RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 PALM2Q8IXS6 379 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 GALNT15Q8N3T1 639 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 CFAP61Q8NHU2 1237 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 NMUR2Q9GZQ4 415 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 CHMP2BQ9UQN3 213 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 PCDHB4Q9Y5E5 795 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.58□□□□□ -0.23
COL8A1-202ENST00000273342 SIGLEC16A6NMB1 481 aa13.58□□□□□ -0.23
COL8A1-202ENST00000273342 E5RJQ4 531 aa13.58□□□□□ -0.23
COL8A1-202ENST00000273342 MAP3K7O43318 606 aa13.58□□□□□ -0.23
COL8A1-202ENST00000273342 RPS6KA3P51812 740 aa13.58□□□□□ -0.23
COL8A1-202ENST00000273342 GEMIN4P57678 1058 aaKnown RBP13.58□□□□□ -0.23
COL8A1-202ENST00000273342 IRGCQ6NXR0 463 aa13.58□□□□□ -0.23
COL8A1-202ENST00000273342 FAM43BQ6ZT52 329 aaPredicted RBP13.58□□□□□ -0.23
COL8A1-202ENST00000273342 FBXO36Q8NEA4 188 aa13.58□□□□□ -0.23
COL8A1-202ENST00000273342 CSRNP1Q96S65 589 aa13.58□□□□□ -0.23
COL8A1-202ENST00000273342 ZWILCHQ9H900 591 aa13.58□□□□□ -0.23
COL8A1-202ENST00000273342 TBX20Q9UMR3 447 aa13.58□□□□□ -0.23
COL8A1-202ENST00000273342 ASB3Q9Y575 518 aa13.58□□□□□ -0.23
COL8A1-202ENST00000273342 CLUHO75153 1309 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 KLHL33A6NCF5 533 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 TCP10L2B9ZVM9 353 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 ATP2A1O14983 1001 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 LPXNO60711 386 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 FAM155BO75949 473 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 P4HBP07237 508 aaKnown RBP13.58□□□□□ -0.24
COL8A1-202ENST00000273342 SLC1A1P43005 524 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 NPTX2P47972 431 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 ARL4CP56559 192 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 IRX4P78413 519 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 RIBC1Q8N443 379 aaPredicted RBP13.58□□□□□ -0.24
COL8A1-202ENST00000273342 HIPK4Q8NE63 616 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 MCEEQ96PE7 176 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 CYLDQ9NQC7 956 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 KRT82Q9NSB4 513 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 PCMTD2Q9NV79 361 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 TJP3O95049 919 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 EIF2AK2P19525 551 aaKnown RBP13.58□□□□□ -0.24
COL8A1-202ENST00000273342 GPC3P51654 580 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 LBRQ14739 615 aaKnown RBP13.58□□□□□ -0.24
COL8A1-202ENST00000273342 SMAD1Q15797 465 aaKnown RBP13.58□□□□□ -0.24
COL8A1-202ENST00000273342 BRDTQ58F21 947 aaPredicted RBP13.58□□□□□ -0.24
COL8A1-202ENST00000273342 LIN9Q5TKA1 542 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 IZUMO2Q6UXV1 221 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 BSNDQ8WZ55 320 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 ZNF516Q92618 1163 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 GMCL1Q96IK5 515 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 THTPAQ9BU02 230 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 SHCBP1LQ9BZQ2 653 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 COL20A1Q9P218 1284 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 PPARGC1AQ9UBK2 798 aaKnown RBP13.58□□□□□ -0.24
COL8A1-202ENST00000273342 RABGEF1Q9UJ41 708 aa13.58□□□□□ -0.24
COL8A1-202ENST00000273342 G3BP2Q9UN86 482 aaKnown RBP13.58□□□□□ -0.24
COL8A1-202ENST00000273342 FCHO1O14526 889 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 QARSP47897 775 aaKnown RBP13.57□□□□□ -0.24
COL8A1-202ENST00000273342 BASP1P80723 227 aaKnown RBP13.57□□□□□ -0.24
COL8A1-202ENST00000273342 GTF2BQ00403 316 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 LAMB3Q13751 1172 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 CFAP157Q5JU67 520 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 SLC39A4Q6P5W5 647 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 DCUN1D2Q6PH85 259 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 LRRN4Q8WUT4 740 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 VTI1AQ96AJ9 217 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 PTCD3Q96EY7 689 aaKnown RBP13.57□□□□□ -0.24
COL8A1-202ENST00000273342 KMT5AQ9NQR1 393 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 MEI4A8MW99 385 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 NFIBO00712 420 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 MT-ND3P03897 115 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 ABHD2P08910 425 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 PYGBP11216 843 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 GNA15P30679 374 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 PSMC5P62195 406 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 CRY2Q49AN0 593 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 MON1BQ7L1V2 547 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 MFN1Q8IWA4 741 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 SH3TC2Q8TF17 1288 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 ANKRD27Q96NW4 1050 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 MXRA8Q9BRK3 442 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 GLIS2Q9BZE0 524 aaPredicted RBP13.57□□□□□ -0.24
COL8A1-202ENST00000273342 SYNCQ9H7C4 482 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 KCND2Q9NZV8 630 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 AGTPBP1Q9UPW5 1226 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 PCDHB2Q9Y5E7 798 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 ADAMTSL1Q8N6G6 1762 aa13.57□□□□□ -0.24
COL8A1-202ENST00000273342 ALOX15BO15296 676 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 AVILO75366 819 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 RTN3O95197 1032 aaPredicted RBP13.56□□□□□ -0.24
COL8A1-202ENST00000273342 LMNAP02545 664 aaKnown RBP13.56□□□□□ -0.24
COL8A1-202ENST00000273342 VIL1P09327 827 aaKnown RBP13.56□□□□□ -0.24
COL8A1-202ENST00000273342 GCLCP48506 637 aaPredicted RBP13.56□□□□□ -0.24
COL8A1-202ENST00000273342 RASA2Q15283 850 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 WDR44Q5JSH3 913 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 RNASEH2BQ5TBB1 312 aaKnown RBP13.56□□□□□ -0.24
COL8A1-202ENST00000273342 CYP4A22Q5TCH4 519 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 LDHDQ86WU2 507 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 CTAGE3PQ8IX95 158 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 ALLCQ8N6M5 410 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 JDP2Q8WYK2 163 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 SERAC1Q96JX3 654 aa13.56□□□□□ -0.24
COL8A1-202ENST00000273342 TTC25Q96NG3 672 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms