RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 PQBP1O60828 265 aaKnown RBP22.26■■□□□ 1.15
YBX3-202ENST00000279550 GJB6O95452 261 aa22.26■■□□□ 1.15
YBX3-202ENST00000279550 COL6A1P12109 1028 aa22.26■■□□□ 1.15
YBX3-202ENST00000279550 CD52P31358 61 aa22.26■■□□□ 1.15
YBX3-202ENST00000279550 CDH8P55286 799 aa22.26■■□□□ 1.15
YBX3-202ENST00000279550 PAK2Q13177 524 aa22.26■■□□□ 1.15
YBX3-202ENST00000279550 TMEM132DQ14C87 1099 aa22.26■■□□□ 1.15
YBX3-202ENST00000279550 IFT20Q8IY31 132 aa22.26■■□□□ 1.15
YBX3-202ENST00000279550 ANKLE1Q8NAG6 615 aa22.26■■□□□ 1.15
YBX3-202ENST00000279550 DIS3LQ8TF46 1054 aaKnown RBP22.26■■□□□ 1.15
YBX3-202ENST00000279550 SMYD3Q9H7B4 428 aa22.26■■□□□ 1.15
YBX3-202ENST00000279550 CHST12Q9NRB3 414 aa22.26■■□□□ 1.15
YBX3-202ENST00000279550 SNTG2Q9NY99 539 aa22.26■■□□□ 1.15
YBX3-202ENST00000279550 HPCAL4Q9UM19 191 aa22.26■■□□□ 1.15
YBX3-202ENST00000279550 PCDHA3Q9Y5H8 950 aa22.26■■□□□ 1.15
YBX3-202ENST00000279550 PYGMP11217 842 aa22.26■■□□□ 1.15
YBX3-202ENST00000279550 OAS2P29728 719 aaKnown RBP22.26■■□□□ 1.15
YBX3-202ENST00000279550 ZNF667Q5HYK9 610 aa22.26■■□□□ 1.15
YBX3-202ENST00000279550 LIN9Q5TKA1 542 aa22.26■■□□□ 1.15
YBX3-202ENST00000279550 SND1Q7KZF4 910 aaKnown RBP eCLIP22.26■■□□□ 1.15
YBX3-202ENST00000279550 ANKRD33Q7Z3H0 272 aa22.26■■□□□ 1.15
YBX3-202ENST00000279550 HES2Q9Y543 173 aa22.26■■□□□ 1.15
YBX3-202ENST00000279550 POLR2BP30876 1174 aaKnown RBP22.25■■□□□ 1.15
YBX3-202ENST00000279550 C1QBPQ07021 282 aaKnown RBP22.25■■□□□ 1.15
YBX3-202ENST00000279550 BFSP2Q13515 415 aa22.25■■□□□ 1.15
YBX3-202ENST00000279550 C1orf131Q8NDD1 294 aaKnown RBP22.25■■□□□ 1.15
YBX3-202ENST00000279550 NFU1Q9UMS0 254 aa22.25■■□□□ 1.15
YBX3-202ENST00000279550 ORC1Q13415 861 aa22.24■■□□□ 1.15
YBX3-202ENST00000279550 MAMLD1Q13495 774 aa22.24■■□□□ 1.15
YBX3-202ENST00000279550 WDR72Q3MJ13 1102 aa22.24■■□□□ 1.15
YBX3-202ENST00000279550 PLEKHA7Q6IQ23 1121 aa22.24■■□□□ 1.15
YBX3-202ENST00000279550 ZDHHC14Q8IZN3 488 aa22.24■■□□□ 1.15
YBX3-202ENST00000279550 WDTC1Q8N5D0 677 aa22.24■■□□□ 1.15
YBX3-202ENST00000279550 IFT81Q8WYA0 676 aa22.24■■□□□ 1.15
YBX3-202ENST00000279550 VCPIP1Q96JH7 1222 aa22.24■■□□□ 1.15
YBX3-202ENST00000279550 HMGXB4Q9UGU5 601 aa22.24■■□□□ 1.15
YBX3-202ENST00000279550 AMACRQ9UHK6 382 aa22.24■■□□□ 1.15
YBX3-202ENST00000279550 MKI67P46013 3256 aaKnown RBP22.24■■□□□ 1.15
YBX3-202ENST00000279550 CCDC66A2RUB6 948 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 TLR3O15455 904 aaKnown RBP22.23■■□□□ 1.15
YBX3-202ENST00000279550 FAM153BP0C7A2 387 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 MMP8P22894 467 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 EPHB4P54760 987 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 YWHAEP62258 255 aaKnown RBP22.23■■□□□ 1.15
YBX3-202ENST00000279550 MBTPS1Q14703 1052 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 FAM153CQ494X1 144 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 C1orf53Q5VUE5 145 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 DENND1BQ6P3S1 775 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 LRRC8DQ7L1W4 858 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 WHAMMQ8TF30 809 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 TWNKQ96RR1 684 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 SLITRK6Q9H5Y7 841 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 VIPAS39Q9H9C1 493 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 PLEKHA5Q9HAU0 1116 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 PRDM10Q9NQV6 1147 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 FAM153AQ9UHL3 310 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 AGAP1Q9UPQ3 857 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 IPPQ9Y573 584 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 TCRBV7S2A1N4TA0A589 114 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 PITPNM1O00562 1244 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 RECQL4O94761 1208 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 LSM8O95777 96 aaKnown RBP22.23■■□□□ 1.15
YBX3-202ENST00000279550 SELPP16109 830 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 YARSP54577 528 aaKnown RBP22.23■■□□□ 1.15
YBX3-202ENST00000279550 RAD23BP54727 409 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 DAB2IPQ5VWQ8 1189 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 CD302Q8IX05 232 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 SMG8Q8ND04 991 aaKnown RBP22.23■■□□□ 1.15
YBX3-202ENST00000279550 SNX27Q96L92 541 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 ELOVL4Q9GZR5 314 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 DPP3Q9NY33 737 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 PCDHGC3Q9UN70 934 aa22.23■■□□□ 1.15
YBX3-202ENST00000279550 TTI1O43156 1089 aa22.22■■□□□ 1.15
YBX3-202ENST00000279550 PROSCO94903 275 aa22.22■■□□□ 1.15
YBX3-202ENST00000279550 TSEN2Q8NCE0 465 aaKnown RBP22.22■■□□□ 1.15
YBX3-202ENST00000279550 CAVIN3Q969G5 261 aa22.22■■□□□ 1.15
YBX3-202ENST00000279550 KIF12Q96FN5 646 aa22.22■■□□□ 1.15
YBX3-202ENST00000279550 HPDLQ96IR7 371 aa22.22■■□□□ 1.15
YBX3-202ENST00000279550 TOX2Q96NM4 488 aa22.22■■□□□ 1.15
YBX3-202ENST00000279550 NAP1L3Q99457 506 aaPredicted RBP22.22■■□□□ 1.15
YBX3-202ENST00000279550 TMEM106CQ9BVX2 250 aa22.22■■□□□ 1.15
YBX3-202ENST00000279550 APOL6Q9BWW8 343 aa22.22■■□□□ 1.15
YBX3-202ENST00000279550 VRTNQ9H8Y1 702 aa22.22■■□□□ 1.15
YBX3-202ENST00000279550 FAM105AQ9NUU6 356 aa22.22■■□□□ 1.15
YBX3-202ENST00000279550 C2CD2Q9Y426 696 aa22.22■■□□□ 1.15
YBX3-202ENST00000279550 RALGAPA2Q2PPJ7 1873 aa22.22■■□□□ 1.15
YBX3-202ENST00000279550 CITO14578 2027 aa22.21■■□□□ 1.15
YBX3-202ENST00000279550 DCDC2CA8MYV0 355 aa22.21■■□□□ 1.15
YBX3-202ENST00000279550 POLR3GO15318 223 aaPredicted RBP22.21■■□□□ 1.15
YBX3-202ENST00000279550 AKAP5P24588 427 aa22.21■■□□□ 1.15
YBX3-202ENST00000279550 ATICP31939 592 aa22.21■■□□□ 1.15
YBX3-202ENST00000279550 CDH5P33151 784 aaPredicted RBP22.21■■□□□ 1.15
YBX3-202ENST00000279550 RWDD2BP57060 319 aa22.21■■□□□ 1.15
YBX3-202ENST00000279550 TRIM60Q495X7 471 aa22.21■■□□□ 1.15
YBX3-202ENST00000279550 SEL1L2Q5TEA6 688 aa22.21■■□□□ 1.15
YBX3-202ENST00000279550 EMBQ6PCB8 327 aa22.21■■□□□ 1.15
YBX3-202ENST00000279550 DDX42Q86XP3 938 aaKnown RBP eCLIP22.21■■□□□ 1.15
YBX3-202ENST00000279550 PRELID2Q8N945 189 aa22.21■■□□□ 1.15
YBX3-202ENST00000279550 SLC4A11Q8NBS3 891 aa22.21■■□□□ 1.15
YBX3-202ENST00000279550 UBE2Q2Q8WVN8 375 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms