RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 RIN2Q8WYP3 895 aaPredicted RBP22.66■■□□□ 1.22
SOX17-201ENST00000297316 AGO3Q9H9G7 860 aaKnown RBP22.66■■□□□ 1.22
SOX17-201ENST00000297316 SMIM28A0A1B0GU29 152 aa22.66■■□□□ 1.22
SOX17-201ENST00000297316 AGPSO00116 658 aa22.66■■□□□ 1.22
SOX17-201ENST00000297316 INHAP05111 366 aa22.66■■□□□ 1.22
SOX17-201ENST00000297316 MYBL1P10243 752 aa22.66■■□□□ 1.22
SOX17-201ENST00000297316 EMBQ6PCB8 327 aa22.66■■□□□ 1.22
SOX17-201ENST00000297316 SESTD1Q86VW0 696 aa22.66■■□□□ 1.22
SOX17-201ENST00000297316 WDTC1Q8N5D0 677 aa22.66■■□□□ 1.22
SOX17-201ENST00000297316 SLC4A11Q8NBS3 891 aa22.66■■□□□ 1.22
SOX17-201ENST00000297316 CAVIN3Q969G5 261 aa22.66■■□□□ 1.22
SOX17-201ENST00000297316 MGAT3Q09327 533 aa22.65■■□□□ 1.22
SOX17-201ENST00000297316 ITGA7Q13683 1181 aa22.65■■□□□ 1.22
SOX17-201ENST00000297316 RSPH3Q86UC2 560 aa22.65■■□□□ 1.22
SOX17-201ENST00000297316 TRIM11Q96F44 468 aa22.65■■□□□ 1.22
SOX17-201ENST00000297316 SLITRK6Q9H5Y7 841 aa22.65■■□□□ 1.22
SOX17-201ENST00000297316 CCDC66A2RUB6 948 aa22.65■■□□□ 1.22
SOX17-201ENST00000297316 CILPO75339 1184 aa22.65■■□□□ 1.22
SOX17-201ENST00000297316 SYF2O95926 243 aaKnown RBP22.65■■□□□ 1.22
SOX17-201ENST00000297316 AARSP49588 968 aaKnown RBP eCLIP22.65■■□□□ 1.22
SOX17-201ENST00000297316 ACLYP53396 1101 aa22.65■■□□□ 1.22
SOX17-201ENST00000297316 SOX4Q06945 474 aaPredicted RBP22.65■■□□□ 1.22
SOX17-201ENST00000297316 PAK2Q13177 524 aa22.65■■□□□ 1.22
SOX17-201ENST00000297316 LLGL1Q15334 1064 aa22.65■■□□□ 1.22
SOX17-201ENST00000297316 DENND1BQ6P3S1 775 aa22.65■■□□□ 1.22
SOX17-201ENST00000297316 PCSK9Q8NBP7 692 aaKnown RBP22.65■■□□□ 1.22
SOX17-201ENST00000297316 NEUROG2Q9H2A3 272 aa22.65■■□□□ 1.22
SOX17-201ENST00000297316 MAMLD1Q13495 774 aa22.64■■□□□ 1.22
SOX17-201ENST00000297316 ZFP42Q96MM3 310 aa22.64■■□□□ 1.22
SOX17-201ENST00000297316 TRIM51Q9BSJ1 452 aa22.64■■□□□ 1.22
SOX17-201ENST00000297316 DERAQ9Y315 318 aa22.64■■□□□ 1.22
SOX17-201ENST00000297316 O00370 1275 aa22.64■■□□□ 1.21
SOX17-201ENST00000297316 YY1P25490 414 aa22.64■■□□□ 1.21
SOX17-201ENST00000297316 YWHAEP62258 255 aaKnown RBP22.64■■□□□ 1.21
SOX17-201ENST00000297316 RNF180Q86T96 592 aa22.64■■□□□ 1.21
SOX17-201ENST00000297316 PRELID2Q8N945 189 aa22.64■■□□□ 1.21
SOX17-201ENST00000297316 BEST2Q8NFU1 509 aa22.64■■□□□ 1.21
SOX17-201ENST00000297316 PXYLP1Q8TE99 480 aa22.64■■□□□ 1.21
SOX17-201ENST00000297316 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.64■■□□□ 1.21
SOX17-201ENST00000297316 SNX9Q9Y5X1 595 aa22.64■■□□□ 1.21
SOX17-201ENST00000297316 C9orf57Q5W0N0 161 aa22.63■■□□□ 1.21
SOX17-201ENST00000297316 PLEKHA7Q6IQ23 1121 aa22.63■■□□□ 1.21
SOX17-201ENST00000297316 DPH6Q7L8W6 267 aa22.63■■□□□ 1.21
SOX17-201ENST00000297316 FAN1Q9Y2M0 1017 aa22.63■■□□□ 1.21
SOX17-201ENST00000297316 GHRP10912 638 aa22.63■■□□□ 1.21
SOX17-201ENST00000297316 IBSPP21815 317 aaPredicted RBP22.63■■□□□ 1.21
SOX17-201ENST00000297316 MMP8P22894 467 aa22.63■■□□□ 1.21
SOX17-201ENST00000297316 GGCXP38435 758 aa22.63■■□□□ 1.21
SOX17-201ENST00000297316 AFF1P51825 1210 aaKnown RBP22.63■■□□□ 1.21
SOX17-201ENST00000297316 NDST1P52848 882 aa22.63■■□□□ 1.21
SOX17-201ENST00000297316 SEL1L2Q5TEA6 688 aa22.63■■□□□ 1.21
SOX17-201ENST00000297316 LHX8Q68G74 356 aa22.63■■□□□ 1.21
SOX17-201ENST00000297316 LPPQ93052 612 aa22.63■■□□□ 1.21
SOX17-201ENST00000297316 NAP1L3Q99457 506 aaPredicted RBP22.63■■□□□ 1.21
SOX17-201ENST00000297316 MRPL45Q9BRJ2 306 aaKnown RBP22.63■■□□□ 1.21
SOX17-201ENST00000297316 CACNG4Q9UBN1 327 aa22.63■■□□□ 1.21
SOX17-201ENST00000297316 TJP2Q9UDY2 1190 aa22.63■■□□□ 1.21
SOX17-201ENST00000297316 CYTH4Q9UIA0 394 aa22.63■■□□□ 1.21
SOX17-201ENST00000297316 NME7Q9Y5B8 376 aa22.63■■□□□ 1.21
SOX17-201ENST00000297316 FKTNO75072 461 aa22.62■■□□□ 1.21
SOX17-201ENST00000297316 CD52P31358 61 aa22.62■■□□□ 1.21
SOX17-201ENST00000297316 RWDD2BP57060 319 aa22.62■■□□□ 1.21
SOX17-201ENST00000297316 PTPN11Q06124 597 aaPredicted RBP22.62■■□□□ 1.21
SOX17-201ENST00000297316 C1QBPQ07021 282 aaKnown RBP22.62■■□□□ 1.21
SOX17-201ENST00000297316 GPS2Q13227 327 aa22.62■■□□□ 1.21
SOX17-201ENST00000297316 LIN9Q5TKA1 542 aa22.62■■□□□ 1.21
SOX17-201ENST00000297316 C18orf8Q96DM3 657 aa22.62■■□□□ 1.21
SOX17-201ENST00000297316 TMEM176AQ96HP8 235 aa22.62■■□□□ 1.21
SOX17-201ENST00000297316 CYP3A43Q9HB55 503 aa22.62■■□□□ 1.21
SOX17-201ENST00000297316 FRMPD3Q5JV73 1810 aa22.62■■□□□ 1.21
SOX17-201ENST00000297316 MYO1FO00160 1098 aa22.62■■□□□ 1.21
SOX17-201ENST00000297316 DAPK3O43293 454 aa22.62■■□□□ 1.21
SOX17-201ENST00000297316 HCRTO43612 131 aa22.62■■□□□ 1.21
SOX17-201ENST00000297316 STAU1O95793 577 aaKnown RBP22.62■■□□□ 1.21
SOX17-201ENST00000297316 P4HA1P13674 534 aa22.62■■□□□ 1.21
SOX17-201ENST00000297316 IGFBP6P24592 240 aaPredicted RBP22.62■■□□□ 1.21
SOX17-201ENST00000297316 MYO1EQ12965 1108 aa22.62■■□□□ 1.21
SOX17-201ENST00000297316 SIX1Q15475 284 aaPredicted RBP22.62■■□□□ 1.21
SOX17-201ENST00000297316 XKR4Q5GH76 650 aa22.62■■□□□ 1.21
SOX17-201ENST00000297316 SLC13A5Q86YT5 568 aaPredicted RBP22.62■■□□□ 1.21
SOX17-201ENST00000297316 VCPIP1Q96JH7 1222 aa22.62■■□□□ 1.21
SOX17-201ENST00000297316 ACBD3Q9H3P7 528 aa22.62■■□□□ 1.21
SOX17-201ENST00000297316 UBQLN1Q9UMX0 589 aaKnown RBP22.62■■□□□ 1.21
SOX17-201ENST00000297316 PCDHGC3Q9UN70 934 aa22.62■■□□□ 1.21
SOX17-201ENST00000297316 PTGESO14684 152 aa22.61■■□□□ 1.21
SOX17-201ENST00000297316 SPTLC1O15269 473 aa22.61■■□□□ 1.21
SOX17-201ENST00000297316 TLR3O15455 904 aaKnown RBP22.61■■□□□ 1.21
SOX17-201ENST00000297316 PROSCO94903 275 aa22.61■■□□□ 1.21
SOX17-201ENST00000297316 MYCP01106 439 aaPredicted RBP22.61■■□□□ 1.21
SOX17-201ENST00000297316 CYP4A22Q5TCH4 519 aa22.61■■□□□ 1.21
SOX17-201ENST00000297316 TTC27Q6P3X3 843 aa22.61■■□□□ 1.21
SOX17-201ENST00000297316 CCDC26Q8TAB7 109 aa22.61■■□□□ 1.21
SOX17-201ENST00000297316 BARX2Q9UMQ3 279 aaPredicted RBP22.61■■□□□ 1.21
SOX17-201ENST00000297316 PTCH2Q9Y6C5 1203 aa22.61■■□□□ 1.21
SOX17-201ENST00000297316 RPL7AP62424 266 aaKnown RBP22.6■■□□□ 1.21
SOX17-201ENST00000297316 NNTQ13423 1086 aa22.6■■□□□ 1.21
SOX17-201ENST00000297316 MAATS1Q7Z4T9 603 aa22.6■■□□□ 1.21
SOX17-201ENST00000297316 C12orf29Q8N999 325 aa22.6■■□□□ 1.21
SOX17-201ENST00000297316 TMEM35BQ8NCS4 154 aa22.6■■□□□ 1.21
SOX17-201ENST00000297316 HEXIM2Q96MH2 286 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms