RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 ASIC3Q9UHC3 531 aa17.65■□□□□ 0.42
TMEM39B-201ENST00000336294 TSPAN1O60635 241 aa17.65■□□□□ 0.42
TMEM39B-201ENST00000336294 ITIH2P19823 946 aa17.65■□□□□ 0.42
TMEM39B-201ENST00000336294 YY1P25490 414 aa17.65■□□□□ 0.42
TMEM39B-201ENST00000336294 RAD23BP54727 409 aa17.65■□□□□ 0.42
TMEM39B-201ENST00000336294 SLC10A6Q3KNW5 377 aa17.65■□□□□ 0.42
TMEM39B-201ENST00000336294 SDCBP2Q9H190 292 aa17.65■□□□□ 0.42
TMEM39B-201ENST00000336294 EPB41L4BQ9H329 900 aa17.65■□□□□ 0.42
TMEM39B-201ENST00000336294 BCCIPQ9P287 314 aaKnown RBP eCLIP17.65■□□□□ 0.42
TMEM39B-201ENST00000336294 EBAG9O00559 213 aa17.64■□□□□ 0.41
TMEM39B-201ENST00000336294 CDH8P55286 799 aa17.64■□□□□ 0.41
TMEM39B-201ENST00000336294 ZNF252P-AS1Q0IIN9 211 aa17.64■□□□□ 0.41
TMEM39B-201ENST00000336294 NFX1Q12986 1120 aaKnown RBP17.64■□□□□ 0.41
TMEM39B-201ENST00000336294 PDCLQ13371 301 aa17.64■□□□□ 0.41
TMEM39B-201ENST00000336294 MARCH8Q5T0T0 291 aa17.64■□□□□ 0.41
TMEM39B-201ENST00000336294 SPRYD7Q5W111 196 aa17.64■□□□□ 0.41
TMEM39B-201ENST00000336294 NT5DC4Q86YG4 428 aa17.64■□□□□ 0.41
TMEM39B-201ENST00000336294 NIPA2Q8N8Q9 360 aa17.64■□□□□ 0.41
TMEM39B-201ENST00000336294 CXorf38Q8TB03 319 aa17.64■□□□□ 0.41
TMEM39B-201ENST00000336294 SNF8Q96H20 258 aa17.64■□□□□ 0.41
TMEM39B-201ENST00000336294 CCDC114Q96M63 670 aa17.64■□□□□ 0.41
TMEM39B-201ENST00000336294 ACAP3Q96P50 834 aa17.64■□□□□ 0.41
TMEM39B-201ENST00000336294 SMYD3Q9H7B4 428 aa17.64■□□□□ 0.41
TMEM39B-201ENST00000336294 SLC5A4Q9NY91 659 aa17.64■□□□□ 0.41
TMEM39B-201ENST00000336294 ITGA11Q9UKX5 1188 aa17.64■□□□□ 0.41
TMEM39B-201ENST00000336294 R3HDM2Q9Y2K5 976 aaKnown RBP17.64■□□□□ 0.41
TMEM39B-201ENST00000336294 C2CD2Q9Y426 696 aa17.64■□□□□ 0.41
TMEM39B-201ENST00000336294 A0A1B0GUA9 196 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 SLC15A5A6NIM6 579 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 KRT1P04264 644 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 RARGP13631 454 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 COPS2P61201 443 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 CAV1Q03135 178 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 ZFYVE27Q5T4F4 411 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 CYP4A22Q5TCH4 519 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 TTC19Q6DKK2 380 aaPredicted RBP17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 CROCCP2Q86T23 111 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 KIAA0319LQ8IZA0 1049 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 C2orf69Q8N8R5 385 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 BCAS4Q8TDM0 211 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 RNF25Q96BH1 459 aaPredicted RBP17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 DDX56Q9NY93 547 aaKnown RBP17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 RRN3P2A6NIE6 340 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 CILPO75339 1184 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 ATF2P15336 505 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 HPDP32754 393 aaPredicted RBP17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 OGDHQ02218 1023 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 PTPN11Q06124 597 aaPredicted RBP17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 PTPN20Q4JDL3 420 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 ODF2Q5BJF6 829 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 APBB1IPQ7Z5R6 666 aaPredicted RBP17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 SLC4A11Q8NBS3 891 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 TMEM176AQ96HP8 235 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 HPDLQ96IR7 371 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 SLITRK1Q96PX8 696 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 FAM124BQ9H5Z6 455 aaPredicted RBP17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 WDR35Q9P2L0 1181 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 AGAP1Q9UPQ3 857 aa17.63■□□□□ 0.41
TMEM39B-201ENST00000336294 F8VP50 259 aa17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 STAU1O95793 577 aaKnown RBP17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 MDH1P40925 334 aaKnown RBP17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 GRM5P41594 1212 aa17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 GSCP56915 257 aaPredicted RBP17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 RBP5P82980 135 aa17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 LMNB2Q03252 620 aa17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 DCAF4L1Q3SXM0 396 aa17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 B4GALNT4Q76KP1 1039 aa17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 C10orf67Q8IYJ2 551 aa17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 TTC39CQ8N584 583 aa17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 NPLOC4Q8TAT6 608 aa17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 PPM1EQ8WY54 764 aa17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 ELOVL4Q9GZR5 314 aa17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 SEMA4AQ9H3S1 761 aa17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 KLHL11Q9NVR0 708 aa17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 DPP3Q9NY33 737 aa17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 NOVA2Q9UNW9 492 aaKnown RBP17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 ZNF236Q9UL36 1845 aa17.62■□□□□ 0.41
TMEM39B-201ENST00000336294 SIGLEC16A6NMB1 481 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 TJP3O95049 919 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 SHBGP04278 402 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 TCF4P15884 667 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 PTPN7P35236 360 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 CDC42EP1Q00587 391 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 SLC29A2Q14542 456 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 ZNF365Q70YC5 407 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 TRMT10CQ7L0Y3 403 aaKnown RBP17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 BBOF1Q8ND07 529 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 SYNCQ9H7C4 482 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 PI4K2BG5E9Z4 385 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 GOLGA8SH3BPF8 625 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 RIPK2O43353 540 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 CPP00450 1065 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 VDRP11473 427 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 KRT3P12035 628 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 PSMA2P25787 234 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 IVDP26440 423 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 PSMC1P62191 440 aaKnown RBP17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 PPP2R2AP63151 447 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 GUCY1A3Q02108 690 aa17.61■□□□□ 0.41
TMEM39B-201ENST00000336294 ATP13A4Q4VNC1 1196 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms