RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 MKNK1Q9BUB5 465 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 IMPAD1Q9NX62 359 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 NCAPD2Q15021 1401 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 ANKARQ7Z5J8 1434 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 ATMINO43313 823 aaPredicted RBP14.26□□□□□ -0.13
CLCN6-201ENST00000312413 NBNO60934 754 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 ELOA2Q8IYF1 753 aaPredicted RBP14.26□□□□□ -0.13
CLCN6-201ENST00000312413 TPCN2Q8NHX9 752 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 URGCPQ8TCY9 931 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 EFCAB1Q9HAE3 211 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 SLC39A10Q9ULF5 831 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 EEF2KO00418 725 aaKnown RBP14.26□□□□□ -0.13
CLCN6-201ENST00000312413 RBP5P82980 135 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 FASTKD5Q7L8L6 764 aaKnown RBP14.26□□□□□ -0.13
CLCN6-201ENST00000312413 VPS37AQ8NEZ2 397 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 METP08581 1390 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.26□□□□□ -0.13
CLCN6-201ENST00000312413 MYBP10242 640 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 CALB2P22676 271 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 GPR162Q16538 588 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 ZNF677Q86XU0 584 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.26□□□□□ -0.13
CLCN6-201ENST00000312413 ZNF669Q96BR6 464 aaPredicted RBP14.26□□□□□ -0.13
CLCN6-201ENST00000312413 NBPF26B4DH59 902 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 TBX3O15119 743 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 P4HA2O15460 535 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 FDX1P10109 184 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 LRRC6Q86X45 466 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 NBPF15Q8N660 670 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 ANKRD27Q96NW4 1050 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 TFR2Q9UP52 801 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 PLAGL2Q9UPG8 496 aa14.26□□□□□ -0.13
CLCN6-201ENST00000312413 ADGRA2Q96PE1 1338 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 ZNF839A8K0R7 811 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 TCF3P15923 654 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 PRLRP16471 622 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 IGDCC4Q8TDY8 1250 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 PYGMP11217 842 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 RGS4P49798 205 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 PTK6Q13882 451 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 SF3B3Q15393 1217 aaKnown RBP14.25□□□□□ -0.13
CLCN6-201ENST00000312413 FAM71DQ8N9W8 422 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 SPATA33Q96N06 139 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 ACAD9Q9H845 621 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 FAM153AQ9UHL3 310 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 SNX9Q9Y5X1 595 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 GLRA3O75311 464 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 SNUPNO95149 360 aaKnown RBP14.25□□□□□ -0.13
CLCN6-201ENST00000312413 ZNF23P17027 643 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 KCNMA1Q12791 1236 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 OASLQ15646 514 aaKnown RBP14.25□□□□□ -0.13
CLCN6-201ENST00000312413 NAIF1Q69YI7 327 aaPredicted RBP14.25□□□□□ -0.13
CLCN6-201ENST00000312413 TBC1D19Q8N5T2 526 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 APPL2Q8NEU8 664 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 CASP10Q92851 521 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 SOX13Q9UN79 622 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 SNX13Q9Y5W8 968 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 ADGRA3Q8IWK6 1321 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 CYTH3O43739 400 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 SOX6P35712 828 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 FEZF2Q8TBJ5 459 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 NMD3Q96D46 503 aaKnown RBP14.25□□□□□ -0.13
CLCN6-201ENST00000312413 HES6Q96HZ4 224 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 FOPNLQ96NB1 174 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 ZSWIM1Q9BR11 485 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 KLHL4Q9C0H6 718 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 SESN1Q9Y6P5 492 aa14.25□□□□□ -0.13
CLCN6-201ENST00000312413 PPP1R3GB7ZBB8 358 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 FKBP6O75344 327 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 RARGP13631 454 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 CACNB2Q08289 660 aaPredicted RBP14.24□□□□□ -0.13
CLCN6-201ENST00000312413 WASHC5Q12768 1159 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 MAPRE1Q15691 268 aaKnown RBP14.24□□□□□ -0.13
CLCN6-201ENST00000312413 SYTL3Q4VX76 610 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 BNC2Q6ZN30 1099 aaPredicted RBP14.24□□□□□ -0.13
CLCN6-201ENST00000312413 RTKN2Q8IZC4 609 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 PABPC5Q96DU9 382 aaKnown RBP14.24□□□□□ -0.13
CLCN6-201ENST00000312413 JPH1Q9HDC5 661 aaPredicted RBP14.24□□□□□ -0.13
CLCN6-201ENST00000312413 GTF3C4Q9UKN8 822 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 GUCA1CO95843 209 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 PTGER2P43116 358 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 GTF2H3Q13889 308 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 ANGPT1Q15389 498 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 FAM83EQ2M2I3 478 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 C12orf60Q5U649 245 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 IZUMO2Q6UXV1 221 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 SYNE4Q8N205 404 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 GLMNQ92990 594 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 MAML3Q96JK9 1138 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 SIKE1Q9BRV8 207 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 EPS8L2Q9H6S3 715 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 TMEM8AQ9HCN3 771 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 KANSL1LA0AUZ9 987 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 H0YC42 278 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 EIF3DO15371 548 aaKnown RBP eCLIP14.24□□□□□ -0.13
CLCN6-201ENST00000312413 MTSS1O43312 755 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 STIP1P31948 543 aaKnown RBP14.24□□□□□ -0.13
CLCN6-201ENST00000312413 PLEKHA7Q6IQ23 1121 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 LDHDQ86WU2 507 aa14.24□□□□□ -0.13
CLCN6-201ENST00000312413 SLC10A4Q96EP9 437 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms