Q32P28 736 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 MAP3K21Q5TCX8 1036 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 SYDE1Q6ZW31 735 aaPredicted RBP17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 PPTC7Q8NI37 304 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 ARNTL2Q8WYA1 636 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 PCDHB5Q9Y5E4 795 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 FOXP2O15409 715 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 MMP3P08254 477 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 PDK1Q15118 436 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 NOMO2Q5JPE7 1267 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 TAS2R42Q7RTR8 314 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 ZC3H18Q86VM9 953 aaKnown RBP17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 FEZF2Q8TBJ5 459 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 DDI1Q8WTU0 396 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 DCUN1D1Q96GG9 259 aa17.19■□□□□ 0.34
SMARCA4-201ENST00000344626 DHX34Q14147 1143 aaKnown RBP17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 MMEL1Q495T6 779 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 MTHFD1LQ6UB35 978 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 CACNA2D3Q8IZS8 1091 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 MTSS1O43312 755 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 GTF2H3Q13889 308 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 SCFD1Q8WVM8 642 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 KRT35Q92764 455 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 SNF8Q96H20 258 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 TMEM134Q9H6X4 195 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 TLE6Q9H808 572 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 UNCXA6NJT0 531 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 EFCAB14O75071 495 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 MDH1BQ5I0G3 518 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 EARS2Q5JPH6 523 aaKnown RBP17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 JADE1Q6IE81 842 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 CCDC137Q6PK04 289 aaKnown RBP17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 RAB42Q8N4Z0 105 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 ZNF507Q8TCN5 953 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 RPRD1AQ96P16 312 aaPredicted RBP17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 GMLQ99445 158 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 TSSK1BQ9BXA7 367 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 VCXQ9H320 206 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 DNAJC18Q9H819 358 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 DDIT4Q9NX09 232 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 EFEMP1Q12805 493 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 BOLA3Q53S33 107 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 LRRC8DQ7L1W4 858 aa17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 PPHLN1Q8NEY8 458 aaKnown RBP17.18■□□□□ 0.34
SMARCA4-201ENST00000344626 ATL2Q8NHH9 583 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms