RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 BccipQ9CWI3 316 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Fam174aQ9D3L0 190 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 CabyrQ9D424 453 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Serpinb12Q9D7P9 423 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Pak1ip1Q9DCE5 382 aaKnown RBP13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Rilpl1Q9JJC6 406 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 PrebQ9WUQ2 417 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Sept5Q9Z2Q6 369 aa13.09□□□□□ -0.31
Ccdc28b-202ENSMUST00000106035 Olfr1354E9Q5G9 310 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 1700113H08RikE9Q9Q5 327 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Gimap9G3X987 291 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 DxoO70348 397 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Ctnnal1O88327 731 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 GcP21614 476 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Klf1P46099 358 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Rpl13P47963 211 aaKnown RBP13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Hspa4lP48722 838 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Shmt1P50431 478 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Gabrr2P56476 465 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Abi2P62484 446 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Tmem109Q3UBX0 243 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Eif2b4Q61749 524 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 RbfaQ6P3B9 350 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 DstykQ6XUX1 927 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Pi15Q8BS03 258 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Mettl3Q8C3P7 580 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Pde5aQ8CG03 865 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 TrabdQ99JY4 376 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Snw1Q9CSN1 536 aaKnown RBP13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Lrrc17Q9CXD9 443 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 CoasyQ9DBL7 563 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Ndufa8Q9DCJ5 172 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Timp4Q9JHB3 224 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Trpc3Q9QZC1 836 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Adamts5Q9R001 930 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 NcdnQ9Z0E0 729 aa13.08□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Pi4kaE9Q3L2 2105 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Vmn2r63E9Q0K5 859 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Gm9268E9Q0M3 861 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Vmn2r62K7N712 859 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Fam167bP17257 162 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 PpardP35396 440 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Folr1P35846 255 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Pstpip1P97814 415 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Krt80Q0VBK2 452 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 4933416C03RikQ3V063 378 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Pik3r5Q5SW28 871 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Runx3Q64131 409 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 OcrlQ6NVF0 900 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Zfp251Q6PCX8 632 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Jade2Q6ZQF7 829 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Cfap100Q80VN0 613 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Crybg3Q80W49 1005 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Zdhhc19Q810M5 347 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Lrfn3Q8BLY3 626 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Rapgef5Q8C0Q9 814 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Cstf2tQ8C7E9 632 aaKnown RBP13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Cacnb2Q8CC27 655 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Ccdc38Q8CDN8 563 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Mrpl38Q8K2M0 380 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Rhobtb3Q9CTN4 611 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Galnt15Q9D2N8 638 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Mss51Q9D5Z5 446 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Rassf7Q9DD19 359 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Rfx5Q9JL61 658 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Rtl9Q32KG4 1339 aa13.07□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Olfr391-psA0A0U1RNJ4 312 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Mindy4b-psA0A1W2P7H6 457 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Pcsk6F6XJP7 959 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Sema4dO09126 861 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Hes2O54792 157 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 P01652 108 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 PfklP12382 780 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 SrgnP13609 152 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Tnnc1P19123 161 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Lmo2P25801 158 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Lbx1P52955 282 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Myl6Q60605 151 aaKnown RBP13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Rbm12b2Q66JV4 834 aaKnown RBP13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Styk1Q6J9G1 429 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Ints8Q80V86 995 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Bank1Q80VH0 783 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Tmem169Q8BG50 297 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Chtf18Q8BIW9 969 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Myt1Q8CFC2 1127 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Tmprss4Q8VCA5 435 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Taf12Q8VE65 161 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Ppp1r3aQ99MR9 1089 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Kif17Q99PW8 1038 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 ArskQ9D2L1 553 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Adam23Q9R1V7 829 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Uchl5Q9WUP7 329 aa13.06□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Sycp2lA0A0M3U1B0 842 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Gm45208A0A140LJ36 292 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Cyp2j7A0A140T8U1 504 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Olfr1023A2ASU6 311 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Rabgap1lA6H6A9 815 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Gm5160F8VPN3 147 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Cd160O88875 185 aa13.05□□□□□ -0.32
Ccdc28b-202ENSMUST00000106035 Abcb1bP06795 1276 aa13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 64.8 ms